RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 NKX2-3Q8TAU0 364 aa9.65□□□□□ -0.86
SEC31A-229ENST00000509691 HIC1Q14526 733 aa9.64□□□□□ -0.87
SEC31A-229ENST00000509691 PCDHB3Q9Y5E6 796 aa9.64□□□□□ -0.87
SEC31A-229ENST00000509691 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
SEC31A-229ENST00000509691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.62□□□□□ -0.87
SEC31A-229ENST00000509691 ZPR1O75312 459 aa9.62□□□□□ -0.87
SEC31A-229ENST00000509691 OATP04181 439 aa9.62□□□□□ -0.87
SEC31A-229ENST00000509691 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
SEC31A-229ENST00000509691 PXYLP1Q8TE99 480 aa9.61□□□□□ -0.87
SEC31A-229ENST00000509691 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
SEC31A-229ENST00000509691 GGCXP38435 758 aa9.6□□□□□ -0.87
SEC31A-229ENST00000509691 BLOC1S3Q6QNY0 202 aa9.6□□□□□ -0.87
SEC31A-229ENST00000509691 GNPATO15228 680 aa9.59□□□□□ -0.87
SEC31A-229ENST00000509691 CFHP08603 1231 aa9.59□□□□□ -0.87
SEC31A-229ENST00000509691 KDM2AQ9Y2K7 1162 aa9.59□□□□□ -0.87
SEC31A-229ENST00000509691 ACTN4O43707 911 aaKnown RBP9.58□□□□□ -0.88
SEC31A-229ENST00000509691 FECHP22830 423 aa9.58□□□□□ -0.88
SEC31A-229ENST00000509691 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
SEC31A-229ENST00000509691 SLC10A3P09131 477 aa9.57□□□□□ -0.88
SEC31A-229ENST00000509691 Q6ZNB5 142 aa9.57□□□□□ -0.88
SEC31A-229ENST00000509691 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
SEC31A-229ENST00000509691 GPR37O15354 613 aa9.56□□□□□ -0.88
SEC31A-229ENST00000509691 LAPTM4AQ15012 233 aa9.55□□□□□ -0.88
SEC31A-229ENST00000509691 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
SEC31A-229ENST00000509691 GFRA3O60609 400 aa9.54□□□□□ -0.88
SEC31A-229ENST00000509691 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
SEC31A-229ENST00000509691 TLL1O43897 1013 aa9.53□□□□□ -0.88
SEC31A-229ENST00000509691 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
SEC31A-229ENST00000509691 NR1I2O75469 434 aa9.51□□□□□ -0.89
SEC31A-229ENST00000509691 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
SEC31A-229ENST00000509691 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
SEC31A-229ENST00000509691 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
SEC31A-229ENST00000509691 RDH13Q8NBN7 331 aa9.49□□□□□ -0.89
SEC31A-229ENST00000509691 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
SEC31A-229ENST00000509691 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
SEC31A-229ENST00000509691 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
SEC31A-229ENST00000509691 S1PR4O95977 384 aa9.47□□□□□ -0.89
SEC31A-229ENST00000509691 ADH1BP00325 375 aa9.47□□□□□ -0.89
SEC31A-229ENST00000509691 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
SEC31A-229ENST00000509691 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
SEC31A-229ENST00000509691 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.9
SEC31A-229ENST00000509691 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
SEC31A-229ENST00000509691 SLC19A1P41440 591 aa9.45□□□□□ -0.9
SEC31A-229ENST00000509691 ANKLE1Q8NAG6 615 aa9.45□□□□□ -0.9
SEC31A-229ENST00000509691 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
SEC31A-229ENST00000509691 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
SEC31A-229ENST00000509691 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
SEC31A-229ENST00000509691 SLC6A16Q9GZN6 736 aa9.44□□□□□ -0.9
SEC31A-229ENST00000509691 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
SEC31A-229ENST00000509691 FUT2Q10981 343 aa9.42□□□□□ -0.9
SEC31A-229ENST00000509691 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
SEC31A-229ENST00000509691 SPSB2Q99619 263 aa9.42□□□□□ -0.9
SEC31A-229ENST00000509691 LCE2BO14633 110 aa9.4□□□□□ -0.9
SEC31A-229ENST00000509691 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
SEC31A-229ENST00000509691 GCGRP47871 477 aa9.4□□□□□ -0.9
SEC31A-229ENST00000509691 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
SEC31A-229ENST00000509691 MORN1Q5T089 497 aa9.4□□□□□ -0.9
SEC31A-229ENST00000509691 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
SEC31A-229ENST00000509691 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
SEC31A-229ENST00000509691 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
SEC31A-229ENST00000509691 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
SEC31A-229ENST00000509691 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
SEC31A-229ENST00000509691 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
SEC31A-229ENST00000509691 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
SEC31A-229ENST00000509691 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
SEC31A-229ENST00000509691 IRF6O14896 467 aa9.35□□□□□ -0.91
SEC31A-229ENST00000509691 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
SEC31A-229ENST00000509691 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
SEC31A-229ENST00000509691 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
SEC31A-229ENST00000509691 CD46P15529 392 aa9.33□□□□□ -0.92
SEC31A-229ENST00000509691 PRR20EP86478 221 aa9.32□□□□□ -0.92
SEC31A-229ENST00000509691 PRR20CP86479 221 aa9.32□□□□□ -0.92
SEC31A-229ENST00000509691 PRR20DP86480 221 aa9.32□□□□□ -0.92
SEC31A-229ENST00000509691 PRR20BP86481 221 aa9.32□□□□□ -0.92
SEC31A-229ENST00000509691 PRR20AP86496 221 aa9.32□□□□□ -0.92
SEC31A-229ENST00000509691 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
SEC31A-229ENST00000509691 SALL2Q9Y467 1007 aaPredicted RBP9.32□□□□□ -0.92
SEC31A-229ENST00000509691 FAM160A2Q8N612 972 aaPredicted RBP9.31□□□□□ -0.92
SEC31A-229ENST00000509691 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
SEC31A-229ENST00000509691 FCF1Q9Y324 198 aaKnown RBP9.31□□□□□ -0.92
SEC31A-229ENST00000509691 TNFRSF10AO00220 468 aa9.3□□□□□ -0.92
SEC31A-229ENST00000509691 BRICD5Q6PL45 260 aa9.3□□□□□ -0.92
SEC31A-229ENST00000509691 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
SEC31A-229ENST00000509691 GDF9O60383 454 aa9.29□□□□□ -0.92
SEC31A-229ENST00000509691 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
SEC31A-229ENST00000509691 PRDM9Q9NQV7 894 aa9.29□□□□□ -0.92
SEC31A-229ENST00000509691 KDM4AO75164 1064 aa9.28□□□□□ -0.92
SEC31A-229ENST00000509691 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.28□□□□□ -0.92
SEC31A-229ENST00000509691 DGAT1O75907 488 aa9.27□□□□□ -0.93
SEC31A-229ENST00000509691 RPIAP49247 311 aa9.27□□□□□ -0.93
SEC31A-229ENST00000509691 Q3C1V9 767 aa9.27□□□□□ -0.93
SEC31A-229ENST00000509691 MSS51Q4VC12 460 aa9.27□□□□□ -0.93
SEC31A-229ENST00000509691 FAM187AA6NFU0 413 aa9.25□□□□□ -0.93
SEC31A-229ENST00000509691 CD2BP2O95400 341 aaKnown RBP9.25□□□□□ -0.93
SEC31A-229ENST00000509691 CLCN1P35523 988 aa9.25□□□□□ -0.93
SEC31A-229ENST00000509691 USP46P62068 366 aa9.25□□□□□ -0.93
SEC31A-229ENST00000509691 FOXC1Q12948 553 aa9.25□□□□□ -0.93
SEC31A-229ENST00000509691 GPCPD1Q9NPB8 672 aa9.25□□□□□ -0.93
SEC31A-229ENST00000509691 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
SEC31A-229ENST00000509691 LMOD2Q6P5Q4 547 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms