RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
SFXN1-204ENST00000502865 PPLO60437 1756 aa13.89□□□□□ -0.19
SFXN1-204ENST00000502865 TNRQ92752 1358 aa13.89□□□□□ -0.19
SFXN1-204ENST00000502865 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
SFXN1-204ENST00000502865 TRPM1Q7Z4N2 1603 aa13.87□□□□□ -0.19
SFXN1-204ENST00000502865 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
SFXN1-204ENST00000502865 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
SFXN1-204ENST00000502865 NEXMIFQ5QGS0 1516 aa13.86□□□□□ -0.19
SFXN1-204ENST00000502865 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
SFXN1-204ENST00000502865 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
SFXN1-204ENST00000502865 RPGRIP1LQ68CZ1 1315 aa13.86□□□□□ -0.19
SFXN1-204ENST00000502865 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
SFXN1-204ENST00000502865 MYOM2P54296 1465 aa13.86□□□□□ -0.19
SFXN1-204ENST00000502865 STAC3Q96MF2 364 aa13.85□□□□□ -0.19
SFXN1-204ENST00000502865 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
SFXN1-204ENST00000502865 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
SFXN1-204ENST00000502865 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
SFXN1-204ENST00000502865 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.2
SFXN1-204ENST00000502865 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.2
SFXN1-204ENST00000502865 NLRP1Q9C000 1473 aa13.81□□□□□ -0.2
SFXN1-204ENST00000502865 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
SFXN1-204ENST00000502865 PTPRMP28827 1452 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 MYO3AQ8NEV4 1616 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
SFXN1-204ENST00000502865 CFAP70Q5T0N1 1121 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
SFXN1-204ENST00000502865 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 ZFYVE9O95405 1425 aa13.8□□□□□ -0.2
SFXN1-204ENST00000502865 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
SFXN1-204ENST00000502865 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
SFXN1-204ENST00000502865 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
SFXN1-204ENST00000502865 LAMC1P11047 1609 aa13.78□□□□□ -0.2
SFXN1-204ENST00000502865 USP47Q96K76 1375 aa13.77□□□□□ -0.21
SFXN1-204ENST00000502865 C14orf93Q9H972 538 aaKnown RBP13.77□□□□□ -0.21
SFXN1-204ENST00000502865 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
SFXN1-204ENST00000502865 SETD1BQ9UPS6 1966 aaKnown RBP13.75□□□□□ -0.21
SFXN1-204ENST00000502865 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
SFXN1-204ENST00000502865 IQGAP1P46940 1657 aa13.74□□□□□ -0.21
SFXN1-204ENST00000502865 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
SFXN1-204ENST00000502865 LTKP29376 864 aa13.73□□□□□ -0.21
SFXN1-204ENST00000502865 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
SFXN1-204ENST00000502865 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
SFXN1-204ENST00000502865 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
SFXN1-204ENST00000502865 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-204ENST00000502865 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
SFXN1-204ENST00000502865 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
SFXN1-204ENST00000502865 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
SFXN1-204ENST00000502865 SLIT1O75093 1534 aa13.72□□□□□ -0.21
SFXN1-204ENST00000502865 ALKQ9UM73 1620 aa13.72□□□□□ -0.21
SFXN1-204ENST00000502865 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
SFXN1-204ENST00000502865 ASXL1Q8IXJ9 1541 aa13.71□□□□□ -0.21
SFXN1-204ENST00000502865 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.21
SFXN1-204ENST00000502865 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
SFXN1-204ENST00000502865 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
SFXN1-204ENST00000502865 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
SFXN1-204ENST00000502865 TXNDC2Q86VQ3 553 aa13.7□□□□□ -0.22
SFXN1-204ENST00000502865 WASHC2AQ641Q2 1341 aa13.68□□□□□ -0.22
SFXN1-204ENST00000502865 DISP3Q9P2K9 1392 aa13.68□□□□□ -0.22
SFXN1-204ENST00000502865 TESK2Q96S53 571 aa13.67□□□□□ -0.22
SFXN1-204ENST00000502865 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
SFXN1-204ENST00000502865 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
SFXN1-204ENST00000502865 EID1Q9Y6B2 187 aa13.66□□□□□ -0.22
SFXN1-204ENST00000502865 POLR1AO95602 1720 aaPredicted RBP13.66□□□□□ -0.22
SFXN1-204ENST00000502865 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
SFXN1-204ENST00000502865 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
SFXN1-204ENST00000502865 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
SFXN1-204ENST00000502865 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
SFXN1-204ENST00000502865 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
SFXN1-204ENST00000502865 METP08581 1390 aa13.64□□□□□ -0.23
SFXN1-204ENST00000502865 BCANQ96GW7 911 aa13.64□□□□□ -0.23
SFXN1-204ENST00000502865 STK26Q9P289 416 aa13.64□□□□□ -0.23
SFXN1-204ENST00000502865 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
SFXN1-204ENST00000502865 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
SFXN1-204ENST00000502865 MED14O60244 1454 aa13.63□□□□□ -0.23
SFXN1-204ENST00000502865 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
SFXN1-204ENST00000502865 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
SFXN1-204ENST00000502865 ANKLE2Q86XL3 938 aa13.61□□□□□ -0.23
SFXN1-204ENST00000502865 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
SFXN1-204ENST00000502865 QRICH2Q9H0J4 1663 aa13.6□□□□□ -0.23
SFXN1-204ENST00000502865 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
SFXN1-204ENST00000502865 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
SFXN1-204ENST00000502865 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
SFXN1-204ENST00000502865 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
SFXN1-204ENST00000502865 ABCC11Q96J66 1382 aa13.58□□□□□ -0.23
SFXN1-204ENST00000502865 PTPRUQ92729 1446 aa13.58□□□□□ -0.24
SFXN1-204ENST00000502865 TMF1P82094 1093 aa13.58□□□□□ -0.24
SFXN1-204ENST00000502865 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
SFXN1-204ENST00000502865 DLC1Q96QB1 1528 aa13.57□□□□□ -0.24
SFXN1-204ENST00000502865 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
SFXN1-204ENST00000502865 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
SFXN1-204ENST00000502865 HSPA2P54652 639 aa13.56□□□□□ -0.24
SFXN1-204ENST00000502865 SAFB2Q14151 953 aaKnown RBP eCLIP13.56□□□□□ -0.24
SFXN1-204ENST00000502865 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
SFXN1-204ENST00000502865 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
SFXN1-204ENST00000502865 SBNO2Q9Y2G9 1366 aa13.56□□□□□ -0.24
SFXN1-204ENST00000502865 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
SFXN1-204ENST00000502865 TECPR2O15040 1411 aa13.55□□□□□ -0.24
SFXN1-204ENST00000502865 POGKQ9P215 609 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms