RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 CHGAP10645 457 aaKnown RBP35.17■■■■□ 3.22
CSNK1G3-204ENST00000508708 SLC4A1APQ9BWU0 796 aaKnown RBP35.13■■■■□ 3.21
CSNK1G3-204ENST00000508708 SLC26A8Q96RN1 970 aa35.12■■■■□ 3.21
CSNK1G3-204ENST00000508708 NWD1Q149M9 1564 aa35.11■■■■□ 3.21
CSNK1G3-204ENST00000508708 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.1■■■■□ 3.21
CSNK1G3-204ENST00000508708 SETD5Q9C0A6 1442 aa35.09■■■■□ 3.21
CSNK1G3-204ENST00000508708 HDGFP51858 240 aaKnown RBP35.09■■■■□ 3.21
CSNK1G3-204ENST00000508708 ALKQ9UM73 1620 aa35.08■■■■□ 3.21
CSNK1G3-204ENST00000508708 UBAP1LF5GYI3 381 aa35.08■■■■□ 3.21
CSNK1G3-204ENST00000508708 PPP1R15AO75807 674 aaPredicted RBP35.08■■■■□ 3.21
CSNK1G3-204ENST00000508708 ADAMTS13Q76LX8 1427 aa35.06■■■■□ 3.2
CSNK1G3-204ENST00000508708 XIRP1Q702N8 1843 aaKnown RBP35.05■■■■□ 3.2
CSNK1G3-204ENST00000508708 NUTM2DQ5VT03 806 aaPredicted RBP35.03■■■■□ 3.2
CSNK1G3-204ENST00000508708 KIF1BO60333 1816 aa35.03■■■■□ 3.2
CSNK1G3-204ENST00000508708 DIP2AQ14689 1571 aa35.03■■■■□ 3.2
CSNK1G3-204ENST00000508708 NEXMIFQ5QGS0 1516 aa35.02■■■■□ 3.2
CSNK1G3-204ENST00000508708 KCNA6P17658 529 aa35.02■■■■□ 3.2
CSNK1G3-204ENST00000508708 NKTRP30414 1462 aaKnown RBP35.02■■■■□ 3.2
CSNK1G3-204ENST00000508708 NRXN3Q9Y4C0 1643 aa35■■■■□ 3.19
CSNK1G3-204ENST00000508708 RAB3GAP2Q9H2M9 1393 aa35■■■■□ 3.19
CSNK1G3-204ENST00000508708 SENP3Q9H4L4 574 aaPredicted RBP34.99■■■■□ 3.19
CSNK1G3-204ENST00000508708 CHD2O14647 1828 aaKnown RBP34.98■■■■□ 3.19
CSNK1G3-204ENST00000508708 FOXD1Q16676 465 aa34.98■■■■□ 3.19
CSNK1G3-204ENST00000508708 BCANQ96GW7 911 aa34.98■■■■□ 3.19
CSNK1G3-204ENST00000508708 MPHOSPH9Q99550 1183 aa34.98■■■■□ 3.19
CSNK1G3-204ENST00000508708 SETBP1Q9Y6X0 1596 aa34.98■■■■□ 3.19
CSNK1G3-204ENST00000508708 TBX22Q9Y458 520 aa34.97■■■■□ 3.19
CSNK1G3-204ENST00000508708 ACIN1Q9UKV3 1341 aaKnown RBP34.96■■■■□ 3.19
CSNK1G3-204ENST00000508708 TOM1O60784 492 aa34.94■■■■□ 3.18
CSNK1G3-204ENST00000508708 TMEM94Q12767 1356 aa34.93■■■■□ 3.18
CSNK1G3-204ENST00000508708 ZNF326Q5BKZ1 582 aaKnown RBP34.93■■■■□ 3.18
CSNK1G3-204ENST00000508708 PIK3R4Q99570 1358 aa34.9■■■■□ 3.18
CSNK1G3-204ENST00000508708 CCDC144AA2RUR9 1427 aa34.87■■■■□ 3.17
CSNK1G3-204ENST00000508708 PTPRUQ92729 1446 aa34.84■■■■□ 3.17
CSNK1G3-204ENST00000508708 PIP4K2BP78356 416 aa34.84■■■■□ 3.17
CSNK1G3-204ENST00000508708 SPATA31E1Q6ZUB1 1445 aa34.83■■■■□ 3.17
CSNK1G3-204ENST00000508708 PPLO60437 1756 aa34.82■■■■□ 3.17
CSNK1G3-204ENST00000508708 PROSER2Q86WR7 435 aaPredicted RBP34.82■■■■□ 3.16
CSNK1G3-204ENST00000508708 XRN1Q8IZH2 1706 aaKnown RBP34.81■■■■□ 3.16
CSNK1G3-204ENST00000508708 RBM33Q96EV2 1170 aaKnown RBP34.8■■■■□ 3.16
CSNK1G3-204ENST00000508708 RPGRIP1LQ68CZ1 1315 aa34.8■■■■□ 3.16
CSNK1G3-204ENST00000508708 SCAF1Q9H7N4 1312 aaKnown RBP34.79■■■■□ 3.16
CSNK1G3-204ENST00000508708 SETD1AO15047 1707 aaKnown RBP34.78■■■■□ 3.16
CSNK1G3-204ENST00000508708 METP08581 1390 aa34.76■■■■□ 3.16
CSNK1G3-204ENST00000508708 HRCP23327 699 aa34.75■■■■□ 3.15
CSNK1G3-204ENST00000508708 IFT172Q9UG01 1749 aa34.74■■■■□ 3.15
CSNK1G3-204ENST00000508708 NCOA3Q9Y6Q9 1424 aa34.73■■■■□ 3.15
CSNK1G3-204ENST00000508708 VGFO15240 615 aaPredicted RBP34.72■■■■□ 3.15
CSNK1G3-204ENST00000508708 HSPA1LP34931 641 aa34.72■■■■□ 3.15
CSNK1G3-204ENST00000508708 AMOTL2Q9Y2J4 779 aa34.71■■■■□ 3.15
CSNK1G3-204ENST00000508708 MSH6P52701 1360 aa34.7■■■■□ 3.15
CSNK1G3-204ENST00000508708 ANKRD30BQ9BXX2 1392 aa34.65■■■■□ 3.14
CSNK1G3-204ENST00000508708 FAM135BQ49AJ0 1406 aa34.64■■■■□ 3.14
CSNK1G3-204ENST00000508708 RGL3Q3MIN7 710 aa34.62■■■■□ 3.13
CSNK1G3-204ENST00000508708 PRAG1Q86YV5 1406 aa34.62■■■■□ 3.13
CSNK1G3-204ENST00000508708 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.61■■■■□ 3.13
CSNK1G3-204ENST00000508708 ADGRF5Q8IZF2 1346 aa34.6■■■■□ 3.13
CSNK1G3-204ENST00000508708 ROBO1Q9Y6N7 1651 aa34.6■■■■□ 3.13
CSNK1G3-204ENST00000508708 PIK3C2GO75747 1445 aa34.57■■■■□ 3.13
CSNK1G3-204ENST00000508708 PTCH1Q13635 1447 aa34.57■■■■□ 3.13
CSNK1G3-204ENST00000508708 C19orf44Q9H6X5 657 aa34.54■■■■□ 3.12
CSNK1G3-204ENST00000508708 DCCP43146 1447 aa34.54■■■■□ 3.12
CSNK1G3-204ENST00000508708 MYOM2P54296 1465 aa34.53■■■■□ 3.12
CSNK1G3-204ENST00000508708 NRXN1Q9ULB1 1477 aa34.53■■■■□ 3.12
CSNK1G3-204ENST00000508708 ASXL1Q8IXJ9 1541 aa34.53■■■■□ 3.12
CSNK1G3-204ENST00000508708 C14orf37Q86TY3 774 aa34.51■■■■□ 3.12
CSNK1G3-204ENST00000508708 NALCNQ8IZF0 1738 aa34.5■■■■□ 3.11
CSNK1G3-204ENST00000508708 ADGRL3Q9HAR2 1447 aa34.5■■■■□ 3.11
CSNK1G3-204ENST00000508708 SLAIN2Q9P270 581 aa34.5■■■■□ 3.11
CSNK1G3-204ENST00000508708 ROBO2Q9HCK4 1378 aa34.49■■■■□ 3.11
CSNK1G3-204ENST00000508708 CADPS2Q86UW7 1296 aa34.47■■■■□ 3.11
CSNK1G3-204ENST00000508708 DISP3Q9P2K9 1392 aa34.45■■■■□ 3.11
CSNK1G3-204ENST00000508708 MED1Q15648 1581 aaPredicted RBP34.44■■■■□ 3.1
CSNK1G3-204ENST00000508708 TECPR2O15040 1411 aa34.43■■■■□ 3.1
CSNK1G3-204ENST00000508708 ATF3P18847 181 aa34.42■■■■□ 3.1
CSNK1G3-204ENST00000508708 MST1RQ04912 1400 aa34.4■■■■□ 3.1
CSNK1G3-204ENST00000508708 KNDC1Q76NI1 1749 aa34.4■■■■□ 3.1
CSNK1G3-204ENST00000508708 LAMC1P11047 1609 aa34.39■■■■□ 3.1
CSNK1G3-204ENST00000508708 LRPPRCP42704 1394 aaKnown RBP34.38■■■■□ 3.09
CSNK1G3-204ENST00000508708 AHDC1Q5TGY3 1603 aaPredicted RBP34.35■■■■□ 3.09
CSNK1G3-204ENST00000508708 C14orf93Q9H972 538 aaKnown RBP34.35■■■■□ 3.09
CSNK1G3-204ENST00000508708 PHLPP1O60346 1717 aa34.35■■■■□ 3.09
CSNK1G3-204ENST00000508708 COL16A1Q07092 1604 aaPredicted RBP34.34■■■■□ 3.09
CSNK1G3-204ENST00000508708 ABCC11Q96J66 1382 aa34.34■■■■□ 3.09
CSNK1G3-204ENST00000508708 YTHDC2Q9H6S0 1430 aaKnown RBP34.32■■■■□ 3.08
CSNK1G3-204ENST00000508708 TMEM132EQ6IEE7 984 aa34.32■■■■□ 3.08
CSNK1G3-204ENST00000508708 DHX57Q6P158 1386 aaKnown RBP34.32■■■■□ 3.08
CSNK1G3-204ENST00000508708 BRINP3Q76B58 766 aa34.3■■■■□ 3.08
CSNK1G3-204ENST00000508708 CFAP70Q5T0N1 1121 aa34.28■■■■□ 3.08
CSNK1G3-204ENST00000508708 CDC42BPGQ6DT37 1551 aa34.28■■■■□ 3.08
CSNK1G3-204ENST00000508708 ADGRB1O14514 1584 aa34.27■■■■□ 3.08
CSNK1G3-204ENST00000508708 STK26Q9P289 416 aa34.26■■■■□ 3.08
CSNK1G3-204ENST00000508708 PLEKHH1Q9ULM0 1364 aa34.24■■■■□ 3.07
CSNK1G3-204ENST00000508708 NHSL1Q5SYE7 1610 aa34.24■■■■□ 3.07
CSNK1G3-204ENST00000508708 C1orf167Q5SNV9 1468 aa34.24■■■■□ 3.07
CSNK1G3-204ENST00000508708 DCAF11Q8TEB1 546 aa34.23■■■■□ 3.07
CSNK1G3-204ENST00000508708 STAC3Q96MF2 364 aa34.21■■■■□ 3.07
CSNK1G3-204ENST00000508708 WAPLQ7Z5K2 1190 aa34.2■■■■□ 3.07
CSNK1G3-204ENST00000508708 ILDR2Q71H61 639 aa34.18■■■■□ 3.06
CSNK1G3-204ENST00000508708 JCADQ9P266 1359 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms