RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 PIP4K2BP78356 416 aa32.12■■■□□ 2.73
LIN54-208ENST00000509748 XIRP1Q702N8 1843 aaKnown RBP32.12■■■□□ 2.73
LIN54-208ENST00000509748 PLEKHG1Q9ULL1 1385 aa32.11■■■□□ 2.73
LIN54-208ENST00000509748 KCNA6P17658 529 aa32.11■■■□□ 2.73
LIN54-208ENST00000509748 HDGFP51858 240 aaKnown RBP32.08■■■□□ 2.73
LIN54-208ENST00000509748 SPHKAPQ2M3C7 1700 aa32.08■■■□□ 2.73
LIN54-208ENST00000509748 SCAF1Q9H7N4 1312 aaKnown RBP32.06■■■□□ 2.72
LIN54-208ENST00000509748 SENP3Q9H4L4 574 aaPredicted RBP32.06■■■□□ 2.72
LIN54-208ENST00000509748 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.05■■■□□ 2.72
LIN54-208ENST00000509748 PPP1R15AO75807 674 aaPredicted RBP32.04■■■□□ 2.72
LIN54-208ENST00000509748 HSPA1LP34931 641 aa32.04■■■□□ 2.72
LIN54-208ENST00000509748 BCANQ96GW7 911 aa32.04■■■□□ 2.72
LIN54-208ENST00000509748 NUTM2DQ5VT03 806 aaPredicted RBP32.03■■■□□ 2.72
LIN54-208ENST00000509748 NWD1Q149M9 1564 aa32.02■■■□□ 2.72
LIN54-208ENST00000509748 TMEM94Q12767 1356 aa32■■■□□ 2.71
LIN54-208ENST00000509748 TBX22Q9Y458 520 aa32■■■□□ 2.71
LIN54-208ENST00000509748 ADAMTS13Q76LX8 1427 aa31.99■■■□□ 2.71
LIN54-208ENST00000509748 CHD2O14647 1828 aaKnown RBP31.98■■■□□ 2.71
LIN54-208ENST00000509748 PROSER2Q86WR7 435 aaPredicted RBP31.97■■■□□ 2.71
LIN54-208ENST00000509748 TRIM52Q96A61 297 aa31.97■■■□□ 2.71
LIN54-208ENST00000509748 DISP3Q9P2K9 1392 aa31.96■■■□□ 2.71
LIN54-208ENST00000509748 NKTRP30414 1462 aaKnown RBP31.96■■■□□ 2.71
LIN54-208ENST00000509748 TRPM2O94759 1503 aa31.95■■■□□ 2.71
LIN54-208ENST00000509748 RBM33Q96EV2 1170 aaKnown RBP31.95■■■□□ 2.71
LIN54-208ENST00000509748 CLTCL1P53675 1640 aa31.95■■■□□ 2.71
LIN54-208ENST00000509748 SLC4A1APQ9BWU0 796 aaKnown RBP31.89■■■□□ 2.7
LIN54-208ENST00000509748 DIP2AQ14689 1571 aa31.89■■■□□ 2.7
LIN54-208ENST00000509748 PIK3R4Q99570 1358 aa31.85■■■□□ 2.69
LIN54-208ENST00000509748 ZNF326Q5BKZ1 582 aaKnown RBP31.85■■■□□ 2.69
LIN54-208ENST00000509748 NRXN3Q9Y4C0 1643 aa31.85■■■□□ 2.69
LIN54-208ENST00000509748 KIF1BO60333 1816 aa31.83■■■□□ 2.69
LIN54-208ENST00000509748 NEXMIFQ5QGS0 1516 aa31.83■■■□□ 2.69
LIN54-208ENST00000509748 SETBP1Q9Y6X0 1596 aa31.82■■■□□ 2.68
LIN54-208ENST00000509748 ILDR2Q71H61 639 aa31.82■■■□□ 2.68
LIN54-208ENST00000509748 FAM135BQ49AJ0 1406 aa31.82■■■□□ 2.68
LIN54-208ENST00000509748 PTPRUQ92729 1446 aa31.82■■■□□ 2.68
LIN54-208ENST00000509748 FOXD1Q16676 465 aa31.78■■■□□ 2.68
LIN54-208ENST00000509748 MSH6P52701 1360 aa31.77■■■□□ 2.68
LIN54-208ENST00000509748 NCOA3Q9Y6Q9 1424 aa31.76■■■□□ 2.68
LIN54-208ENST00000509748 AMOTL2Q9Y2J4 779 aa31.76■■■□□ 2.67
LIN54-208ENST00000509748 MPHOSPH9Q99550 1183 aa31.74■■■□□ 2.67
LIN54-208ENST00000509748 METP08581 1390 aa31.72■■■□□ 2.67
LIN54-208ENST00000509748 MED1Q15648 1581 aaPredicted RBP31.72■■■□□ 2.67
LIN54-208ENST00000509748 SETD5Q9C0A6 1442 aa31.71■■■□□ 2.67
LIN54-208ENST00000509748 XRN1Q8IZH2 1706 aaKnown RBP31.7■■■□□ 2.67
LIN54-208ENST00000509748 SLAIN2Q9P270 581 aa31.7■■■□□ 2.67
LIN54-208ENST00000509748 ROBO1Q9Y6N7 1651 aa31.7■■■□□ 2.66
LIN54-208ENST00000509748 RPGRIP1LQ68CZ1 1315 aa31.68■■■□□ 2.66
LIN54-208ENST00000509748 VGFO15240 615 aaPredicted RBP31.66■■■□□ 2.66
LIN54-208ENST00000509748 C19orf44Q9H6X5 657 aa31.65■■■□□ 2.66
LIN54-208ENST00000509748 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.65■■■□□ 2.66
LIN54-208ENST00000509748 PPLO60437 1756 aa31.63■■■□□ 2.65
LIN54-208ENST00000509748 C14orf37Q86TY3 774 aa31.62■■■□□ 2.65
LIN54-208ENST00000509748 ACIN1Q9UKV3 1341 aaKnown RBP31.62■■■□□ 2.65
LIN54-208ENST00000509748 SETD1AO15047 1707 aaKnown RBP31.61■■■□□ 2.65
LIN54-208ENST00000509748 CCDC144AA2RUR9 1427 aa31.6■■■□□ 2.65
LIN54-208ENST00000509748 SPATA31E1Q6ZUB1 1445 aa31.6■■■□□ 2.65
LIN54-208ENST00000509748 RAB3GAP2Q9H2M9 1393 aa31.58■■■□□ 2.65
LIN54-208ENST00000509748 CADPS2Q86UW7 1296 aa31.58■■■□□ 2.65
LIN54-208ENST00000509748 ATF3P18847 181 aa31.55■■■□□ 2.64
LIN54-208ENST00000509748 RGL3Q3MIN7 710 aa31.52■■■□□ 2.64
LIN54-208ENST00000509748 ADGRF5Q8IZF2 1346 aa31.51■■■□□ 2.64
LIN54-208ENST00000509748 DCCP43146 1447 aa31.51■■■□□ 2.64
LIN54-208ENST00000509748 PHLPP1O60346 1717 aa31.49■■■□□ 2.63
LIN54-208ENST00000509748 SOCS7O14512 581 aa31.49■■■□□ 2.63
LIN54-208ENST00000509748 IFT172Q9UG01 1749 aa31.49■■■□□ 2.63
LIN54-208ENST00000509748 PRAG1Q86YV5 1406 aa31.48■■■□□ 2.63
LIN54-208ENST00000509748 ADGRL3Q9HAR2 1447 aa31.47■■■□□ 2.63
LIN54-208ENST00000509748 ROBO2Q9HCK4 1378 aa31.46■■■□□ 2.63
LIN54-208ENST00000509748 PTCH1Q13635 1447 aa31.46■■■□□ 2.63
LIN54-208ENST00000509748 ANKRD30BQ9BXX2 1392 aa31.45■■■□□ 2.63
LIN54-208ENST00000509748 COL16A1Q07092 1604 aaPredicted RBP31.45■■■□□ 2.62
LIN54-208ENST00000509748 MST1RQ04912 1400 aa31.44■■■□□ 2.62
LIN54-208ENST00000509748 BRINP3Q76B58 766 aa31.44■■■□□ 2.62
LIN54-208ENST00000509748 NALCNQ8IZF0 1738 aa31.44■■■□□ 2.62
LIN54-208ENST00000509748 PHF23Q9BUL5 403 aaPredicted RBP31.43■■■□□ 2.62
LIN54-208ENST00000509748 AHDC1Q5TGY3 1603 aaPredicted RBP31.42■■■□□ 2.62
LIN54-208ENST00000509748 HRCP23327 699 aa31.41■■■□□ 2.62
LIN54-208ENST00000509748 RGS17Q9UGC6 210 aaPredicted RBP31.4■■■□□ 2.62
LIN54-208ENST00000509748 JCADQ9P266 1359 aa31.39■■■□□ 2.62
LIN54-208ENST00000509748 PIK3C2GO75747 1445 aa31.37■■■□□ 2.61
LIN54-208ENST00000509748 ASXL1Q8IXJ9 1541 aa31.35■■■□□ 2.61
LIN54-208ENST00000509748 NRXN1Q9ULB1 1477 aa31.32■■■□□ 2.6
LIN54-208ENST00000509748 TECPR2O15040 1411 aa31.31■■■□□ 2.6
LIN54-208ENST00000509748 LRPPRCP42704 1394 aaKnown RBP31.3■■■□□ 2.6
LIN54-208ENST00000509748 TMEM132EQ6IEE7 984 aa31.3■■■□□ 2.6
LIN54-208ENST00000509748 C1orf167Q5SNV9 1468 aa31.29■■■□□ 2.6
LIN54-208ENST00000509748 NHSL1Q5SYE7 1610 aa31.28■■■□□ 2.6
LIN54-208ENST00000509748 C14orf93Q9H972 538 aaKnown RBP31.28■■■□□ 2.6
LIN54-208ENST00000509748 ABCC11Q96J66 1382 aa31.28■■■□□ 2.6
LIN54-208ENST00000509748 MYOM2P54296 1465 aa31.27■■■□□ 2.6
LIN54-208ENST00000509748 STK26Q9P289 416 aa31.27■■■□□ 2.6
LIN54-208ENST00000509748 SHPRHQ149N8 1683 aa31.25■■■□□ 2.59
LIN54-208ENST00000509748 WAPLQ7Z5K2 1190 aa31.24■■■□□ 2.59
LIN54-208ENST00000509748 DDX17Q92841 729 aaKnown RBP31.24■■■□□ 2.59
LIN54-208ENST00000509748 SPATA31A6Q5VVP1 1343 aa31.24■■■□□ 2.59
LIN54-208ENST00000509748 KNDC1Q76NI1 1749 aa31.23■■■□□ 2.59
LIN54-208ENST00000509748 LRP6O75581 1613 aa31.23■■■□□ 2.59
LIN54-208ENST00000509748 YTHDC2Q9H6S0 1430 aaKnown RBP31.23■■■□□ 2.59
LIN54-208ENST00000509748 CFAP70Q5T0N1 1121 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms