RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-203ENST00000517667 SLAIN2Q9P270 581 aa18.01■□□□□ 0.47
TRAPPC9-203ENST00000517667 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-203ENST00000517667 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
TRAPPC9-203ENST00000517667 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
TRAPPC9-203ENST00000517667 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
TRAPPC9-203ENST00000517667 BCANQ96GW7 911 aa17.99■□□□□ 0.47
TRAPPC9-203ENST00000517667 MYO5BQ9ULV0 1848 aa17.99■□□□□ 0.47
TRAPPC9-203ENST00000517667 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
TRAPPC9-203ENST00000517667 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
TRAPPC9-203ENST00000517667 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
TRAPPC9-203ENST00000517667 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-203ENST00000517667 APLP2Q06481 763 aa17.96■□□□□ 0.47
TRAPPC9-203ENST00000517667 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
TRAPPC9-203ENST00000517667 TMEM131LA2VDJ0 1609 aa17.95■□□□□ 0.46
TRAPPC9-203ENST00000517667 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
TRAPPC9-203ENST00000517667 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
TRAPPC9-203ENST00000517667 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-203ENST00000517667 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
TRAPPC9-203ENST00000517667 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
TRAPPC9-203ENST00000517667 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-203ENST00000517667 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
TRAPPC9-203ENST00000517667 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC9-203ENST00000517667 LRP6O75581 1613 aa17.91■□□□□ 0.46
TRAPPC9-203ENST00000517667 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-203ENST00000517667 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
TRAPPC9-203ENST00000517667 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
TRAPPC9-203ENST00000517667 MEX3CQ5U5Q3 659 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-203ENST00000517667 C14orf37Q86TY3 774 aa17.89■□□□□ 0.45
TRAPPC9-203ENST00000517667 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRAPPC9-203ENST00000517667 PIK3R4Q99570 1358 aa17.89■□□□□ 0.45
TRAPPC9-203ENST00000517667 ANKRD50Q9ULJ7 1429 aa17.89■□□□□ 0.45
TRAPPC9-203ENST00000517667 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
TRAPPC9-203ENST00000517667 UNC13BO14795 1591 aa17.87■□□□□ 0.45
TRAPPC9-203ENST00000517667 C19orf44Q9H6X5 657 aa17.86■□□□□ 0.45
TRAPPC9-203ENST00000517667 TRPM2O94759 1503 aa17.86■□□□□ 0.45
TRAPPC9-203ENST00000517667 ATF3P18847 181 aa17.85■□□□□ 0.45
TRAPPC9-203ENST00000517667 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
TRAPPC9-203ENST00000517667 E9PCH4 1651 aa17.84■□□□□ 0.45
TRAPPC9-203ENST00000517667 CDK12Q9NYV4 1490 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC9-203ENST00000517667 UPF1Q92900 1129 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAPPC9-203ENST00000517667 DCCP43146 1447 aa17.82■□□□□ 0.44
TRAPPC9-203ENST00000517667 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
TRAPPC9-203ENST00000517667 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
TRAPPC9-203ENST00000517667 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
TRAPPC9-203ENST00000517667 RXRBP28702 533 aa17.8■□□□□ 0.44
TRAPPC9-203ENST00000517667 NHSL1Q5SYE7 1610 aa17.8■□□□□ 0.44
TRAPPC9-203ENST00000517667 XRN1Q8IZH2 1706 aaKnown RBP17.78■□□□□ 0.44
TRAPPC9-203ENST00000517667 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
TRAPPC9-203ENST00000517667 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
TRAPPC9-203ENST00000517667 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
TRAPPC9-203ENST00000517667 SETD5Q9C0A6 1442 aa17.76■□□□□ 0.43
TRAPPC9-203ENST00000517667 AMOTL2Q9Y2J4 779 aa17.76■□□□□ 0.43
TRAPPC9-203ENST00000517667 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC9-203ENST00000517667 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
TRAPPC9-203ENST00000517667 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
TRAPPC9-203ENST00000517667 NRXN3Q9Y4C0 1643 aa17.74■□□□□ 0.43
TRAPPC9-203ENST00000517667 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC9-203ENST00000517667 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC9-203ENST00000517667 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC9-203ENST00000517667 AFF2P51816 1311 aa17.72■□□□□ 0.43
TRAPPC9-203ENST00000517667 MST1RQ04912 1400 aa17.72■□□□□ 0.43
TRAPPC9-203ENST00000517667 ROCK1Q13464 1354 aa17.72■□□□□ 0.43
TRAPPC9-203ENST00000517667 LRRC59Q96AG4 307 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-203ENST00000517667 SPHKAPQ2M3C7 1700 aa17.71■□□□□ 0.43
TRAPPC9-203ENST00000517667 RGS12O14924 1447 aa17.68■□□□□ 0.42
TRAPPC9-203ENST00000517667 NALCNQ8IZF0 1738 aa17.68■□□□□ 0.42
TRAPPC9-203ENST00000517667 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
TRAPPC9-203ENST00000517667 NUP155O75694 1391 aa17.67■□□□□ 0.42
TRAPPC9-203ENST00000517667 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-203ENST00000517667 C8orf37Q96NL8 207 aa17.66■□□□□ 0.42
TRAPPC9-203ENST00000517667 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
TRAPPC9-203ENST00000517667 LAMC1P11047 1609 aa17.65■□□□□ 0.42
TRAPPC9-203ENST00000517667 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
TRAPPC9-203ENST00000517667 METP08581 1390 aa17.63■□□□□ 0.41
TRAPPC9-203ENST00000517667 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
TRAPPC9-203ENST00000517667 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-203ENST00000517667 ATAD2Q6PL18 1390 aa17.61■□□□□ 0.41
TRAPPC9-203ENST00000517667 NEXMIFQ5QGS0 1516 aa17.61■□□□□ 0.41
TRAPPC9-203ENST00000517667 KIF1BO60333 1816 aa17.6■□□□□ 0.41
TRAPPC9-203ENST00000517667 SRCAPQ6ZRS2 3230 aa17.6■□□□□ 0.41
TRAPPC9-203ENST00000517667 FOXD1Q16676 465 aa17.59■□□□□ 0.41
TRAPPC9-203ENST00000517667 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.41
TRAPPC9-203ENST00000517667 PTCH1Q13635 1447 aa17.58■□□□□ 0.41
TRAPPC9-203ENST00000517667 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
TRAPPC9-203ENST00000517667 CLTCL1P53675 1640 aa17.58■□□□□ 0.4
TRAPPC9-203ENST00000517667 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC9-203ENST00000517667 ADAMTS2O95450 1211 aa17.56■□□□□ 0.4
TRAPPC9-203ENST00000517667 SOS2Q07890 1332 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-203ENST00000517667 USP21Q9UK80 565 aa17.54■□□□□ 0.4
TRAPPC9-203ENST00000517667 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-203ENST00000517667 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
TRAPPC9-203ENST00000517667 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.4
TRAPPC9-203ENST00000517667 EP400Q96L91 3159 aa17.51■□□□□ 0.39
TRAPPC9-203ENST00000517667 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC9-203ENST00000517667 ATRNO75882 1429 aa17.5■□□□□ 0.39
TRAPPC9-203ENST00000517667 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
TRAPPC9-203ENST00000517667 ITGAEP38570 1179 aa17.49■□□□□ 0.39
TRAPPC9-203ENST00000517667 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
TRAPPC9-203ENST00000517667 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms