RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 KRI1Q8N9T8 703 aaKnown RBP11.62□□□□□ -0.55
PTPN12-214ENST00000520947 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
PTPN12-214ENST00000520947 IRF6O14896 467 aa11.61□□□□□ -0.55
PTPN12-214ENST00000520947 PHOX2BQ99453 314 aa11.61□□□□□ -0.55
PTPN12-214ENST00000520947 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
PTPN12-214ENST00000520947 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-214ENST00000520947 ZMYND10O75800 440 aa11.59□□□□□ -0.55
PTPN12-214ENST00000520947 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
PTPN12-214ENST00000520947 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
PTPN12-214ENST00000520947 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
PTPN12-214ENST00000520947 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
PTPN12-214ENST00000520947 APLP1P51693 650 aa11.52□□□□□ -0.57
PTPN12-214ENST00000520947 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.57
PTPN12-214ENST00000520947 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-214ENST00000520947 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
PTPN12-214ENST00000520947 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
PTPN12-214ENST00000520947 SLC10A3P09131 477 aa11.5□□□□□ -0.57
PTPN12-214ENST00000520947 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
PTPN12-214ENST00000520947 CFHP08603 1231 aa11.47□□□□□ -0.57
PTPN12-214ENST00000520947 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.57
PTPN12-214ENST00000520947 RSPH4AQ5TD94 716 aa11.45□□□□□ -0.58
PTPN12-214ENST00000520947 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
PTPN12-214ENST00000520947 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
PTPN12-214ENST00000520947 IFFO2Q5TF58 517 aa11.43□□□□□ -0.58
PTPN12-214ENST00000520947 AK7Q96M32 723 aa11.43□□□□□ -0.58
PTPN12-214ENST00000520947 MTRQ99707 1265 aa11.43□□□□□ -0.58
PTPN12-214ENST00000520947 PRR14Q9BWN1 585 aa11.43□□□□□ -0.58
PTPN12-214ENST00000520947 CLCN1P35523 988 aa11.42□□□□□ -0.58
PTPN12-214ENST00000520947 COPS2P61201 443 aa11.42□□□□□ -0.58
PTPN12-214ENST00000520947 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
PTPN12-214ENST00000520947 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
PTPN12-214ENST00000520947 TRIM66O15016 1216 aa11.41□□□□□ -0.58
PTPN12-214ENST00000520947 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
PTPN12-214ENST00000520947 KCNC4Q03721 635 aa11.41□□□□□ -0.58
PTPN12-214ENST00000520947 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
PTPN12-214ENST00000520947 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
PTPN12-214ENST00000520947 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
PTPN12-214ENST00000520947 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
PTPN12-214ENST00000520947 IL21Q9HBE4 155 aa11.39□□□□□ -0.59
PTPN12-214ENST00000520947 AMHR2Q16671 573 aa11.38□□□□□ -0.59
PTPN12-214ENST00000520947 BLOC1S3Q6QNY0 202 aa11.38□□□□□ -0.59
PTPN12-214ENST00000520947 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
PTPN12-214ENST00000520947 A0A0G2JS52 829 aa11.37□□□□□ -0.59
PTPN12-214ENST00000520947 CD46P15529 392 aa11.37□□□□□ -0.59
PTPN12-214ENST00000520947 GCGRP47871 477 aa11.37□□□□□ -0.59
PTPN12-214ENST00000520947 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
PTPN12-214ENST00000520947 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
PTPN12-214ENST00000520947 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
PTPN12-214ENST00000520947 FUT2Q10981 343 aa11.34□□□□□ -0.59
PTPN12-214ENST00000520947 SSTR3P32745 418 aaPredicted RBP11.33□□□□□ -0.6
PTPN12-214ENST00000520947 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
PTPN12-214ENST00000520947 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
PTPN12-214ENST00000520947 PDE4DQ08499 809 aa11.32□□□□□ -0.6
PTPN12-214ENST00000520947 ZPR1O75312 459 aa11.31□□□□□ -0.6
PTPN12-214ENST00000520947 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
PTPN12-214ENST00000520947 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
PTPN12-214ENST00000520947 RGS20O76081 388 aa11.3□□□□□ -0.6
PTPN12-214ENST00000520947 TLL1O43897 1013 aa11.29□□□□□ -0.6
PTPN12-214ENST00000520947 KDM4AO75164 1064 aa11.29□□□□□ -0.6
PTPN12-214ENST00000520947 ATP6V1AP38606 617 aa11.29□□□□□ -0.6
PTPN12-214ENST00000520947 NR1I2O75469 434 aa11.28□□□□□ -0.6
PTPN12-214ENST00000520947 MORN1Q5T089 497 aa11.27□□□□□ -0.61
PTPN12-214ENST00000520947 SCUBE3Q8IX30 993 aa11.27□□□□□ -0.61
PTPN12-214ENST00000520947 MS4A1P11836 297 aa11.26□□□□□ -0.61
PTPN12-214ENST00000520947 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
PTPN12-214ENST00000520947 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
PTPN12-214ENST00000520947 HLA-CQ95604 372 aa11.25□□□□□ -0.61
PTPN12-214ENST00000520947 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
PTPN12-214ENST00000520947 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
PTPN12-214ENST00000520947 HOXA2O43364 376 aa11.22□□□□□ -0.61
PTPN12-214ENST00000520947 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
PTPN12-214ENST00000520947 USP46P62068 366 aa11.21□□□□□ -0.61
PTPN12-214ENST00000520947 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
PTPN12-214ENST00000520947 GPBP1L1Q9HC44 474 aaPredicted RBP11.21□□□□□ -0.61
PTPN12-214ENST00000520947 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
PTPN12-214ENST00000520947 SPSB2Q99619 263 aa11.2□□□□□ -0.62
PTPN12-214ENST00000520947 IRX2Q9BZI1 471 aaPredicted RBP11.2□□□□□ -0.62
PTPN12-214ENST00000520947 ADH1BP00325 375 aa11.19□□□□□ -0.62
PTPN12-214ENST00000520947 RNF19BQ6ZMZ0 732 aa11.18□□□□□ -0.62
PTPN12-214ENST00000520947 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.18□□□□□ -0.62
PTPN12-214ENST00000520947 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
PTPN12-214ENST00000520947 S1PR4O95977 384 aa11.17□□□□□ -0.62
PTPN12-214ENST00000520947 PRKCSHP14314 528 aaPredicted RBP11.17□□□□□ -0.62
PTPN12-214ENST00000520947 NDUFV2P19404 249 aa11.17□□□□□ -0.62
PTPN12-214ENST00000520947 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
PTPN12-214ENST00000520947 TBC1D2Q9BYX2 928 aa11.17□□□□□ -0.62
PTPN12-214ENST00000520947 GGCXP38435 758 aa11.16□□□□□ -0.62
PTPN12-214ENST00000520947 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
PTPN12-214ENST00000520947 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
PTPN12-214ENST00000520947 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
PTPN12-214ENST00000520947 SLC6A16Q9GZN6 736 aa11.15□□□□□ -0.62
PTPN12-214ENST00000520947 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
PTPN12-214ENST00000520947 FDX1P10109 184 aa11.14□□□□□ -0.63
PTPN12-214ENST00000520947 Q3C1V9 767 aa11.14□□□□□ -0.63
PTPN12-214ENST00000520947 SYMPKQ92797 1274 aaKnown RBP11.13□□□□□ -0.63
PTPN12-214ENST00000520947 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
PTPN12-214ENST00000520947 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-214ENST00000520947 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
PTPN12-214ENST00000520947 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
PTPN12-214ENST00000520947 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms