RNA–Protein interactions for RNA: ENST00000512286.1

SEL1L3-208, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 739 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-208ENST00000512286 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
SEL1L3-208ENST00000512286 CCDC180Q9P1Z9 1646 aa26.69■■□□□ 1.86
SEL1L3-208ENST00000512286 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
SEL1L3-208ENST00000512286 ABCC9O60706 1549 aa26.34■■□□□ 1.81
SEL1L3-208ENST00000512286 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
SEL1L3-208ENST00000512286 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
SEL1L3-208ENST00000512286 NACADO15069 1562 aa25.16■■□□□ 1.62
SEL1L3-208ENST00000512286 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
SEL1L3-208ENST00000512286 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
SEL1L3-208ENST00000512286 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
SEL1L3-208ENST00000512286 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
SEL1L3-208ENST00000512286 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
SEL1L3-208ENST00000512286 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
SEL1L3-208ENST00000512286 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
SEL1L3-208ENST00000512286 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
SEL1L3-208ENST00000512286 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
SEL1L3-208ENST00000512286 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
SEL1L3-208ENST00000512286 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
SEL1L3-208ENST00000512286 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
SEL1L3-208ENST00000512286 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
SEL1L3-208ENST00000512286 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
SEL1L3-208ENST00000512286 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
SEL1L3-208ENST00000512286 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
SEL1L3-208ENST00000512286 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
SEL1L3-208ENST00000512286 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
SEL1L3-208ENST00000512286 HMGXB3Q12766 1538 aa23.08■■□□□ 1.28
SEL1L3-208ENST00000512286 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
SEL1L3-208ENST00000512286 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
SEL1L3-208ENST00000512286 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
SEL1L3-208ENST00000512286 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
SEL1L3-208ENST00000512286 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
SEL1L3-208ENST00000512286 CUX2O14529 1486 aa22.73■■□□□ 1.23
SEL1L3-208ENST00000512286 NESP48681 1621 aa22.68■■□□□ 1.22
SEL1L3-208ENST00000512286 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
SEL1L3-208ENST00000512286 WIZO95785 1651 aa22.62■■□□□ 1.21
SEL1L3-208ENST00000512286 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
SEL1L3-208ENST00000512286 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
SEL1L3-208ENST00000512286 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
SEL1L3-208ENST00000512286 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
SEL1L3-208ENST00000512286 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
SEL1L3-208ENST00000512286 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
SEL1L3-208ENST00000512286 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
SEL1L3-208ENST00000512286 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
SEL1L3-208ENST00000512286 CFTRP13569 1480 aa22.28■■□□□ 1.16
SEL1L3-208ENST00000512286 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
SEL1L3-208ENST00000512286 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
SEL1L3-208ENST00000512286 WDR62O43379 1518 aa22.24■■□□□ 1.15
SEL1L3-208ENST00000512286 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
SEL1L3-208ENST00000512286 PRDM2Q13029 1718 aa22.14■■□□□ 1.14
SEL1L3-208ENST00000512286 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
SEL1L3-208ENST00000512286 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
SEL1L3-208ENST00000512286 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
SEL1L3-208ENST00000512286 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
SEL1L3-208ENST00000512286 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
SEL1L3-208ENST00000512286 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
SEL1L3-208ENST00000512286 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
SEL1L3-208ENST00000512286 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
SEL1L3-208ENST00000512286 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
SEL1L3-208ENST00000512286 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
SEL1L3-208ENST00000512286 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
SEL1L3-208ENST00000512286 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
SEL1L3-208ENST00000512286 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
SEL1L3-208ENST00000512286 SOGA1O94964 1423 aa21.5■■□□□ 1.03
SEL1L3-208ENST00000512286 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
SEL1L3-208ENST00000512286 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
SEL1L3-208ENST00000512286 CUX1P39880 1505 aa21.5■■□□□ 1.03
SEL1L3-208ENST00000512286 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
SEL1L3-208ENST00000512286 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
SEL1L3-208ENST00000512286 CHD1O14646 1710 aa21.42■■□□□ 1.02
SEL1L3-208ENST00000512286 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
SEL1L3-208ENST00000512286 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
SEL1L3-208ENST00000512286 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
SEL1L3-208ENST00000512286 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
SEL1L3-208ENST00000512286 MAGI1Q96QZ7 1491 aaPredicted RBP21.33■■□□□ 1.01
SEL1L3-208ENST00000512286 ARHGEF11O15085 1522 aa21.33■■□□□ 1
SEL1L3-208ENST00000512286 GRIN2BQ13224 1484 aa21.32■■□□□ 1
SEL1L3-208ENST00000512286 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
SEL1L3-208ENST00000512286 FBLN2P98095 1184 aa21.3■■□□□ 1
SEL1L3-208ENST00000512286 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
SEL1L3-208ENST00000512286 BIVM-ERCC5R4GMW8 1640 aa21.27■■□□□ 1
SEL1L3-208ENST00000512286 PBRM1Q86U86 1689 aa21.27■■□□□ 1
SEL1L3-208ENST00000512286 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
SEL1L3-208ENST00000512286 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
SEL1L3-208ENST00000512286 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
SEL1L3-208ENST00000512286 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
SEL1L3-208ENST00000512286 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
SEL1L3-208ENST00000512286 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
SEL1L3-208ENST00000512286 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
SEL1L3-208ENST00000512286 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
SEL1L3-208ENST00000512286 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
SEL1L3-208ENST00000512286 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
SEL1L3-208ENST00000512286 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
SEL1L3-208ENST00000512286 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
SEL1L3-208ENST00000512286 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
SEL1L3-208ENST00000512286 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
SEL1L3-208ENST00000512286 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
SEL1L3-208ENST00000512286 NUP160Q12769 1436 aa20.96■□□□□ 0.95
SEL1L3-208ENST00000512286 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
SEL1L3-208ENST00000512286 SHROOM2Q13796 1616 aa20.88■□□□□ 0.93
SEL1L3-208ENST00000512286 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms