RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 LTKP29376 864 aa20.6■□□□□ 0.89
CLDND1-224ENST00000511667 E9PCH4 1651 aa20.6■□□□□ 0.89
CLDND1-224ENST00000511667 ADGRB3O60242 1522 aa20.58■□□□□ 0.89
CLDND1-224ENST00000511667 NAIPQ13075 1403 aa20.58■□□□□ 0.88
CLDND1-224ENST00000511667 JCADQ9P266 1359 aa20.56■□□□□ 0.88
CLDND1-224ENST00000511667 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
CLDND1-224ENST00000511667 ITGAEP38570 1179 aa20.54■□□□□ 0.88
CLDND1-224ENST00000511667 TXNDC2Q86VQ3 553 aa20.54■□□□□ 0.88
CLDND1-224ENST00000511667 NUP155O75694 1391 aa20.54■□□□□ 0.88
CLDND1-224ENST00000511667 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
CLDND1-224ENST00000511667 TMEM131LA2VDJ0 1609 aa20.53■□□□□ 0.88
CLDND1-224ENST00000511667 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-224ENST00000511667 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
CLDND1-224ENST00000511667 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
CLDND1-224ENST00000511667 SRCAPQ6ZRS2 3230 aa20.52■□□□□ 0.88
CLDND1-224ENST00000511667 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
CLDND1-224ENST00000511667 PHLPP1O60346 1717 aa20.5■□□□□ 0.87
CLDND1-224ENST00000511667 MYO5BQ9ULV0 1848 aa20.48■□□□□ 0.87
CLDND1-224ENST00000511667 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
CLDND1-224ENST00000511667 KCNA6P17658 529 aa20.46■□□□□ 0.87
CLDND1-224ENST00000511667 PROSER2Q86WR7 435 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-224ENST00000511667 SPATA31A6Q5VVP1 1343 aa20.46■□□□□ 0.87
CLDND1-224ENST00000511667 RXRBP28702 533 aa20.44■□□□□ 0.86
CLDND1-224ENST00000511667 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
CLDND1-224ENST00000511667 LRP6O75581 1613 aa20.43■□□□□ 0.86
CLDND1-224ENST00000511667 SPHKAPQ2M3C7 1700 aa20.43■□□□□ 0.86
CLDND1-224ENST00000511667 MSH6P52701 1360 aa20.43■□□□□ 0.86
CLDND1-224ENST00000511667 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-224ENST00000511667 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
CLDND1-224ENST00000511667 PLEKHG1Q9ULL1 1385 aa20.42■□□□□ 0.86
CLDND1-224ENST00000511667 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
CLDND1-224ENST00000511667 NKTRP30414 1462 aaKnown RBP20.4■□□□□ 0.86
CLDND1-224ENST00000511667 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-224ENST00000511667 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
CLDND1-224ENST00000511667 NWD1Q149M9 1564 aa20.39■□□□□ 0.85
CLDND1-224ENST00000511667 TRPM2O94759 1503 aa20.39■□□□□ 0.85
CLDND1-224ENST00000511667 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
CLDND1-224ENST00000511667 HDGFP51858 240 aaKnown RBP20.34■□□□□ 0.85
CLDND1-224ENST00000511667 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLDND1-224ENST00000511667 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
CLDND1-224ENST00000511667 CLTCL1P53675 1640 aa20.34■□□□□ 0.85
CLDND1-224ENST00000511667 TBX22Q9Y458 520 aa20.33■□□□□ 0.85
CLDND1-224ENST00000511667 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
CLDND1-224ENST00000511667 DIP2AQ14689 1571 aa20.32■□□□□ 0.84
CLDND1-224ENST00000511667 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
CLDND1-224ENST00000511667 FOXD1Q16676 465 aa20.31■□□□□ 0.84
CLDND1-224ENST00000511667 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
CLDND1-224ENST00000511667 PIK3R4Q99570 1358 aa20.29■□□□□ 0.84
CLDND1-224ENST00000511667 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
CLDND1-224ENST00000511667 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
CLDND1-224ENST00000511667 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.83
CLDND1-224ENST00000511667 AFF2P51816 1311 aa20.26■□□□□ 0.83
CLDND1-224ENST00000511667 CHGAP10645 457 aaKnown RBP20.25■□□□□ 0.83
CLDND1-224ENST00000511667 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
CLDND1-224ENST00000511667 RGS12O14924 1447 aa20.25■□□□□ 0.83
CLDND1-224ENST00000511667 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-224ENST00000511667 SLC4A1APQ9BWU0 796 aaKnown RBP20.24■□□□□ 0.83
CLDND1-224ENST00000511667 KIF1BO60333 1816 aa20.24■□□□□ 0.83
CLDND1-224ENST00000511667 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
CLDND1-224ENST00000511667 NUTM2BA6NNL0 878 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-224ENST00000511667 NUTM2EB1AL46 878 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-224ENST00000511667 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-224ENST00000511667 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-224ENST00000511667 BCANQ96GW7 911 aa20.23■□□□□ 0.83
CLDND1-224ENST00000511667 ACIN1Q9UKV3 1341 aaKnown RBP20.23■□□□□ 0.83
CLDND1-224ENST00000511667 RBM6P78332 1123 aaKnown RBP20.22■□□□□ 0.83
CLDND1-224ENST00000511667 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
CLDND1-224ENST00000511667 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
CLDND1-224ENST00000511667 C14orf37Q86TY3 774 aa20.2■□□□□ 0.82
CLDND1-224ENST00000511667 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
CLDND1-224ENST00000511667 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
CLDND1-224ENST00000511667 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
CLDND1-224ENST00000511667 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
CLDND1-224ENST00000511667 QTRT2Q9H974 415 aaKnown RBP20.18■□□□□ 0.82
CLDND1-224ENST00000511667 ATF3P18847 181 aa20.17■□□□□ 0.82
CLDND1-224ENST00000511667 RPGRIP1LQ68CZ1 1315 aa20.17■□□□□ 0.82
CLDND1-224ENST00000511667 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
CLDND1-224ENST00000511667 METP08581 1390 aa20.15■□□□□ 0.82
CLDND1-224ENST00000511667 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
CLDND1-224ENST00000511667 PPLO60437 1756 aa20.15■□□□□ 0.82
CLDND1-224ENST00000511667 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
CLDND1-224ENST00000511667 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
CLDND1-224ENST00000511667 RAB3GAP2Q9H2M9 1393 aa20.13■□□□□ 0.81
CLDND1-224ENST00000511667 HRCP23327 699 aa20.13■□□□□ 0.81
CLDND1-224ENST00000511667 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
CLDND1-224ENST00000511667 NGLY1Q96IV0 654 aa20.13■□□□□ 0.81
CLDND1-224ENST00000511667 C8orf37Q96NL8 207 aa20.13■□□□□ 0.81
CLDND1-224ENST00000511667 BRINP3Q76B58 766 aa20.12■□□□□ 0.81
CLDND1-224ENST00000511667 AMOTL2Q9Y2J4 779 aa20.12■□□□□ 0.81
CLDND1-224ENST00000511667 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
CLDND1-224ENST00000511667 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
CLDND1-224ENST00000511667 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
CLDND1-224ENST00000511667 LRRC59Q96AG4 307 aaKnown RBP20.07■□□□□ 0.8
CLDND1-224ENST00000511667 DCCP43146 1447 aa20.07■□□□□ 0.8
CLDND1-224ENST00000511667 CCDC125Q86Z20 511 aa20.05■□□□□ 0.8
CLDND1-224ENST00000511667 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
CLDND1-224ENST00000511667 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
CLDND1-224ENST00000511667 ANKRD30BQ9BXX2 1392 aa20.03■□□□□ 0.8
CLDND1-224ENST00000511667 NRXN1Q9ULB1 1477 aa20.02■□□□□ 0.8
CLDND1-224ENST00000511667 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms