RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 CCDC102AQ96A19 550 aa12.87□□□□□ -0.35
SCARNA1-201ENST00000517138 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
SCARNA1-201ENST00000517138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
SCARNA1-201ENST00000517138 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
SCARNA1-201ENST00000517138 KRI1Q8N9T8 703 aaKnown RBP12.82□□□□□ -0.36
SCARNA1-201ENST00000517138 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
SCARNA1-201ENST00000517138 PPP4CP60510 307 aa12.81□□□□□ -0.36
SCARNA1-201ENST00000517138 SLC10A3P09131 477 aa12.78□□□□□ -0.36
SCARNA1-201ENST00000517138 SLF2Q8IX21 1173 aa12.78□□□□□ -0.36
SCARNA1-201ENST00000517138 APLP1P51693 650 aa12.76□□□□□ -0.37
SCARNA1-201ENST00000517138 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
SCARNA1-201ENST00000517138 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
SCARNA1-201ENST00000517138 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
SCARNA1-201ENST00000517138 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
SCARNA1-201ENST00000517138 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
SCARNA1-201ENST00000517138 TRIM66O15016 1216 aa12.69□□□□□ -0.38
SCARNA1-201ENST00000517138 CFHP08603 1231 aa12.69□□□□□ -0.38
SCARNA1-201ENST00000517138 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
SCARNA1-201ENST00000517138 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
SCARNA1-201ENST00000517138 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
SCARNA1-201ENST00000517138 RDH13Q8NBN7 331 aa12.67□□□□□ -0.38
SCARNA1-201ENST00000517138 AK7Q96M32 723 aa12.67□□□□□ -0.38
SCARNA1-201ENST00000517138 SLC4A3P48751 1232 aa12.66□□□□□ -0.38
SCARNA1-201ENST00000517138 AMHR2Q16671 573 aa12.64□□□□□ -0.39
SCARNA1-201ENST00000517138 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
SCARNA1-201ENST00000517138 MTRQ99707 1265 aa12.64□□□□□ -0.39
SCARNA1-201ENST00000517138 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
SCARNA1-201ENST00000517138 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
SCARNA1-201ENST00000517138 CD46P15529 392 aa12.62□□□□□ -0.39
SCARNA1-201ENST00000517138 CLCN1P35523 988 aa12.62□□□□□ -0.39
SCARNA1-201ENST00000517138 COPS2P61201 443 aa12.62□□□□□ -0.39
SCARNA1-201ENST00000517138 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
SCARNA1-201ENST00000517138 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
SCARNA1-201ENST00000517138 ACTN4O43707 911 aaKnown RBP12.61□□□□□ -0.39
SCARNA1-201ENST00000517138 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
SCARNA1-201ENST00000517138 TPRNQ4KMQ1 711 aa12.61□□□□□ -0.39
SCARNA1-201ENST00000517138 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
SCARNA1-201ENST00000517138 NECTIN2Q92692 538 aa12.61□□□□□ -0.39
SCARNA1-201ENST00000517138 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
SCARNA1-201ENST00000517138 SULF1Q8IWU6 871 aa12.6□□□□□ -0.39
SCARNA1-201ENST00000517138 GCGRP47871 477 aa12.59□□□□□ -0.39
SCARNA1-201ENST00000517138 PDE4DQ08499 809 aa12.59□□□□□ -0.39
SCARNA1-201ENST00000517138 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
SCARNA1-201ENST00000517138 KMT5BQ4FZB7 885 aa12.59□□□□□ -0.39
SCARNA1-201ENST00000517138 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
SCARNA1-201ENST00000517138 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
SCARNA1-201ENST00000517138 FUT2Q10981 343 aa12.57□□□□□ -0.4
SCARNA1-201ENST00000517138 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
SCARNA1-201ENST00000517138 KCNC4Q03721 635 aa12.56□□□□□ -0.4
SCARNA1-201ENST00000517138 RSPH4AQ5TD94 716 aa12.56□□□□□ -0.4
SCARNA1-201ENST00000517138 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
SCARNA1-201ENST00000517138 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
SCARNA1-201ENST00000517138 IL21Q9HBE4 155 aa12.55□□□□□ -0.4
SCARNA1-201ENST00000517138 MS4A1P11836 297 aa12.54□□□□□ -0.4
SCARNA1-201ENST00000517138 PRKCSHP14314 528 aaPredicted RBP12.53□□□□□ -0.4
SCARNA1-201ENST00000517138 HLA-CQ95604 372 aa12.53□□□□□ -0.4
SCARNA1-201ENST00000517138 TLL1O43897 1013 aa12.52□□□□□ -0.41
SCARNA1-201ENST00000517138 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
SCARNA1-201ENST00000517138 ZPR1O75312 459 aa12.5□□□□□ -0.41
SCARNA1-201ENST00000517138 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
SCARNA1-201ENST00000517138 MORN1Q5T089 497 aa12.49□□□□□ -0.41
SCARNA1-201ENST00000517138 KDM4AO75164 1064 aa12.48□□□□□ -0.41
SCARNA1-201ENST00000517138 ATP6V1AP38606 617 aa12.48□□□□□ -0.41
SCARNA1-201ENST00000517138 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
SCARNA1-201ENST00000517138 GUCA2AQ02747 115 aa12.47□□□□□ -0.41
SCARNA1-201ENST00000517138 BEGAINQ9BUH8 593 aa12.47□□□□□ -0.41
SCARNA1-201ENST00000517138 SLC27A5Q9Y2P5 690 aa12.47□□□□□ -0.41
SCARNA1-201ENST00000517138 A0A0G2JS52 829 aa12.46□□□□□ -0.41
SCARNA1-201ENST00000517138 SPIRE2Q8WWL2 714 aa12.44□□□□□ -0.42
SCARNA1-201ENST00000517138 HOXA2O43364 376 aa12.43□□□□□ -0.42
SCARNA1-201ENST00000517138 NR1I2O75469 434 aa12.43□□□□□ -0.42
SCARNA1-201ENST00000517138 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
SCARNA1-201ENST00000517138 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
SCARNA1-201ENST00000517138 THAP11Q96EK4 314 aa12.41□□□□□ -0.42
SCARNA1-201ENST00000517138 NDUFV2P19404 249 aa12.4□□□□□ -0.42
SCARNA1-201ENST00000517138 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
SCARNA1-201ENST00000517138 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.42
SCARNA1-201ENST00000517138 MOXD2PA6NHM9 499 aa12.39□□□□□ -0.43
SCARNA1-201ENST00000517138 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
SCARNA1-201ENST00000517138 ADH1BP00325 375 aa12.37□□□□□ -0.43
SCARNA1-201ENST00000517138 USP46P62068 366 aa12.37□□□□□ -0.43
SCARNA1-201ENST00000517138 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
SCARNA1-201ENST00000517138 PCDHGC3Q9UN70 934 aa12.37□□□□□ -0.43
SCARNA1-201ENST00000517138 S1PR4O95977 384 aa12.36□□□□□ -0.43
SCARNA1-201ENST00000517138 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
SCARNA1-201ENST00000517138 BRICD5Q6PL45 260 aa12.36□□□□□ -0.43
SCARNA1-201ENST00000517138 SPSB2Q99619 263 aa12.36□□□□□ -0.43
SCARNA1-201ENST00000517138 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
SCARNA1-201ENST00000517138 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
SCARNA1-201ENST00000517138 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
SCARNA1-201ENST00000517138 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
SCARNA1-201ENST00000517138 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
SCARNA1-201ENST00000517138 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
SCARNA1-201ENST00000517138 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
SCARNA1-201ENST00000517138 FDX1P10109 184 aa12.32□□□□□ -0.44
SCARNA1-201ENST00000517138 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
SCARNA1-201ENST00000517138 RNF223E7ERA6 249 aa12.31□□□□□ -0.44
SCARNA1-201ENST00000517138 SLC6A16Q9GZN6 736 aa12.31□□□□□ -0.44
SCARNA1-201ENST00000517138 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
SCARNA1-201ENST00000517138 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms