RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNHG4-204ENST00000507197 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
SNHG4-204ENST00000507197 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
SNHG4-204ENST00000507197 PLEKHG1Q9ULL1 1385 aa19.65■□□□□ 0.74
SNHG4-204ENST00000507197 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
SNHG4-204ENST00000507197 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
SNHG4-204ENST00000507197 GCC2Q8IWJ2 1684 aa19.64■□□□□ 0.73
SNHG4-204ENST00000507197 RIMS2Q9UQ26 1411 aa19.63■□□□□ 0.73
SNHG4-204ENST00000507197 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
SNHG4-204ENST00000507197 NUP155O75694 1391 aa19.61■□□□□ 0.73
SNHG4-204ENST00000507197 ITGAEP38570 1179 aa19.61■□□□□ 0.73
SNHG4-204ENST00000507197 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
SNHG4-204ENST00000507197 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
SNHG4-204ENST00000507197 MSH6P52701 1360 aa19.6■□□□□ 0.73
SNHG4-204ENST00000507197 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
SNHG4-204ENST00000507197 IQGAP3Q86VI3 1631 aa19.59■□□□□ 0.73
SNHG4-204ENST00000507197 TBX22Q9Y458 520 aa19.59■□□□□ 0.73
SNHG4-204ENST00000507197 E9PCH4 1651 aa19.56■□□□□ 0.72
SNHG4-204ENST00000507197 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
SNHG4-204ENST00000507197 NCOA3Q9Y6Q9 1424 aa19.55■□□□□ 0.72
SNHG4-204ENST00000507197 PIK3R4Q99570 1358 aa19.54■□□□□ 0.72
SNHG4-204ENST00000507197 SLAIN2Q9P270 581 aa19.53■□□□□ 0.72
SNHG4-204ENST00000507197 DIP2AQ14689 1571 aa19.53■□□□□ 0.72
SNHG4-204ENST00000507197 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
SNHG4-204ENST00000507197 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
SNHG4-204ENST00000507197 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
SNHG4-204ENST00000507197 ROBO1Q9Y6N7 1651 aa19.51■□□□□ 0.71
SNHG4-204ENST00000507197 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
SNHG4-204ENST00000507197 CHD2O14647 1828 aaKnown RBP19.5■□□□□ 0.71
SNHG4-204ENST00000507197 ADAMTS13Q76LX8 1427 aa19.5■□□□□ 0.71
SNHG4-204ENST00000507197 CADPS2Q86UW7 1296 aa19.47■□□□□ 0.71
SNHG4-204ENST00000507197 C19orf44Q9H6X5 657 aa19.47■□□□□ 0.71
SNHG4-204ENST00000507197 TRPM2O94759 1503 aa19.46■□□□□ 0.71
SNHG4-204ENST00000507197 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
SNHG4-204ENST00000507197 ATF3P18847 181 aa19.45■□□□□ 0.7
SNHG4-204ENST00000507197 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
SNHG4-204ENST00000507197 AMOTL2Q9Y2J4 779 aa19.44■□□□□ 0.7
SNHG4-204ENST00000507197 JCADQ9P266 1359 aa19.44■□□□□ 0.7
SNHG4-204ENST00000507197 RGS17Q9UGC6 210 aaPredicted RBP19.43■□□□□ 0.7
SNHG4-204ENST00000507197 SPHKAPQ2M3C7 1700 aa19.41■□□□□ 0.7
SNHG4-204ENST00000507197 PHLPP1O60346 1717 aa19.39■□□□□ 0.7
SNHG4-204ENST00000507197 NAIPQ13075 1403 aa19.39■□□□□ 0.69
SNHG4-204ENST00000507197 SETBP1Q9Y6X0 1596 aa19.39■□□□□ 0.69
SNHG4-204ENST00000507197 DCCP43146 1447 aa19.38■□□□□ 0.69
SNHG4-204ENST00000507197 PTPRUQ92729 1446 aa19.37■□□□□ 0.69
SNHG4-204ENST00000507197 SPATA31A6Q5VVP1 1343 aa19.36■□□□□ 0.69
SNHG4-204ENST00000507197 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.35■□□□□ 0.69
SNHG4-204ENST00000507197 TRIM52Q96A61 297 aa19.35■□□□□ 0.69
SNHG4-204ENST00000507197 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
SNHG4-204ENST00000507197 COL16A1Q07092 1604 aaPredicted RBP19.33■□□□□ 0.69
SNHG4-204ENST00000507197 VGFO15240 615 aaPredicted RBP19.33■□□□□ 0.68
SNHG4-204ENST00000507197 POTEAQ6S8J7 498 aa19.33■□□□□ 0.68
SNHG4-204ENST00000507197 AHDC1Q5TGY3 1603 aaPredicted RBP19.33■□□□□ 0.68
SNHG4-204ENST00000507197 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
SNHG4-204ENST00000507197 NRXN3Q9Y4C0 1643 aa19.32■□□□□ 0.68
SNHG4-204ENST00000507197 METP08581 1390 aa19.32■□□□□ 0.68
SNHG4-204ENST00000507197 XRN1Q8IZH2 1706 aaKnown RBP19.31■□□□□ 0.68
SNHG4-204ENST00000507197 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
SNHG4-204ENST00000507197 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
SNHG4-204ENST00000507197 NEXMIFQ5QGS0 1516 aa19.3■□□□□ 0.68
SNHG4-204ENST00000507197 MEX3CQ5U5Q3 659 aaKnown RBP19.3■□□□□ 0.68
SNHG4-204ENST00000507197 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
SNHG4-204ENST00000507197 KIF1BO60333 1816 aa19.28■□□□□ 0.68
SNHG4-204ENST00000507197 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.68
SNHG4-204ENST00000507197 ZNF772Q68DY9 489 aaPredicted RBP19.27■□□□□ 0.68
SNHG4-204ENST00000507197 MST1RQ04912 1400 aa19.26■□□□□ 0.67
SNHG4-204ENST00000507197 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
SNHG4-204ENST00000507197 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
SNHG4-204ENST00000507197 LRRC59Q96AG4 307 aaKnown RBP19.24■□□□□ 0.67
SNHG4-204ENST00000507197 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
SNHG4-204ENST00000507197 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
SNHG4-204ENST00000507197 LRP6O75581 1613 aa19.22■□□□□ 0.67
SNHG4-204ENST00000507197 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
SNHG4-204ENST00000507197 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
SNHG4-204ENST00000507197 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
SNHG4-204ENST00000507197 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
SNHG4-204ENST00000507197 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
SNHG4-204ENST00000507197 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
SNHG4-204ENST00000507197 NHSL1Q5SYE7 1610 aa19.17■□□□□ 0.66
SNHG4-204ENST00000507197 ROBO2Q9HCK4 1378 aa19.17■□□□□ 0.66
SNHG4-204ENST00000507197 C1orf167Q5SNV9 1468 aa19.16■□□□□ 0.66
SNHG4-204ENST00000507197 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
SNHG4-204ENST00000507197 RXRBP28702 533 aa19.14■□□□□ 0.65
SNHG4-204ENST00000507197 FOXD1Q16676 465 aa19.13■□□□□ 0.65
SNHG4-204ENST00000507197 MPHOSPH9Q99550 1183 aa19.13■□□□□ 0.65
SNHG4-204ENST00000507197 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
SNHG4-204ENST00000507197 PPLO60437 1756 aa19.12■□□□□ 0.65
SNHG4-204ENST00000507197 SETD1AO15047 1707 aaKnown RBP19.12■□□□□ 0.65
SNHG4-204ENST00000507197 PNPLA6Q8IY17 1366 aa19.12■□□□□ 0.65
SNHG4-204ENST00000507197 AFF2P51816 1311 aa19.11■□□□□ 0.65
SNHG4-204ENST00000507197 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
SNHG4-204ENST00000507197 DDX17Q92841 729 aaKnown RBP19.11■□□□□ 0.65
SNHG4-204ENST00000507197 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
SNHG4-204ENST00000507197 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
SNHG4-204ENST00000507197 ORAI2Q96SN7 254 aa19.09■□□□□ 0.65
SNHG4-204ENST00000507197 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
SNHG4-204ENST00000507197 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.65
SNHG4-204ENST00000507197 ADGRF5Q8IZF2 1346 aa19.08■□□□□ 0.65
SNHG4-204ENST00000507197 LAMC1P11047 1609 aa19.07■□□□□ 0.64
SNHG4-204ENST00000507197 NPHP3Q7Z494 1330 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms