RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TNRQ92752 1358 aa16.8■□□□□ 0.28
POLR2J3-211ENST00000506060 TMEM131LA2VDJ0 1609 aa16.8■□□□□ 0.28
POLR2J3-211ENST00000506060 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
POLR2J3-211ENST00000506060 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
POLR2J3-211ENST00000506060 HDGFP51858 240 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-211ENST00000506060 EIF3AQ14152 1382 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-211ENST00000506060 POLR1AO95602 1720 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-211ENST00000506060 NEXMIFQ5QGS0 1516 aa16.76■□□□□ 0.27
POLR2J3-211ENST00000506060 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
POLR2J3-211ENST00000506060 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
POLR2J3-211ENST00000506060 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
POLR2J3-211ENST00000506060 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-211ENST00000506060 NLRP1Q9C000 1473 aa16.75■□□□□ 0.27
POLR2J3-211ENST00000506060 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.27
POLR2J3-211ENST00000506060 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
POLR2J3-211ENST00000506060 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-211ENST00000506060 PIK3C2GO75747 1445 aa16.74■□□□□ 0.27
POLR2J3-211ENST00000506060 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-211ENST00000506060 CCDC7Q96M83 1385 aa16.74■□□□□ 0.27
POLR2J3-211ENST00000506060 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
POLR2J3-211ENST00000506060 C3P01024 1663 aa16.73■□□□□ 0.27
POLR2J3-211ENST00000506060 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
POLR2J3-211ENST00000506060 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
POLR2J3-211ENST00000506060 C14orf93Q9H972 538 aaKnown RBP16.72■□□□□ 0.27
POLR2J3-211ENST00000506060 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
POLR2J3-211ENST00000506060 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
POLR2J3-211ENST00000506060 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
POLR2J3-211ENST00000506060 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
POLR2J3-211ENST00000506060 TMF1P82094 1093 aa16.68■□□□□ 0.26
POLR2J3-211ENST00000506060 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
POLR2J3-211ENST00000506060 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
POLR2J3-211ENST00000506060 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
POLR2J3-211ENST00000506060 RIMS1Q86UR5 1692 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-211ENST00000506060 CEBPAP49715 358 aaPredicted RBP16.66■□□□□ 0.26
POLR2J3-211ENST00000506060 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
POLR2J3-211ENST00000506060 ANP32CO43423 234 aa16.64■□□□□ 0.25
POLR2J3-211ENST00000506060 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
POLR2J3-211ENST00000506060 MIER1Q8N108 512 aa16.64■□□□□ 0.25
POLR2J3-211ENST00000506060 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
POLR2J3-211ENST00000506060 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
POLR2J3-211ENST00000506060 EID1Q9Y6B2 187 aa16.63■□□□□ 0.25
POLR2J3-211ENST00000506060 SETD1BQ9UPS6 1966 aaKnown RBP16.63■□□□□ 0.25
POLR2J3-211ENST00000506060 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
POLR2J3-211ENST00000506060 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
POLR2J3-211ENST00000506060 ADGRB1O14514 1584 aa16.62■□□□□ 0.25
POLR2J3-211ENST00000506060 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
POLR2J3-211ENST00000506060 TESK2Q96S53 571 aa16.61■□□□□ 0.25
POLR2J3-211ENST00000506060 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
POLR2J3-211ENST00000506060 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-211ENST00000506060 SBNO2Q9Y2G9 1366 aa16.6■□□□□ 0.25
POLR2J3-211ENST00000506060 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
POLR2J3-211ENST00000506060 SLIT1O75093 1534 aa16.57■□□□□ 0.24
POLR2J3-211ENST00000506060 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
POLR2J3-211ENST00000506060 BCANQ96GW7 911 aa16.57■□□□□ 0.24
POLR2J3-211ENST00000506060 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
POLR2J3-211ENST00000506060 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
POLR2J3-211ENST00000506060 PLEKHG1Q9ULL1 1385 aa16.55■□□□□ 0.24
POLR2J3-211ENST00000506060 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
POLR2J3-211ENST00000506060 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
POLR2J3-211ENST00000506060 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
POLR2J3-211ENST00000506060 DISP3Q9P2K9 1392 aa16.54■□□□□ 0.24
POLR2J3-211ENST00000506060 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
POLR2J3-211ENST00000506060 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
POLR2J3-211ENST00000506060 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
POLR2J3-211ENST00000506060 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.24
POLR2J3-211ENST00000506060 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
POLR2J3-211ENST00000506060 ASXL1Q8IXJ9 1541 aa16.51■□□□□ 0.23
POLR2J3-211ENST00000506060 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
POLR2J3-211ENST00000506060 PTPRMP28827 1452 aa16.51■□□□□ 0.23
POLR2J3-211ENST00000506060 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-211ENST00000506060 POGKQ9P215 609 aa16.51■□□□□ 0.23
POLR2J3-211ENST00000506060 STK26Q9P289 416 aa16.51■□□□□ 0.23
POLR2J3-211ENST00000506060 EVC2Q86UK5 1308 aa16.5■□□□□ 0.23
POLR2J3-211ENST00000506060 ABCC11Q96J66 1382 aa16.5■□□□□ 0.23
POLR2J3-211ENST00000506060 NRXN3Q9Y4C0 1643 aa16.49■□□□□ 0.23
POLR2J3-211ENST00000506060 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-211ENST00000506060 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
POLR2J3-211ENST00000506060 LTKP29376 864 aa16.48■□□□□ 0.23
POLR2J3-211ENST00000506060 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
POLR2J3-211ENST00000506060 SIRT1Q96EB6 747 aa16.48■□□□□ 0.23
POLR2J3-211ENST00000506060 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-211ENST00000506060 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
POLR2J3-211ENST00000506060 KNDC1Q76NI1 1749 aa16.46■□□□□ 0.23
POLR2J3-211ENST00000506060 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
POLR2J3-211ENST00000506060 PRAM1Q96QH2 718 aa16.45■□□□□ 0.22
POLR2J3-211ENST00000506060 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
POLR2J3-211ENST00000506060 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
POLR2J3-211ENST00000506060 TECPR2O15040 1411 aa16.44■□□□□ 0.22
POLR2J3-211ENST00000506060 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
POLR2J3-211ENST00000506060 METP08581 1390 aa16.43■□□□□ 0.22
POLR2J3-211ENST00000506060 MED14O60244 1454 aa16.42■□□□□ 0.22
POLR2J3-211ENST00000506060 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
POLR2J3-211ENST00000506060 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
POLR2J3-211ENST00000506060 PANK3Q9H999 370 aa16.42■□□□□ 0.22
POLR2J3-211ENST00000506060 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
POLR2J3-211ENST00000506060 CPS1P31327 1500 aa16.41■□□□□ 0.22
POLR2J3-211ENST00000506060 RALBP1Q15311 655 aa16.41■□□□□ 0.22
POLR2J3-211ENST00000506060 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
POLR2J3-211ENST00000506060 SAFB2Q14151 953 aaKnown RBP eCLIP16.4■□□□□ 0.22
POLR2J3-211ENST00000506060 MYOM1P52179 1685 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms