RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 RBM46Q8TBY0 533 aaKnown RBP4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 RBM33Q96EV2 1170 aaKnown RBP4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 TMEM121BQ9BXQ6 578 aaPredicted RBP4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 OCEL1Q9H607 264 aa4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 CDHR5Q9HBB8 845 aa4.23□□□□□ -1.73
SCARNA17.1-201ENST00000516211 NUTM2BA6NNL0 878 aaPredicted RBP4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 NUTM2EB1AL46 878 aaPredicted RBP4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 IGSF3O75054 1194 aa4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 AP1G2O75843 785 aa4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 HSP90B1P14625 803 aaKnown RBP4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 PLCG2P16885 1265 aa4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 RFX1P22670 979 aa4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 PRIM1P49642 420 aaKnown RBP4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 NUTM2DQ5VT03 806 aaPredicted RBP4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 NUTM2AQ8IVF1 878 aaPredicted RBP4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 USP35Q9P2H5 1018 aa4.22□□□□□ -1.73
SCARNA17.1-201ENST00000516211 POM121CA8CG34 1229 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CDK11BP21127 795 aaKnown RBP4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 GJA5P36382 358 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 IER5LQ5T953 404 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 HDGFL1Q5TGJ6 251 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ZNF710Q8N1W2 664 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PDCD7Q8N8D1 485 aaKnown RBP4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PXYLP1Q8TE99 480 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PHOX2BQ99453 314 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 NPDC1Q9NQX5 325 aaPredicted RBP4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 BMP2KQ9NSY1 1161 aaPredicted RBP4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 RBM27Q9P2N5 1060 aaKnown RBP4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 TBC1D2BQ9UPU7 963 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CDK11AQ9UQ88 783 aaPredicted RBP4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 TRPC6Q9Y210 931 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 IVNS1ABPQ9Y6Y0 642 aa4.21□□□□□ -1.74
SCARNA17.1-201ENST00000516211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 LOC105371045A0A1W2PR82 267 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 SPTLC1O15269 473 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 USP17L8P0C7I0 530 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 SOX11P35716 441 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CSPP1Q1MSJ5 1256 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 RSPH4AQ5TD94 716 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PNMA1Q8ND90 353 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PTCD2Q8WV60 388 aaKnown RBP4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 SPIRE2Q8WWL2 714 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ZNF428Q96B54 188 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 VRTNQ9H8Y1 702 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ANO8Q9HCE9 1232 aaPredicted RBP4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 LIMD1Q9UGP4 676 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ADGRG1Q9Y653 693 aa4.2□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ERCC3P19447 782 aa4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CLCN6P51797 869 aa4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 RSBN1LQ6PCB5 846 aaPredicted RBP4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PADI6Q6TGC4 694 aa4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PIP4P2Q8N4L2 257 aa4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CCER1Q8TC90 406 aaPredicted RBP4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PPP1R12CQ9BZL4 782 aa4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 BCL11AQ9H165 835 aa4.19□□□□□ -1.74
SCARNA17.1-201ENST00000516211 LMOD1P29536 600 aaPredicted RBP4.18□□□□□ -1.74
SCARNA17.1-201ENST00000516211 TSR1Q2NL82 804 aaKnown RBP4.18□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PRPF38BQ5VTL8 546 aaKnown RBP4.18□□□□□ -1.74
SCARNA17.1-201ENST00000516211 SPATA31D1Q6ZQQ2 1576 aa4.18□□□□□ -1.74
SCARNA17.1-201ENST00000516211 LILRB3O75022 631 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ATG7O95352 703 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 SLC34A2O95436 690 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 IRX5P78411 483 aaPredicted RBP4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 SEMA3FQ13275 785 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 FAM161AQ3B820 660 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CFAP70Q5T0N1 1121 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CHRDL2Q6WN34 429 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 HELBQ8NG08 1087 aaPredicted RBP4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 NLRP7Q8WX94 980 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 JPH4Q96JJ6 628 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ZBTB3Q9H5J0 574 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PCDHGA10Q9Y5H3 936 aa4.17□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PALM3A6NDB9 673 aaPredicted RBP4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 CD46P15529 392 aa4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 USP46P62068 366 aa4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 C3orf67Q6ZVT6 689 aa4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 PUS7Q96PZ0 661 aaKnown RBP4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 GNEQ9Y223 722 aaKnown RBP4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ADGRL1O94910 1474 aa4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 ZNF608Q9ULD9 1512 aaPredicted RBP4.16□□□□□ -1.74
SCARNA17.1-201ENST00000516211 MOXD2PA6NHM9 499 aa4.15□□□□□ -1.75
SCARNA17.1-201ENST00000516211 DDX11L8A8MPP1 907 aa4.15□□□□□ -1.75
SCARNA17.1-201ENST00000516211 SEC24BO95487 1268 aa4.15□□□□□ -1.75
SCARNA17.1-201ENST00000516211 PRSS12P56730 875 aa4.15□□□□□ -1.75
SCARNA17.1-201ENST00000516211 C6orf132Q5T0Z8 1188 aa4.15□□□□□ -1.75
SCARNA17.1-201ENST00000516211 RBM47A0AV96 593 aaKnown RBP4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 DNAJB2P25686 324 aa4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 EIF4G2P78344 907 aaKnown RBP eCLIP4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 VAC14Q08AM6 782 aa4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 QPCTQ16769 361 aa4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 RDH13Q8NBN7 331 aa4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 ZDHHC16Q969W1 377 aa4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 TFIP11Q9UBB9 837 aaKnown RBP4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 WDR62O43379 1518 aa4.14□□□□□ -1.75
SCARNA17.1-201ENST00000516211 NCAPD3P42695 1498 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 MRC2Q9UBG0 1479 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 RCCD1A6NED2 376 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 NBPF26B4DH59 902 aa4.13□□□□□ -1.75
SCARNA17.1-201ENST00000516211 KDM4AO75164 1064 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms