RNA–Protein interactions for RNA: ENST00000512286.1

SEL1L3-208, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 739 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-208ENST00000512286 NUP155O75694 1391 aa18.24■□□□□ 0.51
SEL1L3-208ENST00000512286 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
SEL1L3-208ENST00000512286 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
SEL1L3-208ENST00000512286 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
SEL1L3-208ENST00000512286 MYO5BQ9ULV0 1848 aa18.22■□□□□ 0.51
SEL1L3-208ENST00000512286 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
SEL1L3-208ENST00000512286 ZFYVE9O95405 1425 aa18.21■□□□□ 0.51
SEL1L3-208ENST00000512286 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
SEL1L3-208ENST00000512286 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
SEL1L3-208ENST00000512286 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
SEL1L3-208ENST00000512286 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
SEL1L3-208ENST00000512286 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
SEL1L3-208ENST00000512286 XIRP1Q702N8 1843 aaKnown RBP18.18■□□□□ 0.5
SEL1L3-208ENST00000512286 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
SEL1L3-208ENST00000512286 KCNA6P17658 529 aa18.17■□□□□ 0.5
SEL1L3-208ENST00000512286 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEL1L3-208ENST00000512286 NKTRP30414 1462 aaKnown RBP18.17■□□□□ 0.5
SEL1L3-208ENST00000512286 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
SEL1L3-208ENST00000512286 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
SEL1L3-208ENST00000512286 SLC26A8Q96RN1 970 aa18.15■□□□□ 0.5
SEL1L3-208ENST00000512286 NAIPQ13075 1403 aa18.15■□□□□ 0.5
SEL1L3-208ENST00000512286 NPM3O75607 178 aaKnown RBP18.14■□□□□ 0.49
SEL1L3-208ENST00000512286 HSPA1LP34931 641 aa18.14■□□□□ 0.49
SEL1L3-208ENST00000512286 BCANQ96GW7 911 aa18.14■□□□□ 0.49
SEL1L3-208ENST00000512286 DIP2AQ14689 1571 aa18.13■□□□□ 0.49
SEL1L3-208ENST00000512286 CHGAP10645 457 aaKnown RBP18.13■□□□□ 0.49
SEL1L3-208ENST00000512286 CHD2O14647 1828 aaKnown RBP18.12■□□□□ 0.49
SEL1L3-208ENST00000512286 TMEM94Q12767 1356 aa18.12■□□□□ 0.49
SEL1L3-208ENST00000512286 HFM1A2PYH4 1435 aa18.12■□□□□ 0.49
SEL1L3-208ENST00000512286 PROSER2Q86WR7 435 aaPredicted RBP18.09■□□□□ 0.49
SEL1L3-208ENST00000512286 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
SEL1L3-208ENST00000512286 TRPM2O94759 1503 aa18.08■□□□□ 0.49
SEL1L3-208ENST00000512286 PIK3R4Q99570 1358 aa18.08■□□□□ 0.49
SEL1L3-208ENST00000512286 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
SEL1L3-208ENST00000512286 ADAMTS13Q76LX8 1427 aa18.06■□□□□ 0.48
SEL1L3-208ENST00000512286 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
SEL1L3-208ENST00000512286 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
SEL1L3-208ENST00000512286 MSH6P52701 1360 aa18.04■□□□□ 0.48
SEL1L3-208ENST00000512286 KIF1BO60333 1816 aa18.04■□□□□ 0.48
SEL1L3-208ENST00000512286 CLTCL1P53675 1640 aa18.04■□□□□ 0.48
SEL1L3-208ENST00000512286 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
SEL1L3-208ENST00000512286 ILDR2Q71H61 639 aa18.02■□□□□ 0.48
SEL1L3-208ENST00000512286 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
SEL1L3-208ENST00000512286 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
SEL1L3-208ENST00000512286 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
SEL1L3-208ENST00000512286 TRIM52Q96A61 297 aa18■□□□□ 0.47
SEL1L3-208ENST00000512286 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
SEL1L3-208ENST00000512286 NRXN3Q9Y4C0 1643 aa17.99■□□□□ 0.47
SEL1L3-208ENST00000512286 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
SEL1L3-208ENST00000512286 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
SEL1L3-208ENST00000512286 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
SEL1L3-208ENST00000512286 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
SEL1L3-208ENST00000512286 SOCS7O14512 581 aa17.96■□□□□ 0.47
SEL1L3-208ENST00000512286 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
SEL1L3-208ENST00000512286 SLAIN2Q9P270 581 aa17.94■□□□□ 0.46
SEL1L3-208ENST00000512286 AMOTL2Q9Y2J4 779 aa17.94■□□□□ 0.46
SEL1L3-208ENST00000512286 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.93■□□□□ 0.46
SEL1L3-208ENST00000512286 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
SEL1L3-208ENST00000512286 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
SEL1L3-208ENST00000512286 C19orf44Q9H6X5 657 aa17.93■□□□□ 0.46
SEL1L3-208ENST00000512286 RPGRIP1LQ68CZ1 1315 aa17.92■□□□□ 0.46
SEL1L3-208ENST00000512286 DCCP43146 1447 aa17.91■□□□□ 0.46
SEL1L3-208ENST00000512286 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
SEL1L3-208ENST00000512286 PHLPP1O60346 1717 aa17.89■□□□□ 0.46
SEL1L3-208ENST00000512286 ATF3P18847 181 aa17.89■□□□□ 0.45
SEL1L3-208ENST00000512286 PPLO60437 1756 aa17.89■□□□□ 0.45
SEL1L3-208ENST00000512286 METP08581 1390 aa17.88■□□□□ 0.45
SEL1L3-208ENST00000512286 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
SEL1L3-208ENST00000512286 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
SEL1L3-208ENST00000512286 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
SEL1L3-208ENST00000512286 MPHOSPH9Q99550 1183 aa17.85■□□□□ 0.45
SEL1L3-208ENST00000512286 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
SEL1L3-208ENST00000512286 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
SEL1L3-208ENST00000512286 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
SEL1L3-208ENST00000512286 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
SEL1L3-208ENST00000512286 ADGRL3Q9HAR2 1447 aa17.83■□□□□ 0.45
SEL1L3-208ENST00000512286 JCADQ9P266 1359 aa17.83■□□□□ 0.45
SEL1L3-208ENST00000512286 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
SEL1L3-208ENST00000512286 IFT172Q9UG01 1749 aa17.81■□□□□ 0.44
SEL1L3-208ENST00000512286 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
SEL1L3-208ENST00000512286 ANKRD30BQ9BXX2 1392 aa17.79■□□□□ 0.44
SEL1L3-208ENST00000512286 MST1RQ04912 1400 aa17.79■□□□□ 0.44
SEL1L3-208ENST00000512286 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
SEL1L3-208ENST00000512286 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
SEL1L3-208ENST00000512286 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
SEL1L3-208ENST00000512286 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
SEL1L3-208ENST00000512286 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
SEL1L3-208ENST00000512286 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
SEL1L3-208ENST00000512286 ROBO2Q9HCK4 1378 aa17.74■□□□□ 0.43
SEL1L3-208ENST00000512286 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
SEL1L3-208ENST00000512286 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
SEL1L3-208ENST00000512286 RGS17Q9UGC6 210 aaPredicted RBP17.73■□□□□ 0.43
SEL1L3-208ENST00000512286 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
SEL1L3-208ENST00000512286 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
SEL1L3-208ENST00000512286 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
SEL1L3-208ENST00000512286 TECPR2O15040 1411 aa17.71■□□□□ 0.43
SEL1L3-208ENST00000512286 LAMC1P11047 1609 aa17.7■□□□□ 0.42
SEL1L3-208ENST00000512286 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
SEL1L3-208ENST00000512286 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
SEL1L3-208ENST00000512286 MYOM2P54296 1465 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms