RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
CALCOCO2-214ENST00000509415 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
CALCOCO2-214ENST00000509415 KCNA6P17658 529 aa16.33■□□□□ 0.2
CALCOCO2-214ENST00000509415 ZFYVE9O95405 1425 aa16.33■□□□□ 0.2
CALCOCO2-214ENST00000509415 NKTRP30414 1462 aaKnown RBP16.32■□□□□ 0.2
CALCOCO2-214ENST00000509415 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
CALCOCO2-214ENST00000509415 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
CALCOCO2-214ENST00000509415 RIMS2Q9UQ26 1411 aa16.3■□□□□ 0.2
CALCOCO2-214ENST00000509415 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
CALCOCO2-214ENST00000509415 PLEKHG1Q9ULL1 1385 aa16.29■□□□□ 0.2
CALCOCO2-214ENST00000509415 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
CALCOCO2-214ENST00000509415 SPHKAPQ2M3C7 1700 aa16.28■□□□□ 0.2
CALCOCO2-214ENST00000509415 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
CALCOCO2-214ENST00000509415 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
CALCOCO2-214ENST00000509415 BCANQ96GW7 911 aa16.28■□□□□ 0.2
CALCOCO2-214ENST00000509415 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
CALCOCO2-214ENST00000509415 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
CALCOCO2-214ENST00000509415 NUP155O75694 1391 aa16.26■□□□□ 0.19
CALCOCO2-214ENST00000509415 ITGAEP38570 1179 aa16.25■□□□□ 0.19
CALCOCO2-214ENST00000509415 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
CALCOCO2-214ENST00000509415 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.24■□□□□ 0.19
CALCOCO2-214ENST00000509415 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
CALCOCO2-214ENST00000509415 RBM33Q96EV2 1170 aaKnown RBP16.23■□□□□ 0.19
CALCOCO2-214ENST00000509415 MSH6P52701 1360 aa16.23■□□□□ 0.19
CALCOCO2-214ENST00000509415 PHLPP1O60346 1717 aa16.22■□□□□ 0.19
CALCOCO2-214ENST00000509415 TBX22Q9Y458 520 aa16.22■□□□□ 0.19
CALCOCO2-214ENST00000509415 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
CALCOCO2-214ENST00000509415 TRPM2O94759 1503 aa16.19■□□□□ 0.18
CALCOCO2-214ENST00000509415 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
CALCOCO2-214ENST00000509415 KIF1BO60333 1816 aa16.19■□□□□ 0.18
CALCOCO2-214ENST00000509415 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
CALCOCO2-214ENST00000509415 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
CALCOCO2-214ENST00000509415 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
CALCOCO2-214ENST00000509415 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
CALCOCO2-214ENST00000509415 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
CALCOCO2-214ENST00000509415 SLAIN2Q9P270 581 aa16.16■□□□□ 0.18
CALCOCO2-214ENST00000509415 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
CALCOCO2-214ENST00000509415 SETBP1Q9Y6X0 1596 aa16.15■□□□□ 0.18
CALCOCO2-214ENST00000509415 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
CALCOCO2-214ENST00000509415 COL16A1Q07092 1604 aaPredicted RBP16.14■□□□□ 0.17
CALCOCO2-214ENST00000509415 RGS17Q9UGC6 210 aaPredicted RBP16.13■□□□□ 0.17
CALCOCO2-214ENST00000509415 NAIPQ13075 1403 aa16.12■□□□□ 0.17
CALCOCO2-214ENST00000509415 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
CALCOCO2-214ENST00000509415 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
CALCOCO2-214ENST00000509415 NEXMIFQ5QGS0 1516 aa16.1■□□□□ 0.17
CALCOCO2-214ENST00000509415 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-214ENST00000509415 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
CALCOCO2-214ENST00000509415 C19orf44Q9H6X5 657 aa16.1■□□□□ 0.17
CALCOCO2-214ENST00000509415 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
CALCOCO2-214ENST00000509415 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
CALCOCO2-214ENST00000509415 JCADQ9P266 1359 aa16.09■□□□□ 0.17
CALCOCO2-214ENST00000509415 SHPRHQ149N8 1683 aa16.08■□□□□ 0.17
CALCOCO2-214ENST00000509415 ATF3P18847 181 aa16.08■□□□□ 0.16
CALCOCO2-214ENST00000509415 DCCP43146 1447 aa16.07■□□□□ 0.16
CALCOCO2-214ENST00000509415 SETD1AO15047 1707 aaKnown RBP16.06■□□□□ 0.16
CALCOCO2-214ENST00000509415 HFM1A2PYH4 1435 aa16.06■□□□□ 0.16
CALCOCO2-214ENST00000509415 PPLO60437 1756 aa16.05■□□□□ 0.16
CALCOCO2-214ENST00000509415 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
CALCOCO2-214ENST00000509415 NHSL1Q5SYE7 1610 aa16.05■□□□□ 0.16
CALCOCO2-214ENST00000509415 METP08581 1390 aa16.04■□□□□ 0.16
CALCOCO2-214ENST00000509415 POTEAQ6S8J7 498 aa16.03■□□□□ 0.16
CALCOCO2-214ENST00000509415 ASXL1Q8IXJ9 1541 aa16.01■□□□□ 0.15
CALCOCO2-214ENST00000509415 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
CALCOCO2-214ENST00000509415 LRP6O75581 1613 aa16.01■□□□□ 0.15
CALCOCO2-214ENST00000509415 SPATA31A6Q5VVP1 1343 aa16■□□□□ 0.15
CALCOCO2-214ENST00000509415 BRINP3Q76B58 766 aa16■□□□□ 0.15
CALCOCO2-214ENST00000509415 MST1RQ04912 1400 aa16■□□□□ 0.15
CALCOCO2-214ENST00000509415 ADGRL3Q9HAR2 1447 aa16■□□□□ 0.15
CALCOCO2-214ENST00000509415 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
CALCOCO2-214ENST00000509415 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO2-214ENST00000509415 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
CALCOCO2-214ENST00000509415 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
CALCOCO2-214ENST00000509415 PTCH1Q13635 1447 aa15.96■□□□□ 0.15
CALCOCO2-214ENST00000509415 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
CALCOCO2-214ENST00000509415 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
CALCOCO2-214ENST00000509415 LAMC1P11047 1609 aa15.94■□□□□ 0.14
CALCOCO2-214ENST00000509415 PRAG1Q86YV5 1406 aa15.94■□□□□ 0.14
CALCOCO2-214ENST00000509415 HRCP23327 699 aa15.92■□□□□ 0.14
CALCOCO2-214ENST00000509415 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
CALCOCO2-214ENST00000509415 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
CALCOCO2-214ENST00000509415 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
CALCOCO2-214ENST00000509415 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
CALCOCO2-214ENST00000509415 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
CALCOCO2-214ENST00000509415 FOXD1Q16676 465 aa15.89■□□□□ 0.13
CALCOCO2-214ENST00000509415 KNDC1Q76NI1 1749 aa15.88■□□□□ 0.13
CALCOCO2-214ENST00000509415 NUTM2BA6NNL0 878 aaPredicted RBP15.88■□□□□ 0.13
CALCOCO2-214ENST00000509415 NUTM2EB1AL46 878 aaPredicted RBP15.88■□□□□ 0.13
CALCOCO2-214ENST00000509415 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
CALCOCO2-214ENST00000509415 DDX17Q92841 729 aaKnown RBP15.87■□□□□ 0.13
CALCOCO2-214ENST00000509415 CDC42BPGQ6DT37 1551 aa15.87■□□□□ 0.13
CALCOCO2-214ENST00000509415 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
CALCOCO2-214ENST00000509415 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
CALCOCO2-214ENST00000509415 MPHOSPH9Q99550 1183 aa15.85■□□□□ 0.13
CALCOCO2-214ENST00000509415 AFF2P51816 1311 aa15.84■□□□□ 0.13
CALCOCO2-214ENST00000509415 ADGRF5Q8IZF2 1346 aa15.84■□□□□ 0.13
CALCOCO2-214ENST00000509415 ANKRD30BQ9BXX2 1392 aa15.84■□□□□ 0.13
CALCOCO2-214ENST00000509415 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.13
CALCOCO2-214ENST00000509415 RGL3Q3MIN7 710 aa15.83■□□□□ 0.12
CALCOCO2-214ENST00000509415 ORAI2Q96SN7 254 aa15.83■□□□□ 0.12
CALCOCO2-214ENST00000509415 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms