RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 HFM1A2PYH4 1435 aa26.85■■□□□ 1.89
SFXN1-212ENST00000515791 PIP4K2BP78356 416 aa26.85■■□□□ 1.89
SFXN1-212ENST00000515791 NWD1Q149M9 1564 aa26.84■■□□□ 1.89
SFXN1-212ENST00000515791 KCNA6P17658 529 aa26.84■■□□□ 1.89
SFXN1-212ENST00000515791 SPHKAPQ2M3C7 1700 aa26.84■■□□□ 1.89
SFXN1-212ENST00000515791 HSPA1LP34931 641 aa26.81■■□□□ 1.88
SFXN1-212ENST00000515791 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
SFXN1-212ENST00000515791 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
SFXN1-212ENST00000515791 SCAF1Q9H7N4 1312 aaKnown RBP26.78■■□□□ 1.88
SFXN1-212ENST00000515791 ADAMTS13Q76LX8 1427 aa26.78■■□□□ 1.88
SFXN1-212ENST00000515791 CHD2O14647 1828 aaKnown RBP26.78■■□□□ 1.88
SFXN1-212ENST00000515791 TMEM94Q12767 1356 aa26.77■■□□□ 1.88
SFXN1-212ENST00000515791 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.77■■□□□ 1.88
SFXN1-212ENST00000515791 NKTRP30414 1462 aaKnown RBP26.76■■□□□ 1.87
SFXN1-212ENST00000515791 DISP3Q9P2K9 1392 aa26.76■■□□□ 1.87
SFXN1-212ENST00000515791 TBX22Q9Y458 520 aa26.75■■□□□ 1.87
SFXN1-212ENST00000515791 NUTM2DQ5VT03 806 aaPredicted RBP26.74■■□□□ 1.87
SFXN1-212ENST00000515791 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
SFXN1-212ENST00000515791 CLTCL1P53675 1640 aa26.74■■□□□ 1.87
SFXN1-212ENST00000515791 TRPM2O94759 1503 aa26.74■■□□□ 1.87
SFXN1-212ENST00000515791 PPP1R15AO75807 674 aaPredicted RBP26.73■■□□□ 1.87
SFXN1-212ENST00000515791 BCANQ96GW7 911 aa26.72■■□□□ 1.87
SFXN1-212ENST00000515791 PROSER2Q86WR7 435 aaPredicted RBP26.7■■□□□ 1.86
SFXN1-212ENST00000515791 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
SFXN1-212ENST00000515791 DIP2AQ14689 1571 aa26.7■■□□□ 1.86
SFXN1-212ENST00000515791 NRXN3Q9Y4C0 1643 aa26.68■■□□□ 1.86
SFXN1-212ENST00000515791 ILDR2Q71H61 639 aa26.68■■□□□ 1.86
SFXN1-212ENST00000515791 PIK3R4Q99570 1358 aa26.66■■□□□ 1.86
SFXN1-212ENST00000515791 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
SFXN1-212ENST00000515791 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
SFXN1-212ENST00000515791 NEXMIFQ5QGS0 1516 aa26.65■■□□□ 1.86
SFXN1-212ENST00000515791 FAM135BQ49AJ0 1406 aa26.64■■□□□ 1.85
SFXN1-212ENST00000515791 PTPRUQ92729 1446 aa26.64■■□□□ 1.85
SFXN1-212ENST00000515791 KIF1BO60333 1816 aa26.61■■□□□ 1.85
SFXN1-212ENST00000515791 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
SFXN1-212ENST00000515791 MED1Q15648 1581 aaPredicted RBP26.6■■□□□ 1.85
SFXN1-212ENST00000515791 NCOA3Q9Y6Q9 1424 aa26.6■■□□□ 1.85
SFXN1-212ENST00000515791 ZNF326Q5BKZ1 582 aaKnown RBP26.58■■□□□ 1.85
SFXN1-212ENST00000515791 ROBO1Q9Y6N7 1651 aa26.57■■□□□ 1.84
SFXN1-212ENST00000515791 MSH6P52701 1360 aa26.56■■□□□ 1.84
SFXN1-212ENST00000515791 XRN1Q8IZH2 1706 aaKnown RBP26.55■■□□□ 1.84
SFXN1-212ENST00000515791 AMOTL2Q9Y2J4 779 aa26.54■■□□□ 1.84
SFXN1-212ENST00000515791 FOXD1Q16676 465 aa26.53■■□□□ 1.84
SFXN1-212ENST00000515791 METP08581 1390 aa26.53■■□□□ 1.84
SFXN1-212ENST00000515791 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
SFXN1-212ENST00000515791 SLAIN2Q9P270 581 aa26.5■■□□□ 1.83
SFXN1-212ENST00000515791 MPHOSPH9Q99550 1183 aa26.49■■□□□ 1.83
SFXN1-212ENST00000515791 SETD1AO15047 1707 aaKnown RBP26.48■■□□□ 1.83
SFXN1-212ENST00000515791 PPLO60437 1756 aa26.47■■□□□ 1.83
SFXN1-212ENST00000515791 RPGRIP1LQ68CZ1 1315 aa26.46■■□□□ 1.83
SFXN1-212ENST00000515791 C19orf44Q9H6X5 657 aa26.46■■□□□ 1.83
SFXN1-212ENST00000515791 SETD5Q9C0A6 1442 aa26.46■■□□□ 1.83
SFXN1-212ENST00000515791 SPATA31E1Q6ZUB1 1445 aa26.43■■□□□ 1.82
SFXN1-212ENST00000515791 VGFO15240 615 aaPredicted RBP26.43■■□□□ 1.82
SFXN1-212ENST00000515791 SOCS7O14512 581 aa26.4■■□□□ 1.82
SFXN1-212ENST00000515791 CADPS2Q86UW7 1296 aa26.4■■□□□ 1.82
SFXN1-212ENST00000515791 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.82
SFXN1-212ENST00000515791 DCCP43146 1447 aa26.39■■□□□ 1.81
SFXN1-212ENST00000515791 C14orf37Q86TY3 774 aa26.38■■□□□ 1.81
SFXN1-212ENST00000515791 PRAG1Q86YV5 1406 aa26.38■■□□□ 1.81
SFXN1-212ENST00000515791 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
SFXN1-212ENST00000515791 PHLPP1O60346 1717 aa26.37■■□□□ 1.81
SFXN1-212ENST00000515791 IFT172Q9UG01 1749 aa26.37■■□□□ 1.81
SFXN1-212ENST00000515791 RAB3GAP2Q9H2M9 1393 aa26.37■■□□□ 1.81
SFXN1-212ENST00000515791 COL16A1Q07092 1604 aaPredicted RBP26.36■■□□□ 1.81
SFXN1-212ENST00000515791 ATF3P18847 181 aa26.35■■□□□ 1.81
SFXN1-212ENST00000515791 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
SFXN1-212ENST00000515791 PTCH1Q13635 1447 aa26.33■■□□□ 1.81
SFXN1-212ENST00000515791 AHDC1Q5TGY3 1603 aaPredicted RBP26.33■■□□□ 1.81
SFXN1-212ENST00000515791 ADGRF5Q8IZF2 1346 aa26.33■■□□□ 1.81
SFXN1-212ENST00000515791 MST1RQ04912 1400 aa26.32■■□□□ 1.8
SFXN1-212ENST00000515791 ADGRL3Q9HAR2 1447 aa26.32■■□□□ 1.8
SFXN1-212ENST00000515791 ROBO2Q9HCK4 1378 aa26.32■■□□□ 1.8
SFXN1-212ENST00000515791 RGS17Q9UGC6 210 aaPredicted RBP26.31■■□□□ 1.8
SFXN1-212ENST00000515791 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
SFXN1-212ENST00000515791 BRINP3Q76B58 766 aa26.3■■□□□ 1.8
SFXN1-212ENST00000515791 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
SFXN1-212ENST00000515791 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
SFXN1-212ENST00000515791 JCADQ9P266 1359 aa26.27■■□□□ 1.8
SFXN1-212ENST00000515791 ASXL1Q8IXJ9 1541 aa26.25■■□□□ 1.79
SFXN1-212ENST00000515791 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
SFXN1-212ENST00000515791 NHSL1Q5SYE7 1610 aa26.22■■□□□ 1.79
SFXN1-212ENST00000515791 HRCP23327 699 aa26.21■■□□□ 1.79
SFXN1-212ENST00000515791 NRXN1Q9ULB1 1477 aa26.21■■□□□ 1.79
SFXN1-212ENST00000515791 TECPR2O15040 1411 aa26.2■■□□□ 1.78
SFXN1-212ENST00000515791 SHPRHQ149N8 1683 aa26.19■■□□□ 1.78
SFXN1-212ENST00000515791 C1orf167Q5SNV9 1468 aa26.18■■□□□ 1.78
SFXN1-212ENST00000515791 LRP6O75581 1613 aa26.17■■□□□ 1.78
SFXN1-212ENST00000515791 MYOM2P54296 1465 aa26.17■■□□□ 1.78
SFXN1-212ENST00000515791 LRPPRCP42704 1394 aaKnown RBP26.16■■□□□ 1.78
SFXN1-212ENST00000515791 LAMC1P11047 1609 aa26.15■■□□□ 1.78
SFXN1-212ENST00000515791 KNDC1Q76NI1 1749 aa26.15■■□□□ 1.78
SFXN1-212ENST00000515791 ABCC11Q96J66 1382 aa26.15■■□□□ 1.78
SFXN1-212ENST00000515791 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.78
SFXN1-212ENST00000515791 SPATA31A6Q5VVP1 1343 aa26.14■■□□□ 1.77
SFXN1-212ENST00000515791 C14orf93Q9H972 538 aaKnown RBP26.13■■□□□ 1.77
SFXN1-212ENST00000515791 POTEAQ6S8J7 498 aa26.12■■□□□ 1.77
SFXN1-212ENST00000515791 DDX17Q92841 729 aaKnown RBP26.12■■□□□ 1.77
SFXN1-212ENST00000515791 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
SFXN1-212ENST00000515791 WAPLQ7Z5K2 1190 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms