RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
PFDN1-203ENST00000510217 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
PFDN1-203ENST00000510217 NWD1Q149M9 1564 aa15.64■□□□□ 0.09
PFDN1-203ENST00000510217 RIMS2Q9UQ26 1411 aa15.63■□□□□ 0.09
PFDN1-203ENST00000510217 TRPM2O94759 1503 aa15.61■□□□□ 0.09
PFDN1-203ENST00000510217 CLTCL1P53675 1640 aa15.61■□□□□ 0.09
PFDN1-203ENST00000510217 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
PFDN1-203ENST00000510217 NKTRP30414 1462 aaKnown RBP15.59■□□□□ 0.09
PFDN1-203ENST00000510217 DIP2AQ14689 1571 aa15.58■□□□□ 0.08
PFDN1-203ENST00000510217 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
PFDN1-203ENST00000510217 SLC26A8Q96RN1 970 aa15.57■□□□□ 0.08
PFDN1-203ENST00000510217 TOM1O60784 492 aa15.56■□□□□ 0.08
PFDN1-203ENST00000510217 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
PFDN1-203ENST00000510217 ADAMTS13Q76LX8 1427 aa15.55■□□□□ 0.08
PFDN1-203ENST00000510217 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
PFDN1-203ENST00000510217 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
PFDN1-203ENST00000510217 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
PFDN1-203ENST00000510217 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
PFDN1-203ENST00000510217 KIF1BO60333 1816 aa15.54■□□□□ 0.08
PFDN1-203ENST00000510217 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
PFDN1-203ENST00000510217 KCNA6P17658 529 aa15.53■□□□□ 0.08
PFDN1-203ENST00000510217 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
PFDN1-203ENST00000510217 TMEM94Q12767 1356 aa15.52■□□□□ 0.08
PFDN1-203ENST00000510217 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.08
PFDN1-203ENST00000510217 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
PFDN1-203ENST00000510217 HSPA1LP34931 641 aa15.5■□□□□ 0.07
PFDN1-203ENST00000510217 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
PFDN1-203ENST00000510217 BCANQ96GW7 911 aa15.5■□□□□ 0.07
PFDN1-203ENST00000510217 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
PFDN1-203ENST00000510217 XRN1Q8IZH2 1706 aaKnown RBP15.48■□□□□ 0.07
PFDN1-203ENST00000510217 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
PFDN1-203ENST00000510217 TBX22Q9Y458 520 aa15.48■□□□□ 0.07
PFDN1-203ENST00000510217 MED1Q15648 1581 aaPredicted RBP15.47■□□□□ 0.07
PFDN1-203ENST00000510217 PIK3R4Q99570 1358 aa15.47■□□□□ 0.07
PFDN1-203ENST00000510217 PROSER2Q86WR7 435 aaPredicted RBP15.46■□□□□ 0.07
PFDN1-203ENST00000510217 RBM33Q96EV2 1170 aaKnown RBP15.46■□□□□ 0.07
PFDN1-203ENST00000510217 ROBO1Q9Y6N7 1651 aa15.46■□□□□ 0.07
PFDN1-203ENST00000510217 PPLO60437 1756 aa15.46■□□□□ 0.07
PFDN1-203ENST00000510217 SETD1AO15047 1707 aaKnown RBP15.46■□□□□ 0.06
PFDN1-203ENST00000510217 PTPRUQ92729 1446 aa15.45■□□□□ 0.06
PFDN1-203ENST00000510217 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
PFDN1-203ENST00000510217 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
PFDN1-203ENST00000510217 MSH6P52701 1360 aa15.43■□□□□ 0.06
PFDN1-203ENST00000510217 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
PFDN1-203ENST00000510217 FAM135BQ49AJ0 1406 aa15.42■□□□□ 0.06
PFDN1-203ENST00000510217 NCOA3Q9Y6Q9 1424 aa15.42■□□□□ 0.06
PFDN1-203ENST00000510217 IFT172Q9UG01 1749 aa15.41■□□□□ 0.06
PFDN1-203ENST00000510217 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
PFDN1-203ENST00000510217 METP08581 1390 aa15.4■□□□□ 0.06
PFDN1-203ENST00000510217 KCNA4P22459 653 aa15.39■□□□□ 0.05
PFDN1-203ENST00000510217 CCDC144AA2RUR9 1427 aa15.38■□□□□ 0.05
PFDN1-203ENST00000510217 ILDR2Q71H61 639 aa15.38■□□□□ 0.05
PFDN1-203ENST00000510217 NALCNQ8IZF0 1738 aa15.37■□□□□ 0.05
PFDN1-203ENST00000510217 SPATA31E1Q6ZUB1 1445 aa15.37■□□□□ 0.05
PFDN1-203ENST00000510217 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
PFDN1-203ENST00000510217 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
PFDN1-203ENST00000510217 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
PFDN1-203ENST00000510217 PHLPP1O60346 1717 aa15.36■□□□□ 0.05
PFDN1-203ENST00000510217 DCCP43146 1447 aa15.34■□□□□ 0.05
PFDN1-203ENST00000510217 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
PFDN1-203ENST00000510217 COL16A1Q07092 1604 aaPredicted RBP15.34■□□□□ 0.05
PFDN1-203ENST00000510217 RPGRIP1LQ68CZ1 1315 aa15.34■□□□□ 0.05
PFDN1-203ENST00000510217 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
PFDN1-203ENST00000510217 VGFO15240 615 aaPredicted RBP15.32■□□□□ 0.04
PFDN1-203ENST00000510217 C14orf37Q86TY3 774 aa15.32■□□□□ 0.04
PFDN1-203ENST00000510217 SLAIN2Q9P270 581 aa15.32■□□□□ 0.04
PFDN1-203ENST00000510217 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
PFDN1-203ENST00000510217 ADGRL3Q9HAR2 1447 aa15.32■□□□□ 0.04
PFDN1-203ENST00000510217 AHDC1Q5TGY3 1603 aaPredicted RBP15.32■□□□□ 0.04
PFDN1-203ENST00000510217 C19orf44Q9H6X5 657 aa15.31■□□□□ 0.04
PFDN1-203ENST00000510217 ASXL1Q8IXJ9 1541 aa15.31■□□□□ 0.04
PFDN1-203ENST00000510217 CADPS2Q86UW7 1296 aa15.3■□□□□ 0.04
PFDN1-203ENST00000510217 MST1RQ04912 1400 aa15.29■□□□□ 0.04
PFDN1-203ENST00000510217 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
PFDN1-203ENST00000510217 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
PFDN1-203ENST00000510217 ANKRD30BQ9BXX2 1392 aa15.28■□□□□ 0.04
PFDN1-203ENST00000510217 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
PFDN1-203ENST00000510217 NHSL1Q5SYE7 1610 aa15.28■□□□□ 0.04
PFDN1-203ENST00000510217 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.04
PFDN1-203ENST00000510217 ATF3P18847 181 aa15.27■□□□□ 0.04
PFDN1-203ENST00000510217 MYOM2P54296 1465 aa15.26■□□□□ 0.03
PFDN1-203ENST00000510217 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
PFDN1-203ENST00000510217 SHPRHQ149N8 1683 aa15.25■□□□□ 0.03
PFDN1-203ENST00000510217 LAMC1P11047 1609 aa15.25■□□□□ 0.03
PFDN1-203ENST00000510217 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
PFDN1-203ENST00000510217 TECPR2O15040 1411 aa15.24■□□□□ 0.03
PFDN1-203ENST00000510217 BRINP3Q76B58 766 aa15.23■□□□□ 0.03
PFDN1-203ENST00000510217 CDC42BPGQ6DT37 1551 aa15.23■□□□□ 0.03
PFDN1-203ENST00000510217 JCADQ9P266 1359 aa15.23■□□□□ 0.03
PFDN1-203ENST00000510217 SOCS7O14512 581 aa15.22■□□□□ 0.03
PFDN1-203ENST00000510217 LRP6O75581 1613 aa15.21■□□□□ 0.02
PFDN1-203ENST00000510217 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
PFDN1-203ENST00000510217 LRPPRCP42704 1394 aaKnown RBP15.2■□□□□ 0.02
PFDN1-203ENST00000510217 HRCP23327 699 aa15.19■□□□□ 0.02
PFDN1-203ENST00000510217 RGS17Q9UGC6 210 aaPredicted RBP15.18■□□□□ 0.02
PFDN1-203ENST00000510217 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
PFDN1-203ENST00000510217 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
PFDN1-203ENST00000510217 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
PFDN1-203ENST00000510217 FMN2Q9NZ56 1722 aa15.15■□□□□ 0.02
PFDN1-203ENST00000510217 PLEKHH1Q9ULM0 1364 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms