RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 IQGAP1P46940 1657 aa24.39■■□□□ 1.5
SCARB2-203ENST00000502908 PLCH2O75038 1416 aa24.39■■□□□ 1.49
SCARB2-203ENST00000502908 ZNF521Q96K83 1311 aa24.38■■□□□ 1.49
SCARB2-203ENST00000502908 RGS3P49796 1198 aa24.37■■□□□ 1.49
SCARB2-203ENST00000502908 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
SCARB2-203ENST00000502908 APAF1O14727 1248 aa24.37■■□□□ 1.49
SCARB2-203ENST00000502908 SCAF11Q99590 1463 aaKnown RBP24.35■■□□□ 1.49
SCARB2-203ENST00000502908 ABCC1P33527 1531 aa24.34■■□□□ 1.49
SCARB2-203ENST00000502908 ASXL1Q8IXJ9 1541 aa24.34■■□□□ 1.49
SCARB2-203ENST00000502908 CLTCL1P53675 1640 aa24.34■■□□□ 1.49
SCARB2-203ENST00000502908 BCAR3O75815 825 aa24.34■■□□□ 1.49
SCARB2-203ENST00000502908 SLFN5Q08AF3 891 aa24.34■■□□□ 1.49
SCARB2-203ENST00000502908 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
SCARB2-203ENST00000502908 CENPQQ7L2Z9 268 aaPredicted RBP24.33■■□□□ 1.49
SCARB2-203ENST00000502908 DMRT2Q9Y5R5 561 aa24.33■■□□□ 1.49
SCARB2-203ENST00000502908 SYNMO15061 1565 aa24.32■■□□□ 1.48
SCARB2-203ENST00000502908 CFAP70Q5T0N1 1121 aa24.32■■□□□ 1.48
SCARB2-203ENST00000502908 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
SCARB2-203ENST00000502908 MYOM1P52179 1685 aa24.32■■□□□ 1.48
SCARB2-203ENST00000502908 CDCA8Q53HL2 280 aa24.32■■□□□ 1.48
SCARB2-203ENST00000502908 ZCCHC11Q5TAX3 1644 aaKnown RBP24.31■■□□□ 1.48
SCARB2-203ENST00000502908 IL27Q8NEV9 243 aa24.3■■□□□ 1.48
SCARB2-203ENST00000502908 TRPM2O94759 1503 aa24.3■■□□□ 1.48
SCARB2-203ENST00000502908 C8orf34Q49A92 452 aa24.29■■□□□ 1.48
SCARB2-203ENST00000502908 CEP152O94986 1710 aa24.29■■□□□ 1.48
SCARB2-203ENST00000502908 DDRGK1Q96HY6 314 aa24.28■■□□□ 1.48
SCARB2-203ENST00000502908 UGGT1Q9NYU2 1555 aa24.28■■□□□ 1.48
SCARB2-203ENST00000502908 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.28■■□□□ 1.48
SCARB2-203ENST00000502908 KIF3BO15066 747 aa24.27■■□□□ 1.48
SCARB2-203ENST00000502908 RTN4Q9NQC3 1192 aaKnown RBP24.27■■□□□ 1.48
SCARB2-203ENST00000502908 PPM1GO15355 546 aaPredicted RBP24.27■■□□□ 1.48
SCARB2-203ENST00000502908 PIK3C2GO75747 1445 aa24.26■■□□□ 1.47
SCARB2-203ENST00000502908 CARD14Q9BXL6 1004 aa24.26■■□□□ 1.47
SCARB2-203ENST00000502908 ADGRF5Q8IZF2 1346 aa24.25■■□□□ 1.47
SCARB2-203ENST00000502908 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
SCARB2-203ENST00000502908 TNNT2P45379 298 aaPredicted RBP24.24■■□□□ 1.47
SCARB2-203ENST00000502908 ZFYVE16Q7Z3T8 1539 aa24.24■■□□□ 1.47
SCARB2-203ENST00000502908 SCAPERQ9BY12 1400 aa24.24■■□□□ 1.47
SCARB2-203ENST00000502908 PTPRTO14522 1441 aa24.23■■□□□ 1.47
SCARB2-203ENST00000502908 USP35Q9P2H5 1018 aa24.23■■□□□ 1.47
SCARB2-203ENST00000502908 EIF3AQ14152 1382 aaKnown RBP24.22■■□□□ 1.47
SCARB2-203ENST00000502908 KDM5AP29375 1690 aaKnown RBP24.22■■□□□ 1.47
SCARB2-203ENST00000502908 NEUROD2Q15784 382 aa24.22■■□□□ 1.47
SCARB2-203ENST00000502908 TRMT2AQ8IZ69 625 aaKnown RBP24.22■■□□□ 1.47
SCARB2-203ENST00000502908 DAXXQ9UER7 740 aaPredicted RBP24.22■■□□□ 1.47
SCARB2-203ENST00000502908 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
SCARB2-203ENST00000502908 NFKBIBQ15653 356 aa24.2■■□□□ 1.46
SCARB2-203ENST00000502908 ERVK-7P63135 1459 aa24.2■■□□□ 1.46
SCARB2-203ENST00000502908 IGHDP01880 384 aa24.19■■□□□ 1.46
SCARB2-203ENST00000502908 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
SCARB2-203ENST00000502908 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
SCARB2-203ENST00000502908 CHGAP10645 457 aaKnown RBP24.16■■□□□ 1.46
SCARB2-203ENST00000502908 PANK1Q8TE04 598 aa24.16■■□□□ 1.46
SCARB2-203ENST00000502908 KANK1Q14678 1352 aa24.16■■□□□ 1.46
SCARB2-203ENST00000502908 E9PSI1 815 aa24.16■■□□□ 1.46
SCARB2-203ENST00000502908 TET3O43151 1660 aa24.15■■□□□ 1.46
SCARB2-203ENST00000502908 COG6Q9Y2V7 657 aa24.15■■□□□ 1.46
SCARB2-203ENST00000502908 NPC1L1Q9UHC9 1359 aa24.15■■□□□ 1.46
SCARB2-203ENST00000502908 ABCA6Q8N139 1617 aa24.15■■□□□ 1.46
SCARB2-203ENST00000502908 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.46
SCARB2-203ENST00000502908 FRAT1Q92837 279 aaPredicted RBP24.14■■□□□ 1.45
SCARB2-203ENST00000502908 DEPDC5O75140 1603 aa24.13■■□□□ 1.45
SCARB2-203ENST00000502908 RTEL1-TNFRSF6BF6WH68 1400 aa24.13■■□□□ 1.45
SCARB2-203ENST00000502908 ATP7AQ04656 1500 aa24.12■■□□□ 1.45
SCARB2-203ENST00000502908 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
SCARB2-203ENST00000502908 WWC1Q8IX03 1113 aa24.11■■□□□ 1.45
SCARB2-203ENST00000502908 STAC3Q96MF2 364 aa24.1■■□□□ 1.45
SCARB2-203ENST00000502908 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
SCARB2-203ENST00000502908 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
SCARB2-203ENST00000502908 FANCAO15360 1455 aa24.09■■□□□ 1.45
SCARB2-203ENST00000502908 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
SCARB2-203ENST00000502908 SLC12A5Q9H2X9 1139 aa24.08■■□□□ 1.45
SCARB2-203ENST00000502908 TNNQ9UQP3 1299 aa24.08■■□□□ 1.45
SCARB2-203ENST00000502908 SEC24BO95487 1268 aa24.07■■□□□ 1.44
SCARB2-203ENST00000502908 GSE1Q14687 1217 aa24.07■■□□□ 1.44
SCARB2-203ENST00000502908 FRAT2O75474 233 aaPredicted RBP24.06■■□□□ 1.44
SCARB2-203ENST00000502908 TMEM132EQ6IEE7 984 aa24.06■■□□□ 1.44
SCARB2-203ENST00000502908 MORC1Q86VD1 984 aa24.06■■□□□ 1.44
SCARB2-203ENST00000502908 SENP3Q9H4L4 574 aaPredicted RBP24.06■■□□□ 1.44
SCARB2-203ENST00000502908 CFAP65Q6ZU64 1925 aaKnown RBP24.06■■□□□ 1.44
SCARB2-203ENST00000502908 MROH2AA6NES4 1674 aa24.06■■□□□ 1.44
SCARB2-203ENST00000502908 BRPF3Q9ULD4 1205 aa24.06■■□□□ 1.44
SCARB2-203ENST00000502908 NSD3Q9BZ95 1437 aa24.06■■□□□ 1.44
SCARB2-203ENST00000502908 KIAA1210Q9ULL0 1709 aa24.06■■□□□ 1.44
SCARB2-203ENST00000502908 UHRF1BP1LA0JNW5 1464 aa24.05■■□□□ 1.44
SCARB2-203ENST00000502908 CLUAP1Q96AJ1 413 aa24.04■■□□□ 1.44
SCARB2-203ENST00000502908 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
SCARB2-203ENST00000502908 NOS1P29475 1434 aa24.04■■□□□ 1.44
SCARB2-203ENST00000502908 INO80Q9ULG1 1556 aaPredicted RBP24.04■■□□□ 1.44
SCARB2-203ENST00000502908 KIF1BO60333 1816 aa24.03■■□□□ 1.44
SCARB2-203ENST00000502908 MROH1Q8NDA8 1641 aa24.03■■□□□ 1.44
SCARB2-203ENST00000502908 ADGRL1O94910 1474 aa24.03■■□□□ 1.44
SCARB2-203ENST00000502908 NUTM2DQ5VT03 806 aaPredicted RBP24.02■■□□□ 1.44
SCARB2-203ENST00000502908 TCP11L2Q8N4U5 519 aa24.01■■□□□ 1.43
SCARB2-203ENST00000502908 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
SCARB2-203ENST00000502908 MYOM2P54296 1465 aa24.01■■□□□ 1.43
SCARB2-203ENST00000502908 USP19O94966 1318 aa24■■□□□ 1.43
SCARB2-203ENST00000502908 RLBP1P12271 317 aa24■■□□□ 1.43
SCARB2-203ENST00000502908 POLR3AO14802 1390 aaPredicted RBP24■■□□□ 1.43
SCARB2-203ENST00000502908 PDE3AQ14432 1141 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms