RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 PPP1R9BQ96SB3 815 aa15.68■□□□□ 0.1
ATP2C1-221ENST00000513801 ZNF777Q9ULD5 760 aaPredicted RBP15.68■□□□□ 0.1
ATP2C1-221ENST00000513801 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
ATP2C1-221ENST00000513801 NAP1L2Q9ULW6 460 aaPredicted RBP15.67■□□□□ 0.1
ATP2C1-221ENST00000513801 PZPP20742 1482 aa15.67■□□□□ 0.1
ATP2C1-221ENST00000513801 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
ATP2C1-221ENST00000513801 SSFA2P28290 1259 aa15.66■□□□□ 0.1
ATP2C1-221ENST00000513801 DMTNQ08495 405 aa15.66■□□□□ 0.1
ATP2C1-221ENST00000513801 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
ATP2C1-221ENST00000513801 PPP2R1AP30153 589 aa15.66■□□□□ 0.1
ATP2C1-221ENST00000513801 ANP32BQ92688 251 aaKnown RBP15.66■□□□□ 0.1
ATP2C1-221ENST00000513801 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
ATP2C1-221ENST00000513801 PPP4R3BQ5MIZ7 849 aa15.65■□□□□ 0.1
ATP2C1-221ENST00000513801 MAP7D2Q96T17 732 aa15.65■□□□□ 0.1
ATP2C1-221ENST00000513801 DDX49Q9Y6V7 483 aaKnown RBP15.65■□□□□ 0.1
ATP2C1-221ENST00000513801 HSP90AB1P08238 724 aaKnown RBP15.65■□□□□ 0.1
ATP2C1-221ENST00000513801 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
ATP2C1-221ENST00000513801 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
ATP2C1-221ENST00000513801 CHAMP1Q96JM3 812 aa15.64■□□□□ 0.09
ATP2C1-221ENST00000513801 ABCC5O15440 1437 aa15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 CGNL1Q0VF96 1302 aa15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 RBSNQ9H1K0 784 aa15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 PDIA4P13667 645 aaKnown RBP15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
ATP2C1-221ENST00000513801 DAPK1P53355 1430 aa15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 RTEL1-TNFRSF6BF6WH68 1400 aa15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 CAVIN1Q6NZI2 390 aaKnown RBP15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 VIRMAQ69YN4 1812 aaKnown RBP15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 DDIT3P35638 169 aa15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
ATP2C1-221ENST00000513801 TRMT2AQ8IZ69 625 aaKnown RBP15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 GBP4Q96PP9 640 aa15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 RALGAPBQ86X10 1494 aa15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 EHBP1L1Q8N3D4 1523 aa15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 KIAA1107Q9UPP5 1409 aa15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 KIF14Q15058 1648 aa15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 ATP2B3Q16720 1220 aa15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 CCDC94Q9BW85 323 aaPredicted RBP15.61■□□□□ 0.09
ATP2C1-221ENST00000513801 RBM27Q9P2N5 1060 aaKnown RBP15.6■□□□□ 0.09
ATP2C1-221ENST00000513801 RAB3GAP1Q15042 981 aa15.59■□□□□ 0.09
ATP2C1-221ENST00000513801 NOL7Q9UMY1 257 aaKnown RBP15.59■□□□□ 0.09
ATP2C1-221ENST00000513801 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
ATP2C1-221ENST00000513801 KIF21AQ7Z4S6 1674 aa15.59■□□□□ 0.09
ATP2C1-221ENST00000513801 NKTRP30414 1462 aaKnown RBP15.58■□□□□ 0.09
ATP2C1-221ENST00000513801 DYNC1I1O14576 645 aa15.58■□□□□ 0.09
ATP2C1-221ENST00000513801 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.09
ATP2C1-221ENST00000513801 PDE3AQ14432 1141 aa15.58■□□□□ 0.09
ATP2C1-221ENST00000513801 RNF214Q8ND24 703 aa15.58■□□□□ 0.09
ATP2C1-221ENST00000513801 TMEM51Q9NW97 253 aa15.58■□□□□ 0.09
ATP2C1-221ENST00000513801 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
ATP2C1-221ENST00000513801 MCTP1Q6DN14 999 aa15.57■□□□□ 0.08
ATP2C1-221ENST00000513801 ZNF710Q8N1W2 664 aa15.57■□□□□ 0.08
ATP2C1-221ENST00000513801 TESK2Q96S53 571 aa15.57■□□□□ 0.08
ATP2C1-221ENST00000513801 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
ATP2C1-221ENST00000513801 TERF1P54274 439 aa15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 DNTTIP2Q5QJE6 756 aaKnown RBP15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 ZNF830Q96NB3 372 aaPredicted RBP15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 PLEKHH2Q8IVE3 1493 aa15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 ZNF500O60304 480 aaPredicted RBP15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 GAS2L2Q8NHY3 880 aa15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
ATP2C1-221ENST00000513801 SKOR2Q2VWA4 1001 aaPredicted RBP15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 E9PCH4 1651 aa15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 NUP155O75694 1391 aa15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 KIAA0586Q9BVV6 1533 aa15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 PKP1Q13835 747 aa15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 ZSCAN23Q3MJ62 389 aa15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 UTP14CQ5TAP6 766 aaKnown RBP15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 ZKSCAN5Q9Y2L8 839 aa15.55■□□□□ 0.08
ATP2C1-221ENST00000513801 E9PSI1 815 aa15.54■□□□□ 0.08
ATP2C1-221ENST00000513801 SASS6Q6UVJ0 657 aa15.54■□□□□ 0.08
ATP2C1-221ENST00000513801 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
ATP2C1-221ENST00000513801 BAG4O95429 457 aaKnown RBP15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 RWDD1Q9H446 243 aaPredicted RBP15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 CGNQ9P2M7 1197 aaKnown RBP15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 FOXD4L5Q5VV16 416 aaPredicted RBP15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 FOXD4L4Q8WXT5 416 aaPredicted RBP15.53■□□□□ 0.08
ATP2C1-221ENST00000513801 RARSP54136 660 aaKnown RBP15.52■□□□□ 0.07
ATP2C1-221ENST00000513801 ROCK1Q13464 1354 aa15.52■□□□□ 0.07
ATP2C1-221ENST00000513801 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
ATP2C1-221ENST00000513801 KLHL40Q2TBA0 621 aa15.5■□□□□ 0.07
ATP2C1-221ENST00000513801 PAXIP1Q6ZW49 1069 aaPredicted RBP15.5■□□□□ 0.07
ATP2C1-221ENST00000513801 KIF2CQ99661 725 aa15.5■□□□□ 0.07
ATP2C1-221ENST00000513801 NSFL1CQ9UNZ2 370 aaKnown RBP15.5■□□□□ 0.07
ATP2C1-221ENST00000513801 TPRNQ4KMQ1 711 aa15.49■□□□□ 0.07
ATP2C1-221ENST00000513801 WWC1Q8IX03 1113 aa15.49■□□□□ 0.07
ATP2C1-221ENST00000513801 LNPKQ9C0E8 428 aa15.49■□□□□ 0.07
ATP2C1-221ENST00000513801 PRPF40AO75400 957 aaKnown RBP15.49■□□□□ 0.07
ATP2C1-221ENST00000513801 MTERF4Q7Z6M4 381 aaKnown RBP15.49■□□□□ 0.07
ATP2C1-221ENST00000513801 PDLIM2Q96JY6 352 aa15.49■□□□□ 0.07
ATP2C1-221ENST00000513801 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
ATP2C1-221ENST00000513801 SYCE3A1L190 88 aa15.48■□□□□ 0.07
ATP2C1-221ENST00000513801 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms