RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 ROBO1Q9Y6N7 1651 aa12.28□□□□□ -0.44
HMGCR-206ENST00000508070 NCOA3Q9Y6Q9 1424 aa12.28□□□□□ -0.44
HMGCR-206ENST00000508070 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMGCR-206ENST00000508070 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
HMGCR-206ENST00000508070 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
HMGCR-206ENST00000508070 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
HMGCR-206ENST00000508070 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
HMGCR-206ENST00000508070 PLEKHG1Q9ULL1 1385 aa12.26□□□□□ -0.45
HMGCR-206ENST00000508070 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
HMGCR-206ENST00000508070 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
HMGCR-206ENST00000508070 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
HMGCR-206ENST00000508070 ADGRB3O60242 1522 aa12.25□□□□□ -0.45
HMGCR-206ENST00000508070 NWD1Q149M9 1564 aa12.25□□□□□ -0.45
HMGCR-206ENST00000508070 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
HMGCR-206ENST00000508070 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
HMGCR-206ENST00000508070 CROCC2H7BZ55 1655 aa12.23□□□□□ -0.45
HMGCR-206ENST00000508070 ZFYVE9O95405 1425 aa12.23□□□□□ -0.45
HMGCR-206ENST00000508070 RIMS2Q9UQ26 1411 aa12.23□□□□□ -0.45
HMGCR-206ENST00000508070 ATF3P18847 181 aa12.23□□□□□ -0.45
HMGCR-206ENST00000508070 MEX3CQ5U5Q3 659 aaKnown RBP12.23□□□□□ -0.45
HMGCR-206ENST00000508070 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
HMGCR-206ENST00000508070 PIK3R4Q99570 1358 aa12.21□□□□□ -0.45
HMGCR-206ENST00000508070 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
HMGCR-206ENST00000508070 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
HMGCR-206ENST00000508070 PHLPP1O60346 1717 aa12.2□□□□□ -0.46
HMGCR-206ENST00000508070 RXRBP28702 533 aa12.2□□□□□ -0.46
HMGCR-206ENST00000508070 CHD2O14647 1828 aaKnown RBP12.2□□□□□ -0.46
HMGCR-206ENST00000508070 ADGRL2O95490 1459 aa12.2□□□□□ -0.46
HMGCR-206ENST00000508070 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
HMGCR-206ENST00000508070 TRIM52Q96A61 297 aa12.19□□□□□ -0.46
HMGCR-206ENST00000508070 AMOTL2Q9Y2J4 779 aa12.18□□□□□ -0.46
HMGCR-206ENST00000508070 COL16A1Q07092 1604 aaPredicted RBP12.17□□□□□ -0.46
HMGCR-206ENST00000508070 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
HMGCR-206ENST00000508070 LRP6O75581 1613 aa12.16□□□□□ -0.46
HMGCR-206ENST00000508070 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
HMGCR-206ENST00000508070 BRINP3Q76B58 766 aa12.16□□□□□ -0.46
HMGCR-206ENST00000508070 TMEM131LA2VDJ0 1609 aa12.15□□□□□ -0.46
HMGCR-206ENST00000508070 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
HMGCR-206ENST00000508070 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
HMGCR-206ENST00000508070 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
HMGCR-206ENST00000508070 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.47
HMGCR-206ENST00000508070 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
HMGCR-206ENST00000508070 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
HMGCR-206ENST00000508070 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
HMGCR-206ENST00000508070 AFF2P51816 1311 aa12.12□□□□□ -0.47
HMGCR-206ENST00000508070 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
HMGCR-206ENST00000508070 DIP2AQ14689 1571 aa12.12□□□□□ -0.47
HMGCR-206ENST00000508070 DCCP43146 1447 aa12.11□□□□□ -0.47
HMGCR-206ENST00000508070 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
HMGCR-206ENST00000508070 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
HMGCR-206ENST00000508070 MYO5BQ9ULV0 1848 aa12.11□□□□□ -0.47
HMGCR-206ENST00000508070 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
HMGCR-206ENST00000508070 SETD5Q9C0A6 1442 aa12.11□□□□□ -0.47
HMGCR-206ENST00000508070 SHPRHQ149N8 1683 aa12.1□□□□□ -0.47
HMGCR-206ENST00000508070 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
HMGCR-206ENST00000508070 TRPM2O94759 1503 aa12.1□□□□□ -0.47
HMGCR-206ENST00000508070 NUP155O75694 1391 aa12.09□□□□□ -0.47
HMGCR-206ENST00000508070 ROCK1Q13464 1354 aa12.09□□□□□ -0.47
HMGCR-206ENST00000508070 UNC13BO14795 1591 aa12.07□□□□□ -0.48
HMGCR-206ENST00000508070 MST1RQ04912 1400 aa12.07□□□□□ -0.48
HMGCR-206ENST00000508070 C8orf37Q96NL8 207 aa12.07□□□□□ -0.48
HMGCR-206ENST00000508070 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
HMGCR-206ENST00000508070 NGLY1Q96IV0 654 aa12.06□□□□□ -0.48
HMGCR-206ENST00000508070 E9PCH4 1651 aa12.06□□□□□ -0.48
HMGCR-206ENST00000508070 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
HMGCR-206ENST00000508070 FOXD1Q16676 465 aa12.04□□□□□ -0.48
HMGCR-206ENST00000508070 METP08581 1390 aa12.04□□□□□ -0.48
HMGCR-206ENST00000508070 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
HMGCR-206ENST00000508070 DDX17Q92841 729 aaKnown RBP12.03□□□□□ -0.48
HMGCR-206ENST00000508070 IQGAP3Q86VI3 1631 aa12.03□□□□□ -0.48
HMGCR-206ENST00000508070 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
HMGCR-206ENST00000508070 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
HMGCR-206ENST00000508070 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
HMGCR-206ENST00000508070 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
HMGCR-206ENST00000508070 USP21Q9UK80 565 aa12.01□□□□□ -0.49
HMGCR-206ENST00000508070 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
HMGCR-206ENST00000508070 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
HMGCR-206ENST00000508070 RGS12O14924 1447 aa12.01□□□□□ -0.49
HMGCR-206ENST00000508070 XRN1Q8IZH2 1706 aaKnown RBP12□□□□□ -0.49
HMGCR-206ENST00000508070 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
HMGCR-206ENST00000508070 ITGAEP38570 1179 aa12□□□□□ -0.49
HMGCR-206ENST00000508070 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
HMGCR-206ENST00000508070 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
HMGCR-206ENST00000508070 C1orf167Q5SNV9 1468 aa11.99□□□□□ -0.49
HMGCR-206ENST00000508070 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
HMGCR-206ENST00000508070 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
HMGCR-206ENST00000508070 ORAI2Q96SN7 254 aa11.98□□□□□ -0.49
HMGCR-206ENST00000508070 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
HMGCR-206ENST00000508070 PTCH1Q13635 1447 aa11.97□□□□□ -0.49
HMGCR-206ENST00000508070 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
HMGCR-206ENST00000508070 ROBO2Q9HCK4 1378 aa11.94□□□□□ -0.5
HMGCR-206ENST00000508070 ATRNO75882 1429 aa11.94□□□□□ -0.5
HMGCR-206ENST00000508070 NPHP3Q7Z494 1330 aa11.93□□□□□ -0.5
HMGCR-206ENST00000508070 LAMC1P11047 1609 aa11.93□□□□□ -0.5
HMGCR-206ENST00000508070 NEXMIFQ5QGS0 1516 aa11.92□□□□□ -0.5
HMGCR-206ENST00000508070 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
HMGCR-206ENST00000508070 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
HMGCR-206ENST00000508070 HFM1A2PYH4 1435 aa11.92□□□□□ -0.5
HMGCR-206ENST00000508070 PRAG1Q86YV5 1406 aa11.92□□□□□ -0.5
HMGCR-206ENST00000508070 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms