RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
CLDND1-206ENST00000502299 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
CLDND1-206ENST00000502299 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
CLDND1-206ENST00000502299 TET3O43151 1660 aa21.55■■□□□ 1.04
CLDND1-206ENST00000502299 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
CLDND1-206ENST00000502299 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
CLDND1-206ENST00000502299 KDM5AP29375 1690 aaKnown RBP21.53■■□□□ 1.04
CLDND1-206ENST00000502299 IQGAP3Q86VI3 1631 aa21.52■■□□□ 1.04
CLDND1-206ENST00000502299 SLC52A1Q9NWF4 448 aa21.51■■□□□ 1.03
CLDND1-206ENST00000502299 PROSER2Q86WR7 435 aaPredicted RBP21.5■■□□□ 1.03
CLDND1-206ENST00000502299 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
CLDND1-206ENST00000502299 ADGRB3O60242 1522 aa21.48■■□□□ 1.03
CLDND1-206ENST00000502299 E9PCH4 1651 aa21.44■■□□□ 1.02
CLDND1-206ENST00000502299 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
CLDND1-206ENST00000502299 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
CLDND1-206ENST00000502299 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
CLDND1-206ENST00000502299 ROBO1Q9Y6N7 1651 aa21.44■■□□□ 1.02
CLDND1-206ENST00000502299 POTEAQ6S8J7 498 aa21.43■■□□□ 1.02
CLDND1-206ENST00000502299 BCANQ96GW7 911 aa21.43■■□□□ 1.02
CLDND1-206ENST00000502299 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
CLDND1-206ENST00000502299 ZFYVE9O95405 1425 aa21.43■■□□□ 1.02
CLDND1-206ENST00000502299 PLEKHG1Q9ULL1 1385 aa21.4■■□□□ 1.02
CLDND1-206ENST00000502299 SLAIN2Q9P270 581 aa21.4■■□□□ 1.02
CLDND1-206ENST00000502299 MSH6P52701 1360 aa21.39■■□□□ 1.02
CLDND1-206ENST00000502299 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
CLDND1-206ENST00000502299 PPP1R15AO75807 674 aaPredicted RBP21.36■■□□□ 1.01
CLDND1-206ENST00000502299 MPHOSPH9Q99550 1183 aa21.36■■□□□ 1.01
CLDND1-206ENST00000502299 CHGAP10645 457 aaKnown RBP21.35■■□□□ 1.01
CLDND1-206ENST00000502299 HRCP23327 699 aa21.35■■□□□ 1.01
CLDND1-206ENST00000502299 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
CLDND1-206ENST00000502299 RAB3GAP2Q9H2M9 1393 aa21.35■■□□□ 1.01
CLDND1-206ENST00000502299 TMEM131LA2VDJ0 1609 aa21.34■■□□□ 1.01
CLDND1-206ENST00000502299 TBX22Q9Y458 520 aa21.34■■□□□ 1.01
CLDND1-206ENST00000502299 NUTM2DQ5VT03 806 aaPredicted RBP21.33■■□□□ 1.01
CLDND1-206ENST00000502299 ADAMTS13Q76LX8 1427 aa21.31■■□□□ 1
CLDND1-206ENST00000502299 CHD2O14647 1828 aaKnown RBP21.31■■□□□ 1
CLDND1-206ENST00000502299 MYO5BQ9ULV0 1848 aa21.31■■□□□ 1
CLDND1-206ENST00000502299 JCADQ9P266 1359 aa21.3■■□□□ 1
CLDND1-206ENST00000502299 SPHKAPQ2M3C7 1700 aa21.29■■□□□ 1
CLDND1-206ENST00000502299 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.29■■□□□ 1
CLDND1-206ENST00000502299 NCOA3Q9Y6Q9 1424 aa21.28■■□□□ 1
CLDND1-206ENST00000502299 PHLPP1O60346 1717 aa21.27■■□□□ 1
CLDND1-206ENST00000502299 FOXD1Q16676 465 aa21.27■■□□□ 1
CLDND1-206ENST00000502299 TRPM2O94759 1503 aa21.26■□□□□ 0.99
CLDND1-206ENST00000502299 COL16A1Q07092 1604 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-206ENST00000502299 C14orf37Q86TY3 774 aa21.25■□□□□ 0.99
CLDND1-206ENST00000502299 C19orf44Q9H6X5 657 aa21.24■□□□□ 0.99
CLDND1-206ENST00000502299 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
CLDND1-206ENST00000502299 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
CLDND1-206ENST00000502299 LRP6O75581 1613 aa21.22■□□□□ 0.99
CLDND1-206ENST00000502299 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
CLDND1-206ENST00000502299 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
CLDND1-206ENST00000502299 AMOTL2Q9Y2J4 779 aa21.21■□□□□ 0.99
CLDND1-206ENST00000502299 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
CLDND1-206ENST00000502299 CLTCL1P53675 1640 aa21.2■□□□□ 0.98
CLDND1-206ENST00000502299 SPATA31A6Q5VVP1 1343 aa21.2■□□□□ 0.98
CLDND1-206ENST00000502299 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.19■□□□□ 0.98
CLDND1-206ENST00000502299 ATF3P18847 181 aa21.19■□□□□ 0.98
CLDND1-206ENST00000502299 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
CLDND1-206ENST00000502299 BRINP3Q76B58 766 aa21.17■□□□□ 0.98
CLDND1-206ENST00000502299 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
CLDND1-206ENST00000502299 AHDC1Q5TGY3 1603 aaPredicted RBP21.17■□□□□ 0.98
CLDND1-206ENST00000502299 SETD1AO15047 1707 aaKnown RBP21.17■□□□□ 0.98
CLDND1-206ENST00000502299 KIF1BO60333 1816 aa21.15■□□□□ 0.98
CLDND1-206ENST00000502299 RPGRIP1LQ68CZ1 1315 aa21.15■□□□□ 0.98
CLDND1-206ENST00000502299 MEX3CQ5U5Q3 659 aaKnown RBP21.13■□□□□ 0.97
CLDND1-206ENST00000502299 VGFO15240 615 aaPredicted RBP21.12■□□□□ 0.97
CLDND1-206ENST00000502299 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
CLDND1-206ENST00000502299 NRXN3Q9Y4C0 1643 aa21.11■□□□□ 0.97
CLDND1-206ENST00000502299 DCCP43146 1447 aa21.1■□□□□ 0.97
CLDND1-206ENST00000502299 METP08581 1390 aa21.1■□□□□ 0.97
CLDND1-206ENST00000502299 SHPRHQ149N8 1683 aa21.09■□□□□ 0.97
CLDND1-206ENST00000502299 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
CLDND1-206ENST00000502299 SETBP1Q9Y6X0 1596 aa21.09■□□□□ 0.97
CLDND1-206ENST00000502299 MST1RQ04912 1400 aa21.08■□□□□ 0.97
CLDND1-206ENST00000502299 XRN1Q8IZH2 1706 aaKnown RBP21.08■□□□□ 0.97
CLDND1-206ENST00000502299 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.96
CLDND1-206ENST00000502299 NUTM2BA6NNL0 878 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-206ENST00000502299 NUTM2EB1AL46 878 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-206ENST00000502299 NUTM2AQ8IVF1 878 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-206ENST00000502299 UPF1Q92900 1129 aaKnown RBP eCLIP21.07■□□□□ 0.96
CLDND1-206ENST00000502299 NEXMIFQ5QGS0 1516 aa21.07■□□□□ 0.96
CLDND1-206ENST00000502299 ASXL1Q8IXJ9 1541 aa21.07■□□□□ 0.96
CLDND1-206ENST00000502299 SPATA31E1Q6ZUB1 1445 aa21.04■□□□□ 0.96
CLDND1-206ENST00000502299 RXRBP28702 533 aa21.03■□□□□ 0.96
CLDND1-206ENST00000502299 DDX17Q92841 729 aaKnown RBP21.03■□□□□ 0.96
CLDND1-206ENST00000502299 ADGRL3Q9HAR2 1447 aa21.01■□□□□ 0.95
CLDND1-206ENST00000502299 AFF2P51816 1311 aa21.01■□□□□ 0.95
CLDND1-206ENST00000502299 LRRC59Q96AG4 307 aaKnown RBP21■□□□□ 0.95
CLDND1-206ENST00000502299 NHSL1Q5SYE7 1610 aa20.99■□□□□ 0.95
CLDND1-206ENST00000502299 PPLO60437 1756 aa20.97■□□□□ 0.95
CLDND1-206ENST00000502299 PNPLA6Q8IY17 1366 aa20.97■□□□□ 0.95
CLDND1-206ENST00000502299 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
CLDND1-206ENST00000502299 ADGRF5Q8IZF2 1346 aa20.96■□□□□ 0.95
CLDND1-206ENST00000502299 C8orf37Q96NL8 207 aa20.95■□□□□ 0.94
CLDND1-206ENST00000502299 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
CLDND1-206ENST00000502299 NALCNQ8IZF0 1738 aa20.93■□□□□ 0.94
CLDND1-206ENST00000502299 STAC3Q96MF2 364 aa20.93■□□□□ 0.94
CLDND1-206ENST00000502299 QTRT2Q9H974 415 aaKnown RBP20.92■□□□□ 0.94
CLDND1-206ENST00000502299 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms