RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 NLRP7Q8WX94 980 aa6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 CDCA7LQ96GN5 454 aa6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 ADAM33Q9BZ11 813 aa6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 GZF1Q9H116 711 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 RB1CC1Q8TDY2 1594 aa6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 A6NJR5 290 aa6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 PTPREP23469 700 aa6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 CLK2P49760 499 aaKnown RBP6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 PHOX2BQ99453 314 aa6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 TMUB1Q9BVT8 246 aa6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 ZNF777Q9ULD5 760 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P21-201ENST00000502313 SNPHO15079 494 aa6.83□□□□□ -1.32
HMGB1P21-201ENST00000502313 ONECUT3O60422 494 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P21-201ENST00000502313 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
HMGB1P21-201ENST00000502313 MCM6Q14566 821 aa6.82□□□□□ -1.32
HMGB1P21-201ENST00000502313 PACS2Q86VP3 889 aa6.82□□□□□ -1.32
HMGB1P21-201ENST00000502313 WWC1Q8IX03 1113 aa6.82□□□□□ -1.32
HMGB1P21-201ENST00000502313 KHSRPQ92945 711 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB1P21-201ENST00000502313 SLC4A3P48751 1232 aa6.81□□□□□ -1.32
HMGB1P21-201ENST00000502313 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
HMGB1P21-201ENST00000502313 MYSM1Q5VVJ2 828 aa6.81□□□□□ -1.32
HMGB1P21-201ENST00000502313 TBC1D2Q9BYX2 928 aa6.81□□□□□ -1.32
HMGB1P21-201ENST00000502313 PRM3Q9NNZ6 103 aa6.81□□□□□ -1.32
HMGB1P21-201ENST00000502313 KDM4FA0A1W2PPD8 638 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 PPP1R3GB7ZBB8 358 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 ST18O60284 1047 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 DNAJB2P25686 324 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 BCL2L12Q9HB09 334 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 PLSCR2Q9NRY7 297 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 PNMA3Q9UL41 463 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 LHX6Q9UPM6 363 aa6.8□□□□□ -1.32
HMGB1P21-201ENST00000502313 RCCD1A6NED2 376 aa6.79□□□□□ -1.32
HMGB1P21-201ENST00000502313 DDX11L8A8MPP1 907 aa6.79□□□□□ -1.32
HMGB1P21-201ENST00000502313 RDH13Q8NBN7 331 aa6.79□□□□□ -1.32
HMGB1P21-201ENST00000502313 TTC13Q8NBP0 860 aa6.79□□□□□ -1.32
HMGB1P21-201ENST00000502313 PROCA1Q8NCQ7 364 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P21-201ENST00000502313 SPDYE5A6NIY4 337 aa6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 HOXB3P14651 431 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 CDK11BP21127 795 aaKnown RBP6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 NUDT18Q6ZVK8 323 aa6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 PROSER2Q86WR7 435 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 CCDC97Q96F63 343 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P21-201ENST00000502313 HMGB1P09429 215 aaKnown RBP6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 IRF5Q13568 498 aa6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 TMEM259Q4ZIN3 620 aa6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 GPR153Q6NV75 609 aa6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 RETREG2Q8NC44 543 aa6.77□□□□□ -1.33
HMGB1P21-201ENST00000502313 TRIM6-TRIM34B2RNG4 842 aa6.76□□□□□ -1.33
HMGB1P21-201ENST00000502313 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
HMGB1P21-201ENST00000502313 HDGFP51858 240 aaKnown RBP6.76□□□□□ -1.33
HMGB1P21-201ENST00000502313 BANK1Q8NDB2 785 aa6.76□□□□□ -1.33
HMGB1P21-201ENST00000502313 KCNK17Q96T54 332 aa6.76□□□□□ -1.33
HMGB1P21-201ENST00000502313 BICRAQ9NZM4 1560 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 NUTM2BA6NNL0 878 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 NUTM2EB1AL46 878 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 E9PSI1 815 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 COL9A1P20849 921 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 RFC5P40937 340 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 NUTM2DQ5VT03 806 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 NUTM2AQ8IVF1 878 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 SPIRE2Q8WWL2 714 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 TATDN2Q93075 761 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 SERPINA10Q9UK55 444 aa6.75□□□□□ -1.33
HMGB1P21-201ENST00000502313 CD46P15529 392 aa6.74□□□□□ -1.33
HMGB1P21-201ENST00000502313 EYA1Q99502 592 aa6.74□□□□□ -1.33
HMGB1P21-201ENST00000502313 TSKSQ9UJT2 592 aa6.74□□□□□ -1.33
HMGB1P21-201ENST00000502313 PUS7Q96PZ0 661 aaKnown RBP6.73□□□□□ -1.33
HMGB1P21-201ENST00000502313 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
HMGB1P21-201ENST00000502313 PCDH10Q9P2E7 1040 aa6.73□□□□□ -1.33
HMGB1P21-201ENST00000502313 RSBN1LQ6PCB5 846 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P21-201ENST00000502313 LIMD1Q9UGP4 676 aa6.72□□□□□ -1.33
HMGB1P21-201ENST00000502313 SPTLC1O15269 473 aa6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 KDM4AO75164 1064 aa6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 AP1G2O75843 785 aa6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 HOXB1P14653 301 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 USP46P62068 366 aa6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 FNBP4Q8N3X1 1017 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 POM121Q96HA1 1249 aa6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 FAM198AQ9UFP1 575 aa6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 ZNF330Q9Y3S2 320 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P21-201ENST00000502313 MOXD2PA6NHM9 499 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 SMAPO00193 183 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 PPP2R2DQ66LE6 453 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 CDAN1Q8IWY9 1227 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 UNC13AQ9UPW8 1703 aa6.7□□□□□ -1.34
HMGB1P21-201ENST00000502313 POTEB3A0JP26 581 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 RNF40O75150 1001 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 GJA5P36382 358 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 ABL2P42684 1182 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 PROX2Q3B8N5 592 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 GRIPAP1Q4V328 841 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 POTEBQ6S5H4 581 aa6.69□□□□□ -1.34
HMGB1P21-201ENST00000502313 ZBTB3Q9H5J0 574 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms