RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 GABPB1Q06547 395 aaPredicted RBP7.69□□□□□ -1.18
PDE4D-216ENST00000507116 CSPP1Q1MSJ5 1256 aa7.69□□□□□ -1.18
PDE4D-216ENST00000507116 HDAC1Q13547 482 aaPredicted RBP7.69□□□□□ -1.18
PDE4D-216ENST00000507116 ANKRD23Q86SG2 305 aa7.69□□□□□ -1.18
PDE4D-216ENST00000507116 CALR3Q96L12 384 aaKnown RBP7.69□□□□□ -1.18
PDE4D-216ENST00000507116 SASS6Q6UVJ0 657 aa7.68□□□□□ -1.18
PDE4D-216ENST00000507116 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
PDE4D-216ENST00000507116 SETDB1Q15047 1291 aa7.68□□□□□ -1.18
PDE4D-216ENST00000507116 ZNF428Q96B54 188 aa7.68□□□□□ -1.18
PDE4D-216ENST00000507116 PAIP2Q9BPZ3 127 aaKnown RBP7.68□□□□□ -1.18
PDE4D-216ENST00000507116 GRPEL1Q9HAV7 217 aa7.68□□□□□ -1.18
PDE4D-216ENST00000507116 WRNQ14191 1432 aaPredicted RBP eCLIP7.67□□□□□ -1.18
PDE4D-216ENST00000507116 FBLN2P98095 1184 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 CECR2Q9BXF3 1484 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 BECN1Q14457 450 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 BORCS6Q96GS4 357 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 FOXD4L6Q3SYB3 417 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-216ENST00000507116 FOXD4L3Q6VB84 417 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-216ENST00000507116 NBPF3Q9H094 633 aa7.67□□□□□ -1.18
PDE4D-216ENST00000507116 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
PDE4D-216ENST00000507116 POLD1P28340 1107 aa7.66□□□□□ -1.18
PDE4D-216ENST00000507116 ICE2Q659A1 982 aa7.66□□□□□ -1.18
PDE4D-216ENST00000507116 TSPAN18Q96SJ8 248 aa7.66□□□□□ -1.18
PDE4D-216ENST00000507116 FEZ2Q9UHY8 353 aaPredicted RBP7.66□□□□□ -1.18
PDE4D-216ENST00000507116 IPO8O15397 1037 aaKnown RBP7.66□□□□□ -1.18
PDE4D-216ENST00000507116 MED4Q9NPJ6 270 aa7.66□□□□□ -1.18
PDE4D-216ENST00000507116 NOP2P46087 812 aaKnown RBP7.65□□□□□ -1.18
PDE4D-216ENST00000507116 SLC4A3P48751 1232 aa7.65□□□□□ -1.18
PDE4D-216ENST00000507116 DDX10Q13206 875 aaKnown RBP7.65□□□□□ -1.18
PDE4D-216ENST00000507116 CCDC173Q0VFZ6 552 aa7.65□□□□□ -1.19
PDE4D-216ENST00000507116 ATP2B3Q16720 1220 aa7.65□□□□□ -1.19
PDE4D-216ENST00000507116 KIF3CO14782 793 aa7.64□□□□□ -1.19
PDE4D-216ENST00000507116 PPP1R12AO14974 1030 aaPredicted RBP7.64□□□□□ -1.19
PDE4D-216ENST00000507116 GUCY2CP25092 1073 aa7.64□□□□□ -1.19
PDE4D-216ENST00000507116 LRCH2Q5VUJ6 765 aa7.64□□□□□ -1.19
PDE4D-216ENST00000507116 MKL1Q969V6 931 aa7.64□□□□□ -1.19
PDE4D-216ENST00000507116 PEG3Q9GZU2 1588 aa7.64□□□□□ -1.19
PDE4D-216ENST00000507116 SPTY2D1Q68D10 685 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-216ENST00000507116 UPF2Q9HAU5 1272 aaKnown RBP7.63□□□□□ -1.19
PDE4D-216ENST00000507116 HS1BP3Q53T59 392 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 FEZ1Q99689 392 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 KLHL33A6NCF5 533 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 DHX16O60231 1041 aaKnown RBP7.63□□□□□ -1.19
PDE4D-216ENST00000507116 PPP1R15AO75807 674 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-216ENST00000507116 CT47B1P0C2W7 299 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-216ENST00000507116 LIG1P18858 919 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 MYBPC2Q14324 1141 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 RSPH14Q9UHP6 348 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 KNSTRNQ9Y448 316 aa7.63□□□□□ -1.19
PDE4D-216ENST00000507116 ZC3H12AQ5D1E8 599 aaKnown RBP7.62□□□□□ -1.19
PDE4D-216ENST00000507116 DNAJC14Q6Y2X3 702 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-216ENST00000507116 ARHGEF1Q92888 912 aaKnown RBP7.62□□□□□ -1.19
PDE4D-216ENST00000507116 MSL3Q8N5Y2 521 aaKnown RBP7.62□□□□□ -1.19
PDE4D-216ENST00000507116 CTAGE5O15320 804 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 BIRC2Q13490 618 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 JMYQ8N9B5 988 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 CCDC97Q96F63 343 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-216ENST00000507116 SUFUQ9UMX1 484 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 CCDC189A1A4V9 331 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 CREBRFQ8IUR6 639 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 PPP1R9BQ96SB3 815 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 BICRAQ9NZM4 1560 aa7.61□□□□□ -1.19
PDE4D-216ENST00000507116 RAD50Q92878 1312 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 IPO7O95373 1038 aaKnown RBP7.6□□□□□ -1.19
PDE4D-216ENST00000507116 MYRIPQ8NFW9 859 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 SIN3AQ96ST3 1273 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 RASSF4Q9H2L5 321 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
PDE4D-216ENST00000507116 RAD21O60216 631 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 SCP2P22307 547 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 PIK3R5Q8WYR1 880 aa7.6□□□□□ -1.19
PDE4D-216ENST00000507116 NOL10Q9BSC4 688 aaKnown RBP7.6□□□□□ -1.19
PDE4D-216ENST00000507116 COQ9O75208 318 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 DNAJC21Q5F1R6 531 aaKnown RBP7.59□□□□□ -1.19
PDE4D-216ENST00000507116 SWT1Q5T5J6 900 aaKnown RBP7.59□□□□□ -1.19
PDE4D-216ENST00000507116 CXorf56Q9H5V9 222 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 OGFRQ9NZT2 677 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 ANAPC4Q9UJX5 808 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 RNF123Q5XPI4 1314 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 TNNT1P13805 278 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 MCM5P33992 734 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 HMGN5P82970 282 aaKnown RBP7.59□□□□□ -1.19
PDE4D-216ENST00000507116 TRDNQ13061 729 aa7.59□□□□□ -1.19
PDE4D-216ENST00000507116 ZRSR2Q15696 482 aaKnown RBP7.59□□□□□ -1.19
PDE4D-216ENST00000507116 NUCKS1Q9H1E3 243 aaKnown RBP7.59□□□□□ -1.19
PDE4D-216ENST00000507116 SLFN14P0C7P3 912 aa7.59□□□□□ -1.2
PDE4D-216ENST00000507116 DDX46Q7L014 1031 aaKnown RBP7.59□□□□□ -1.2
PDE4D-216ENST00000507116 CCDC91Q7Z6B0 441 aa7.59□□□□□ -1.2
PDE4D-216ENST00000507116 SUDS3Q9H7L9 328 aaPredicted RBP7.59□□□□□ -1.2
PDE4D-216ENST00000507116 SPINK5Q9NQ38 1064 aaPredicted RBP7.59□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6CA6NDK9 693 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6BA6NDN3 693 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6DP0CG33 693 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 C11orf91Q3C1V1 193 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 PDCL2Q8N4E4 241 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 GOLGA6AQ9NYA3 693 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 NUB1Q9Y5A7 615 aa7.58□□□□□ -1.2
PDE4D-216ENST00000507116 SPDYE4A6NLX3 237 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms