RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 UPF1Q92900 1129 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDR1-267ENST00000512336 DAPK1P53355 1430 aa19.28■□□□□ 0.68
DDR1-267ENST00000512336 PTPN23Q9H3S7 1636 aa19.27■□□□□ 0.68
DDR1-267ENST00000512336 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
DDR1-267ENST00000512336 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
DDR1-267ENST00000512336 SPATA31A6Q5VVP1 1343 aa19.25■□□□□ 0.67
DDR1-267ENST00000512336 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
DDR1-267ENST00000512336 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
DDR1-267ENST00000512336 PLEKHG1Q9ULL1 1385 aa19.24■□□□□ 0.67
DDR1-267ENST00000512336 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
DDR1-267ENST00000512336 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
DDR1-267ENST00000512336 ZFYVE9O95405 1425 aa19.24■□□□□ 0.67
DDR1-267ENST00000512336 CHD2O14647 1828 aaKnown RBP19.23■□□□□ 0.67
DDR1-267ENST00000512336 ANKRD30AQ9BXX3 1397 aa19.23■□□□□ 0.67
DDR1-267ENST00000512336 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
DDR1-267ENST00000512336 C14orf37Q86TY3 774 aa19.21■□□□□ 0.67
DDR1-267ENST00000512336 RIMS2Q9UQ26 1411 aa19.21■□□□□ 0.67
DDR1-267ENST00000512336 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
DDR1-267ENST00000512336 AHDC1Q5TGY3 1603 aaPredicted RBP19.2■□□□□ 0.66
DDR1-267ENST00000512336 SHPRHQ149N8 1683 aa19.19■□□□□ 0.66
DDR1-267ENST00000512336 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
DDR1-267ENST00000512336 SRCAPQ6ZRS2 3230 aa19.18■□□□□ 0.66
DDR1-267ENST00000512336 TBX22Q9Y458 520 aa19.18■□□□□ 0.66
DDR1-267ENST00000512336 GCC2Q8IWJ2 1684 aa19.17■□□□□ 0.66
DDR1-267ENST00000512336 RXRBP28702 533 aa19.17■□□□□ 0.66
DDR1-267ENST00000512336 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
DDR1-267ENST00000512336 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
DDR1-267ENST00000512336 TMEM131LA2VDJ0 1609 aa19.16■□□□□ 0.66
DDR1-267ENST00000512336 HDGFP51858 240 aaKnown RBP19.16■□□□□ 0.66
DDR1-267ENST00000512336 CADPS2Q86UW7 1296 aa19.16■□□□□ 0.66
DDR1-267ENST00000512336 ATF3P18847 181 aa19.15■□□□□ 0.66
DDR1-267ENST00000512336 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
DDR1-267ENST00000512336 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
DDR1-267ENST00000512336 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
DDR1-267ENST00000512336 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
DDR1-267ENST00000512336 C19orf44Q9H6X5 657 aa19.14■□□□□ 0.65
DDR1-267ENST00000512336 ADAMTS13Q76LX8 1427 aa19.14■□□□□ 0.65
DDR1-267ENST00000512336 DIP2AQ14689 1571 aa19.14■□□□□ 0.65
DDR1-267ENST00000512336 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
DDR1-267ENST00000512336 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
DDR1-267ENST00000512336 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
DDR1-267ENST00000512336 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
DDR1-267ENST00000512336 BRINP3Q76B58 766 aa19.12■□□□□ 0.65
DDR1-267ENST00000512336 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
DDR1-267ENST00000512336 AFF2P51816 1311 aa19.1■□□□□ 0.65
DDR1-267ENST00000512336 PIK3R4Q99570 1358 aa19.09■□□□□ 0.65
DDR1-267ENST00000512336 ANKRD50Q9ULJ7 1429 aa19.08■□□□□ 0.65
DDR1-267ENST00000512336 APLP2Q06481 763 aa19.07■□□□□ 0.64
DDR1-267ENST00000512336 PTPRUQ92729 1446 aa19.07■□□□□ 0.64
DDR1-267ENST00000512336 ASXL1Q8IXJ9 1541 aa19.06■□□□□ 0.64
DDR1-267ENST00000512336 AMOTL2Q9Y2J4 779 aa19.06■□□□□ 0.64
DDR1-267ENST00000512336 RGS12O14924 1447 aa19.06■□□□□ 0.64
DDR1-267ENST00000512336 TRPM2O94759 1503 aa19.05■□□□□ 0.64
DDR1-267ENST00000512336 SETD5Q9C0A6 1442 aa19.05■□□□□ 0.64
DDR1-267ENST00000512336 DCCP43146 1447 aa19.03■□□□□ 0.64
DDR1-267ENST00000512336 C8orf37Q96NL8 207 aa19.02■□□□□ 0.64
DDR1-267ENST00000512336 NHSL1Q5SYE7 1610 aa19.02■□□□□ 0.64
DDR1-267ENST00000512336 UNC13BO14795 1591 aa19.02■□□□□ 0.63
DDR1-267ENST00000512336 MST1RQ04912 1400 aa19.01■□□□□ 0.63
DDR1-267ENST00000512336 FAM50AQ14320 339 aaKnown RBP19.01■□□□□ 0.63
DDR1-267ENST00000512336 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
DDR1-267ENST00000512336 E9PCH4 1651 aa19.01■□□□□ 0.63
DDR1-267ENST00000512336 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
DDR1-267ENST00000512336 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
DDR1-267ENST00000512336 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
DDR1-267ENST00000512336 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
DDR1-267ENST00000512336 PNPLA6Q8IY17 1366 aa18.98■□□□□ 0.63
DDR1-267ENST00000512336 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
DDR1-267ENST00000512336 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
DDR1-267ENST00000512336 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
DDR1-267ENST00000512336 METP08581 1390 aa18.93■□□□□ 0.62
DDR1-267ENST00000512336 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
DDR1-267ENST00000512336 ADGRL3Q9HAR2 1447 aa18.92■□□□□ 0.62
DDR1-267ENST00000512336 NGLY1Q96IV0 654 aa18.92■□□□□ 0.62
DDR1-267ENST00000512336 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
DDR1-267ENST00000512336 EP400Q96L91 3159 aa18.91■□□□□ 0.62
DDR1-267ENST00000512336 NALCNQ8IZF0 1738 aa18.89■□□□□ 0.61
DDR1-267ENST00000512336 NUP155O75694 1391 aa18.87■□□□□ 0.61
DDR1-267ENST00000512336 USP21Q9UK80 565 aa18.87■□□□□ 0.61
DDR1-267ENST00000512336 C1orf167Q5SNV9 1468 aa18.86■□□□□ 0.61
DDR1-267ENST00000512336 ZNF326Q5BKZ1 582 aaKnown RBP18.86■□□□□ 0.61
DDR1-267ENST00000512336 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
DDR1-267ENST00000512336 TRPC5Q9UL62 973 aaPredicted RBP18.85■□□□□ 0.61
DDR1-267ENST00000512336 ROCK1Q13464 1354 aa18.84■□□□□ 0.61
DDR1-267ENST00000512336 LAMC1P11047 1609 aa18.83■□□□□ 0.61
DDR1-267ENST00000512336 SOS2Q07890 1332 aaPredicted RBP18.82■□□□□ 0.6
DDR1-267ENST00000512336 ATRNO75882 1429 aa18.82■□□□□ 0.6
DDR1-267ENST00000512336 PTCH1Q13635 1447 aa18.82■□□□□ 0.6
DDR1-267ENST00000512336 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
DDR1-267ENST00000512336 FOXD1Q16676 465 aa18.81■□□□□ 0.6
DDR1-267ENST00000512336 FNBP4Q8N3X1 1017 aaPredicted RBP18.81■□□□□ 0.6
DDR1-267ENST00000512336 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
DDR1-267ENST00000512336 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
DDR1-267ENST00000512336 COL22A1Q8NFW1 1626 aaPredicted RBP18.77■□□□□ 0.6
DDR1-267ENST00000512336 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
DDR1-267ENST00000512336 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
DDR1-267ENST00000512336 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
DDR1-267ENST00000512336 MYOM2P54296 1465 aa18.75■□□□□ 0.59
DDR1-267ENST00000512336 BCL9LQ86UU0 1499 aa18.74■□□□□ 0.59
DDR1-267ENST00000512336 ITGAEP38570 1179 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms