RNA–Protein interactions for RNA: ENST00000520096.5

LINC00535-203, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-203ENST00000520096 KCNC4Q03721 635 aa11.71□□□□□ -0.53
LINC00535-203ENST00000520096 AMHR2Q16671 573 aa11.69□□□□□ -0.54
LINC00535-203ENST00000520096 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
LINC00535-203ENST00000520096 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
LINC00535-203ENST00000520096 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
LINC00535-203ENST00000520096 PARP9Q8IXQ6 854 aa11.66□□□□□ -0.54
LINC00535-203ENST00000520096 TATDN2Q93075 761 aa11.66□□□□□ -0.54
LINC00535-203ENST00000520096 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
LINC00535-203ENST00000520096 PPP4CP60510 307 aa11.65□□□□□ -0.54
LINC00535-203ENST00000520096 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
LINC00535-203ENST00000520096 NBPF26B4DH59 902 aa11.63□□□□□ -0.55
LINC00535-203ENST00000520096 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
LINC00535-203ENST00000520096 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
LINC00535-203ENST00000520096 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
LINC00535-203ENST00000520096 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
LINC00535-203ENST00000520096 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
LINC00535-203ENST00000520096 TJAP1Q5JTD0 557 aa11.6□□□□□ -0.55
LINC00535-203ENST00000520096 NUDT18Q6ZVK8 323 aa11.6□□□□□ -0.55
LINC00535-203ENST00000520096 PHOX2BQ99453 314 aa11.59□□□□□ -0.55
LINC00535-203ENST00000520096 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
LINC00535-203ENST00000520096 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
LINC00535-203ENST00000520096 DAXXQ9UER7 740 aaPredicted RBP11.58□□□□□ -0.56
LINC00535-203ENST00000520096 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
LINC00535-203ENST00000520096 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
LINC00535-203ENST00000520096 MTRQ99707 1265 aa11.56□□□□□ -0.56
LINC00535-203ENST00000520096 MS4A1P11836 297 aa11.54□□□□□ -0.56
LINC00535-203ENST00000520096 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
LINC00535-203ENST00000520096 METTL3Q86U44 580 aaKnown RBP11.54□□□□□ -0.56
LINC00535-203ENST00000520096 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
LINC00535-203ENST00000520096 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
LINC00535-203ENST00000520096 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
LINC00535-203ENST00000520096 RNF40O75150 1001 aa11.53□□□□□ -0.56
LINC00535-203ENST00000520096 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
LINC00535-203ENST00000520096 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
LINC00535-203ENST00000520096 APLP1P51693 650 aa11.52□□□□□ -0.57
LINC00535-203ENST00000520096 OATP04181 439 aa11.51□□□□□ -0.57
LINC00535-203ENST00000520096 CLCN1P35523 988 aa11.51□□□□□ -0.57
LINC00535-203ENST00000520096 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
LINC00535-203ENST00000520096 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
LINC00535-203ENST00000520096 SWT1Q5T5J6 900 aaKnown RBP11.5□□□□□ -0.57
LINC00535-203ENST00000520096 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
LINC00535-203ENST00000520096 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
LINC00535-203ENST00000520096 Q6ZNB5 142 aa11.49□□□□□ -0.57
LINC00535-203ENST00000520096 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
LINC00535-203ENST00000520096 PPP1R18Q6NYC8 613 aa11.48□□□□□ -0.57
LINC00535-203ENST00000520096 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
LINC00535-203ENST00000520096 EYA1Q99502 592 aa11.47□□□□□ -0.57
LINC00535-203ENST00000520096 SSTR3P32745 418 aaPredicted RBP11.45□□□□□ -0.58
LINC00535-203ENST00000520096 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
LINC00535-203ENST00000520096 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
LINC00535-203ENST00000520096 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
LINC00535-203ENST00000520096 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
LINC00535-203ENST00000520096 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
LINC00535-203ENST00000520096 LCE2BO14633 110 aa11.42□□□□□ -0.58
LINC00535-203ENST00000520096 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
LINC00535-203ENST00000520096 COPS2P61201 443 aa11.41□□□□□ -0.58
LINC00535-203ENST00000520096 LAPTM4AQ15012 233 aa11.41□□□□□ -0.58
LINC00535-203ENST00000520096 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
LINC00535-203ENST00000520096 GFRA3O60609 400 aa11.4□□□□□ -0.58
LINC00535-203ENST00000520096 BEGAINQ9BUH8 593 aa11.4□□□□□ -0.58
LINC00535-203ENST00000520096 RCCD1A6NED2 376 aa11.39□□□□□ -0.59
LINC00535-203ENST00000520096 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
LINC00535-203ENST00000520096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.38□□□□□ -0.59
LINC00535-203ENST00000520096 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
LINC00535-203ENST00000520096 ZPR1O75312 459 aa11.35□□□□□ -0.59
LINC00535-203ENST00000520096 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
LINC00535-203ENST00000520096 DNAJB2P25686 324 aa11.34□□□□□ -0.59
LINC00535-203ENST00000520096 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
LINC00535-203ENST00000520096 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
LINC00535-203ENST00000520096 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
LINC00535-203ENST00000520096 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
LINC00535-203ENST00000520096 PRR14Q9BWN1 585 aa11.32□□□□□ -0.6
LINC00535-203ENST00000520096 PCDHB3Q9Y5E6 796 aa11.32□□□□□ -0.6
LINC00535-203ENST00000520096 GGCXP38435 758 aa11.31□□□□□ -0.6
LINC00535-203ENST00000520096 TRAF7Q6Q0C0 670 aa11.31□□□□□ -0.6
LINC00535-203ENST00000520096 BLOC1S3Q6QNY0 202 aa11.31□□□□□ -0.6
LINC00535-203ENST00000520096 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
LINC00535-203ENST00000520096 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
LINC00535-203ENST00000520096 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
LINC00535-203ENST00000520096 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
LINC00535-203ENST00000520096 CD46P15529 392 aa11.28□□□□□ -0.6
LINC00535-203ENST00000520096 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
LINC00535-203ENST00000520096 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
LINC00535-203ENST00000520096 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
LINC00535-203ENST00000520096 TLL1O43897 1013 aa11.27□□□□□ -0.61
LINC00535-203ENST00000520096 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
LINC00535-203ENST00000520096 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
LINC00535-203ENST00000520096 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
LINC00535-203ENST00000520096 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
LINC00535-203ENST00000520096 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
LINC00535-203ENST00000520096 CFHP08603 1231 aa11.24□□□□□ -0.61
LINC00535-203ENST00000520096 SLC10A3P09131 477 aa11.24□□□□□ -0.61
LINC00535-203ENST00000520096 SPIRE2Q8WWL2 714 aa11.24□□□□□ -0.61
LINC00535-203ENST00000520096 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
LINC00535-203ENST00000520096 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
LINC00535-203ENST00000520096 KMT5BQ4FZB7 885 aa11.23□□□□□ -0.61
LINC00535-203ENST00000520096 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
LINC00535-203ENST00000520096 TRIM67Q6ZTA4 783 aa11.21□□□□□ -0.61
LINC00535-203ENST00000520096 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC00535-203ENST00000520096 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms