RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
TCOF1-207ENST00000504761 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
TCOF1-207ENST00000504761 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
TCOF1-207ENST00000504761 CABP1Q9NZU7 370 aa18■□□□□ 0.47
TCOF1-207ENST00000504761 PLCH2O75038 1416 aa17.99■□□□□ 0.47
TCOF1-207ENST00000504761 OS9Q13438 667 aaPredicted RBP17.98■□□□□ 0.47
TCOF1-207ENST00000504761 ERICH6BQ5W0A0 696 aa17.98■□□□□ 0.47
TCOF1-207ENST00000504761 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
TCOF1-207ENST00000504761 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
TCOF1-207ENST00000504761 RPRD2Q5VT52 1461 aaKnown RBP17.98■□□□□ 0.47
TCOF1-207ENST00000504761 PSME1Q06323 249 aa17.98■□□□□ 0.47
TCOF1-207ENST00000504761 TRAPPC8Q9Y2L5 1435 aa17.97■□□□□ 0.47
TCOF1-207ENST00000504761 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
TCOF1-207ENST00000504761 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
TCOF1-207ENST00000504761 RIPK4P57078 832 aa17.96■□□□□ 0.47
TCOF1-207ENST00000504761 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
TCOF1-207ENST00000504761 E9PSI1 815 aa17.96■□□□□ 0.46
TCOF1-207ENST00000504761 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.46
TCOF1-207ENST00000504761 WAPLQ7Z5K2 1190 aa17.95■□□□□ 0.46
TCOF1-207ENST00000504761 SYCP2Q9BX26 1530 aa17.95■□□□□ 0.46
TCOF1-207ENST00000504761 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
TCOF1-207ENST00000504761 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
TCOF1-207ENST00000504761 DHX29Q7Z478 1369 aaKnown RBP17.94■□□□□ 0.46
TCOF1-207ENST00000504761 BRD4O60885 1362 aaPredicted RBP17.94■□□□□ 0.46
TCOF1-207ENST00000504761 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
TCOF1-207ENST00000504761 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
TCOF1-207ENST00000504761 BECN1Q14457 450 aa17.94■□□□□ 0.46
TCOF1-207ENST00000504761 CRBNQ96SW2 442 aa17.94■□□□□ 0.46
TCOF1-207ENST00000504761 NLRP6P59044 892 aa17.93■□□□□ 0.46
TCOF1-207ENST00000504761 DDRGK1Q96HY6 314 aa17.93■□□□□ 0.46
TCOF1-207ENST00000504761 TSHZ2Q9NRE2 1034 aa17.93■□□□□ 0.46
TCOF1-207ENST00000504761 DENND4BO75064 1496 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-207ENST00000504761 THEMISQ8N1K5 641 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-207ENST00000504761 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
TCOF1-207ENST00000504761 RUNDC1Q96C34 613 aa17.92■□□□□ 0.46
TCOF1-207ENST00000504761 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
TCOF1-207ENST00000504761 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
TCOF1-207ENST00000504761 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
TCOF1-207ENST00000504761 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
TCOF1-207ENST00000504761 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.45
TCOF1-207ENST00000504761 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
TCOF1-207ENST00000504761 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
TCOF1-207ENST00000504761 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
TCOF1-207ENST00000504761 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
TCOF1-207ENST00000504761 RBM33Q96EV2 1170 aaKnown RBP17.87■□□□□ 0.45
TCOF1-207ENST00000504761 TCOF1Q13428 1488 aaKnown RBP17.87■□□□□ 0.45
TCOF1-207ENST00000504761 CASC1Q6TDU7 716 aa17.87■□□□□ 0.45
TCOF1-207ENST00000504761 ESCO1Q5FWF5 840 aa17.86■□□□□ 0.45
TCOF1-207ENST00000504761 MAGI3Q5TCQ9 1506 aa17.86■□□□□ 0.45
TCOF1-207ENST00000504761 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
TCOF1-207ENST00000504761 PROSER2Q86WR7 435 aaPredicted RBP17.84■□□□□ 0.45
TCOF1-207ENST00000504761 NOS1P29475 1434 aa17.84■□□□□ 0.45
TCOF1-207ENST00000504761 NPHP1O15259 732 aa17.84■□□□□ 0.45
TCOF1-207ENST00000504761 SPRYD3Q8NCJ5 442 aa17.84■□□□□ 0.45
TCOF1-207ENST00000504761 KDM5BQ9UGL1 1544 aa17.83■□□□□ 0.45
TCOF1-207ENST00000504761 SAMD9Q5K651 1589 aa17.83■□□□□ 0.45
TCOF1-207ENST00000504761 ATF3P18847 181 aa17.83■□□□□ 0.45
TCOF1-207ENST00000504761 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
TCOF1-207ENST00000504761 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.44
TCOF1-207ENST00000504761 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
TCOF1-207ENST00000504761 RTEL1-TNFRSF6BF6WH68 1400 aa17.82■□□□□ 0.44
TCOF1-207ENST00000504761 TPRNQ4KMQ1 711 aa17.82■□□□□ 0.44
TCOF1-207ENST00000504761 TEFQ10587 303 aa17.82■□□□□ 0.44
TCOF1-207ENST00000504761 EIF2S2P20042 333 aaKnown RBP17.81■□□□□ 0.44
TCOF1-207ENST00000504761 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
TCOF1-207ENST00000504761 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
TCOF1-207ENST00000504761 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
TCOF1-207ENST00000504761 PANK1Q8TE04 598 aa17.8■□□□□ 0.44
TCOF1-207ENST00000504761 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
TCOF1-207ENST00000504761 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
TCOF1-207ENST00000504761 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
TCOF1-207ENST00000504761 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
TCOF1-207ENST00000504761 NSD3Q9BZ95 1437 aa17.78■□□□□ 0.44
TCOF1-207ENST00000504761 ITSN2Q9NZM3 1697 aa17.78■□□□□ 0.44
TCOF1-207ENST00000504761 CCDC61Q9Y6R9 512 aa17.78■□□□□ 0.44
TCOF1-207ENST00000504761 A2MP01023 1474 aa17.78■□□□□ 0.44
TCOF1-207ENST00000504761 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
TCOF1-207ENST00000504761 POGZQ7Z3K3 1410 aa17.77■□□□□ 0.44
TCOF1-207ENST00000504761 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
TCOF1-207ENST00000504761 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
TCOF1-207ENST00000504761 KCNJ4P48050 445 aa17.77■□□□□ 0.43
TCOF1-207ENST00000504761 EVA1CP58658 441 aa17.77■□□□□ 0.43
TCOF1-207ENST00000504761 TAOK2Q9UL54 1235 aa17.77■□□□□ 0.43
TCOF1-207ENST00000504761 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
TCOF1-207ENST00000504761 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
TCOF1-207ENST00000504761 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
TCOF1-207ENST00000504761 DUOX2Q9NRD8 1548 aa17.75■□□□□ 0.43
TCOF1-207ENST00000504761 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
TCOF1-207ENST00000504761 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
TCOF1-207ENST00000504761 ZNF518AQ6AHZ1 1483 aa17.74■□□□□ 0.43
TCOF1-207ENST00000504761 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
TCOF1-207ENST00000504761 BCAR3O75815 825 aa17.73■□□□□ 0.43
TCOF1-207ENST00000504761 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
TCOF1-207ENST00000504761 EXOSC9Q06265 439 aaKnown RBP17.73■□□□□ 0.43
TCOF1-207ENST00000504761 ATAD2Q6PL18 1390 aa17.73■□□□□ 0.43
TCOF1-207ENST00000504761 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
TCOF1-207ENST00000504761 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
TCOF1-207ENST00000504761 ANP32EQ9BTT0 268 aa17.72■□□□□ 0.43
TCOF1-207ENST00000504761 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
TCOF1-207ENST00000504761 PZPP20742 1482 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms