RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
SMAD5-209ENST00000514777 MSH6P52701 1360 aa20.6■□□□□ 0.89
SMAD5-209ENST00000514777 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
SMAD5-209ENST00000514777 SLC52A1Q9NWF4 448 aa20.6■□□□□ 0.89
SMAD5-209ENST00000514777 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
SMAD5-209ENST00000514777 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
SMAD5-209ENST00000514777 JCADQ9P266 1359 aa20.59■□□□□ 0.89
SMAD5-209ENST00000514777 BCANQ96GW7 911 aa20.58■□□□□ 0.89
SMAD5-209ENST00000514777 COL16A1Q07092 1604 aaPredicted RBP20.57■□□□□ 0.88
SMAD5-209ENST00000514777 PLEKHG1Q9ULL1 1385 aa20.56■□□□□ 0.88
SMAD5-209ENST00000514777 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
SMAD5-209ENST00000514777 TMEM131LA2VDJ0 1609 aa20.53■□□□□ 0.88
SMAD5-209ENST00000514777 LRP6O75581 1613 aa20.53■□□□□ 0.88
SMAD5-209ENST00000514777 RIMS2Q9UQ26 1411 aa20.53■□□□□ 0.88
SMAD5-209ENST00000514777 TBX22Q9Y458 520 aa20.52■□□□□ 0.88
SMAD5-209ENST00000514777 ADGRL2O95490 1459 aa20.51■□□□□ 0.87
SMAD5-209ENST00000514777 RPRD2Q5VT52 1461 aaKnown RBP20.51■□□□□ 0.87
SMAD5-209ENST00000514777 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.5■□□□□ 0.87
SMAD5-209ENST00000514777 NCOA3Q9Y6Q9 1424 aa20.5■□□□□ 0.87
SMAD5-209ENST00000514777 UPF1Q92900 1129 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMAD5-209ENST00000514777 ADAMTS13Q76LX8 1427 aa20.48■□□□□ 0.87
SMAD5-209ENST00000514777 SPATA31A6Q5VVP1 1343 aa20.48■□□□□ 0.87
SMAD5-209ENST00000514777 PPP1R15AO75807 674 aaPredicted RBP20.47■□□□□ 0.87
SMAD5-209ENST00000514777 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
SMAD5-209ENST00000514777 APLP2Q06481 763 aa20.47■□□□□ 0.87
SMAD5-209ENST00000514777 AHDC1Q5TGY3 1603 aaPredicted RBP20.46■□□□□ 0.87
SMAD5-209ENST00000514777 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
SMAD5-209ENST00000514777 SHPRHQ149N8 1683 aa20.46■□□□□ 0.87
SMAD5-209ENST00000514777 NUTM2DQ5VT03 806 aaPredicted RBP20.45■□□□□ 0.86
SMAD5-209ENST00000514777 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
SMAD5-209ENST00000514777 ZNF772Q68DY9 489 aaPredicted RBP20.44■□□□□ 0.86
SMAD5-209ENST00000514777 CADPS2Q86UW7 1296 aa20.43■□□□□ 0.86
SMAD5-209ENST00000514777 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMAD5-209ENST00000514777 TRIM52Q96A61 297 aa20.43■□□□□ 0.86
SMAD5-209ENST00000514777 E9PCH4 1651 aa20.42■□□□□ 0.86
SMAD5-209ENST00000514777 MEX3CQ5U5Q3 659 aaKnown RBP20.42■□□□□ 0.86
SMAD5-209ENST00000514777 C14orf37Q86TY3 774 aa20.42■□□□□ 0.86
SMAD5-209ENST00000514777 DIP2AQ14689 1571 aa20.42■□□□□ 0.86
SMAD5-209ENST00000514777 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
SMAD5-209ENST00000514777 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
SMAD5-209ENST00000514777 ATF3P18847 181 aa20.4■□□□□ 0.86
SMAD5-209ENST00000514777 BRINP3Q76B58 766 aa20.4■□□□□ 0.86
SMAD5-209ENST00000514777 PIK3R4Q99570 1358 aa20.4■□□□□ 0.86
SMAD5-209ENST00000514777 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.85
SMAD5-209ENST00000514777 UNC13BO14795 1591 aa20.38■□□□□ 0.85
SMAD5-209ENST00000514777 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
SMAD5-209ENST00000514777 RXRBP28702 533 aa20.37■□□□□ 0.85
SMAD5-209ENST00000514777 NUTM2BA6NNL0 878 aaPredicted RBP20.35■□□□□ 0.85
SMAD5-209ENST00000514777 NUTM2EB1AL46 878 aaPredicted RBP20.35■□□□□ 0.85
SMAD5-209ENST00000514777 NUTM2AQ8IVF1 878 aaPredicted RBP20.35■□□□□ 0.85
SMAD5-209ENST00000514777 TRPM2O94759 1503 aa20.34■□□□□ 0.85
SMAD5-209ENST00000514777 CDK12Q9NYV4 1490 aaPredicted RBP20.32■□□□□ 0.84
SMAD5-209ENST00000514777 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
SMAD5-209ENST00000514777 IQGAP3Q86VI3 1631 aa20.31■□□□□ 0.84
SMAD5-209ENST00000514777 AFF2P51816 1311 aa20.31■□□□□ 0.84
SMAD5-209ENST00000514777 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
SMAD5-209ENST00000514777 ASXL1Q8IXJ9 1541 aa20.31■□□□□ 0.84
SMAD5-209ENST00000514777 NHSL1Q5SYE7 1610 aa20.31■□□□□ 0.84
SMAD5-209ENST00000514777 XRN1Q8IZH2 1706 aaKnown RBP20.3■□□□□ 0.84
SMAD5-209ENST00000514777 DCCP43146 1447 aa20.29■□□□□ 0.84
SMAD5-209ENST00000514777 MST1RQ04912 1400 aa20.29■□□□□ 0.84
SMAD5-209ENST00000514777 DDX17Q92841 729 aaKnown RBP20.27■□□□□ 0.84
SMAD5-209ENST00000514777 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
SMAD5-209ENST00000514777 METP08581 1390 aa20.25■□□□□ 0.83
SMAD5-209ENST00000514777 LRRC59Q96AG4 307 aaKnown RBP20.25■□□□□ 0.83
SMAD5-209ENST00000514777 NUP155O75694 1391 aa20.24■□□□□ 0.83
SMAD5-209ENST00000514777 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
SMAD5-209ENST00000514777 QTRT2Q9H974 415 aaKnown RBP20.24■□□□□ 0.83
SMAD5-209ENST00000514777 RGS12O14924 1447 aa20.23■□□□□ 0.83
SMAD5-209ENST00000514777 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
SMAD5-209ENST00000514777 C8orf37Q96NL8 207 aa20.22■□□□□ 0.83
SMAD5-209ENST00000514777 RBM6P78332 1123 aaKnown RBP20.21■□□□□ 0.83
SMAD5-209ENST00000514777 SPHKAPQ2M3C7 1700 aa20.2■□□□□ 0.82
SMAD5-209ENST00000514777 NALCNQ8IZF0 1738 aa20.2■□□□□ 0.82
SMAD5-209ENST00000514777 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
SMAD5-209ENST00000514777 ZNF326Q5BKZ1 582 aaKnown RBP20.16■□□□□ 0.82
SMAD5-209ENST00000514777 LAMC1P11047 1609 aa20.15■□□□□ 0.82
SMAD5-209ENST00000514777 NEXMIFQ5QGS0 1516 aa20.14■□□□□ 0.81
SMAD5-209ENST00000514777 C1orf167Q5SNV9 1468 aa20.14■□□□□ 0.81
SMAD5-209ENST00000514777 ADAMTS2O95450 1211 aa20.14■□□□□ 0.81
SMAD5-209ENST00000514777 NGLY1Q96IV0 654 aa20.14■□□□□ 0.81
SMAD5-209ENST00000514777 SRCAPQ6ZRS2 3230 aa20.14■□□□□ 0.81
SMAD5-209ENST00000514777 CLTCL1P53675 1640 aa20.12■□□□□ 0.81
SMAD5-209ENST00000514777 SOS2Q07890 1332 aaPredicted RBP20.11■□□□□ 0.81
SMAD5-209ENST00000514777 ITGAEP38570 1179 aa20.11■□□□□ 0.81
SMAD5-209ENST00000514777 ORAI2Q96SN7 254 aa20.11■□□□□ 0.81
SMAD5-209ENST00000514777 FNBP4Q8N3X1 1017 aaPredicted RBP20.08■□□□□ 0.81
SMAD5-209ENST00000514777 USP21Q9UK80 565 aa20.08■□□□□ 0.81
SMAD5-209ENST00000514777 KIF1BO60333 1816 aa20.08■□□□□ 0.8
SMAD5-209ENST00000514777 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
SMAD5-209ENST00000514777 ATAD2Q6PL18 1390 aa20.06■□□□□ 0.8
SMAD5-209ENST00000514777 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
SMAD5-209ENST00000514777 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
SMAD5-209ENST00000514777 COL22A1Q8NFW1 1626 aaPredicted RBP20.04■□□□□ 0.8
SMAD5-209ENST00000514777 ATRNO75882 1429 aa20.03■□□□□ 0.8
SMAD5-209ENST00000514777 EP400Q96L91 3159 aa20.02■□□□□ 0.8
SMAD5-209ENST00000514777 MARF1Q9Y4F3 1742 aaKnown RBP20■□□□□ 0.79
SMAD5-209ENST00000514777 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
SMAD5-209ENST00000514777 BCL9LQ86UU0 1499 aa19.99■□□□□ 0.79
SMAD5-209ENST00000514777 MYOM2P54296 1465 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 281.9 ms