RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
CLDND1-225ENST00000512147 PNPLA6Q8IY17 1366 aa10.8□□□□□ -0.68
CLDND1-225ENST00000512147 KDM5AP29375 1690 aaKnown RBP10.8□□□□□ -0.68
CLDND1-225ENST00000512147 SAMD9LQ8IVG5 1584 aa10.79□□□□□ -0.68
CLDND1-225ENST00000512147 KCNQ2O43526 872 aa10.79□□□□□ -0.68
CLDND1-225ENST00000512147 SAMD9Q5K651 1589 aa10.78□□□□□ -0.68
CLDND1-225ENST00000512147 C19orf44Q9H6X5 657 aa10.78□□□□□ -0.68
CLDND1-225ENST00000512147 NCOA2Q15596 1464 aa10.78□□□□□ -0.68
CLDND1-225ENST00000512147 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
CLDND1-225ENST00000512147 KRT27Q7Z3Y8 459 aa10.76□□□□□ -0.69
CLDND1-225ENST00000512147 SEPT12Q8IYM1 358 aa10.76□□□□□ -0.69
CLDND1-225ENST00000512147 NCOA3Q9Y6Q9 1424 aa10.75□□□□□ -0.69
CLDND1-225ENST00000512147 SLIT1O75093 1534 aa10.75□□□□□ -0.69
CLDND1-225ENST00000512147 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLDND1-225ENST00000512147 PTCH1Q13635 1447 aa10.75□□□□□ -0.69
CLDND1-225ENST00000512147 KIF3BO15066 747 aa10.74□□□□□ -0.69
CLDND1-225ENST00000512147 BCANQ96GW7 911 aa10.74□□□□□ -0.69
CLDND1-225ENST00000512147 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
CLDND1-225ENST00000512147 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
CLDND1-225ENST00000512147 CDC42BPBQ9Y5S2 1711 aa10.74□□□□□ -0.69
CLDND1-225ENST00000512147 SPHKAPQ2M3C7 1700 aa10.73□□□□□ -0.69
CLDND1-225ENST00000512147 RANGAP1P46060 587 aaPredicted RBP10.73□□□□□ -0.69
CLDND1-225ENST00000512147 EZH2Q15910 746 aaKnown RBP10.73□□□□□ -0.69
CLDND1-225ENST00000512147 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
CLDND1-225ENST00000512147 MROH1Q8NDA8 1641 aa10.73□□□□□ -0.69
CLDND1-225ENST00000512147 NBPF8Q3BBV2 869 aa10.72□□□□□ -0.69
CLDND1-225ENST00000512147 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
CLDND1-225ENST00000512147 CLIP1P30622 1438 aa10.72□□□□□ -0.69
CLDND1-225ENST00000512147 UBR1Q8IWV7 1749 aa10.72□□□□□ -0.69
CLDND1-225ENST00000512147 WWC3Q9ULE0 1092 aa10.71□□□□□ -0.69
CLDND1-225ENST00000512147 MAST1Q9Y2H9 1570 aa10.71□□□□□ -0.69
CLDND1-225ENST00000512147 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
CLDND1-225ENST00000512147 ASXL1Q8IXJ9 1541 aa10.69□□□□□ -0.7
CLDND1-225ENST00000512147 ARHGAP35Q9NRY4 1499 aa10.69□□□□□ -0.7
CLDND1-225ENST00000512147 TMEM2Q9UHN6 1383 aa10.69□□□□□ -0.7
CLDND1-225ENST00000512147 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
CLDND1-225ENST00000512147 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
CLDND1-225ENST00000512147 TROQ12816 1431 aaPredicted RBP10.68□□□□□ -0.7
CLDND1-225ENST00000512147 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
CLDND1-225ENST00000512147 APLP1P51693 650 aa10.67□□□□□ -0.7
CLDND1-225ENST00000512147 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
CLDND1-225ENST00000512147 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-225ENST00000512147 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
CLDND1-225ENST00000512147 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
CLDND1-225ENST00000512147 INO80Q9ULG1 1556 aaPredicted RBP10.66□□□□□ -0.7
CLDND1-225ENST00000512147 DNAJC5GQ8N7S2 189 aa10.66□□□□□ -0.7
CLDND1-225ENST00000512147 CAMKK2Q96RR4 588 aa10.66□□□□□ -0.7
CLDND1-225ENST00000512147 TET3O43151 1660 aa10.66□□□□□ -0.7
CLDND1-225ENST00000512147 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
CLDND1-225ENST00000512147 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
CLDND1-225ENST00000512147 AATKQ6ZMQ8 1374 aa10.65□□□□□ -0.71
CLDND1-225ENST00000512147 SYCP2Q9BX26 1530 aa10.64□□□□□ -0.71
CLDND1-225ENST00000512147 A0A0G2JS52 829 aa10.64□□□□□ -0.71
CLDND1-225ENST00000512147 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
CLDND1-225ENST00000512147 MYT1Q01538 1121 aa10.64□□□□□ -0.71
CLDND1-225ENST00000512147 GLI3P10071 1580 aa10.64□□□□□ -0.71
CLDND1-225ENST00000512147 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
CLDND1-225ENST00000512147 UTRNP46939 3433 aa10.63□□□□□ -0.71
CLDND1-225ENST00000512147 GPR162Q16538 588 aa10.63□□□□□ -0.71
CLDND1-225ENST00000512147 PARD3Q8TEW0 1356 aa10.63□□□□□ -0.71
CLDND1-225ENST00000512147 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
CLDND1-225ENST00000512147 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
CLDND1-225ENST00000512147 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
CLDND1-225ENST00000512147 FHDC1Q9C0D6 1143 aaPredicted RBP10.61□□□□□ -0.71
CLDND1-225ENST00000512147 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
CLDND1-225ENST00000512147 CCDC9Q9Y3X0 531 aaKnown RBP10.61□□□□□ -0.71
CLDND1-225ENST00000512147 APBA3O96018 575 aa10.59□□□□□ -0.71
CLDND1-225ENST00000512147 KIAA1107Q9UPP5 1409 aa10.58□□□□□ -0.72
CLDND1-225ENST00000512147 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
CLDND1-225ENST00000512147 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
CLDND1-225ENST00000512147 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
CLDND1-225ENST00000512147 DCCP43146 1447 aa10.58□□□□□ -0.72
CLDND1-225ENST00000512147 JMYQ8N9B5 988 aa10.57□□□□□ -0.72
CLDND1-225ENST00000512147 PLEKHH2Q8IVE3 1493 aa10.56□□□□□ -0.72
CLDND1-225ENST00000512147 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
CLDND1-225ENST00000512147 VPS72Q15906 364 aa10.56□□□□□ -0.72
CLDND1-225ENST00000512147 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
CLDND1-225ENST00000512147 MST1RQ04912 1400 aa10.56□□□□□ -0.72
CLDND1-225ENST00000512147 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
CLDND1-225ENST00000512147 SOS2Q07890 1332 aaPredicted RBP10.55□□□□□ -0.72
CLDND1-225ENST00000512147 CFAP65Q6ZU64 1925 aaKnown RBP10.54□□□□□ -0.72
CLDND1-225ENST00000512147 FMN1Q68DA7 1419 aa10.54□□□□□ -0.72
CLDND1-225ENST00000512147 TBX22Q9Y458 520 aa10.54□□□□□ -0.72
CLDND1-225ENST00000512147 DLC1Q96QB1 1528 aa10.53□□□□□ -0.72
CLDND1-225ENST00000512147 ADGRB2O60241 1585 aa10.53□□□□□ -0.72
CLDND1-225ENST00000512147 TRIM37O94972 964 aa10.53□□□□□ -0.72
CLDND1-225ENST00000512147 PTGER2P43116 358 aa10.53□□□□□ -0.72
CLDND1-225ENST00000512147 TNS2Q63HR2 1409 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 ATP10DQ9P241 1426 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 ZBTB7AO95365 584 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 KLRG1Q96E93 195 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 CFDP1Q9UEE9 299 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-225ENST00000512147 MYOM2P54296 1465 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 SLIT2O94813 1529 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 EFCAB6Q5THR3 1501 aa10.52□□□□□ -0.73
CLDND1-225ENST00000512147 CDC42BPAQ5VT25 1732 aa10.51□□□□□ -0.73
CLDND1-225ENST00000512147 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
CLDND1-225ENST00000512147 ATF5Q9Y2D1 282 aaPredicted RBP10.51□□□□□ -0.73
CLDND1-225ENST00000512147 MARF1Q9Y4F3 1742 aaKnown RBP10.5□□□□□ -0.73
CLDND1-225ENST00000512147 HDGFP51858 240 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms