RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CHD2O14647 1828 aaKnown RBP24.67■■□□□ 1.54
HDAC6-236ENST00000498808 LRP6O75581 1613 aa24.67■■□□□ 1.54
HDAC6-236ENST00000498808 ZFYVE9O95405 1425 aa24.65■■□□□ 1.54
HDAC6-236ENST00000498808 BCANQ96GW7 911 aa24.65■■□□□ 1.54
HDAC6-236ENST00000498808 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
HDAC6-236ENST00000498808 ANKRD30AQ9BXX3 1397 aa24.63■■□□□ 1.53
HDAC6-236ENST00000498808 PLEKHG1Q9ULL1 1385 aa24.63■■□□□ 1.53
HDAC6-236ENST00000498808 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
HDAC6-236ENST00000498808 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
HDAC6-236ENST00000498808 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
HDAC6-236ENST00000498808 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.53
HDAC6-236ENST00000498808 SPATA31A6Q5VVP1 1343 aa24.59■■□□□ 1.53
HDAC6-236ENST00000498808 GCC2Q8IWJ2 1684 aa24.58■■□□□ 1.53
HDAC6-236ENST00000498808 RIMS2Q9UQ26 1411 aa24.58■■□□□ 1.53
HDAC6-236ENST00000498808 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
HDAC6-236ENST00000498808 NCOA3Q9Y6Q9 1424 aa24.57■■□□□ 1.52
HDAC6-236ENST00000498808 RPRD2Q5VT52 1461 aaKnown RBP24.57■■□□□ 1.52
HDAC6-236ENST00000498808 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
HDAC6-236ENST00000498808 TMEM131LA2VDJ0 1609 aa24.56■■□□□ 1.52
HDAC6-236ENST00000498808 SHPRHQ149N8 1683 aa24.56■■□□□ 1.52
HDAC6-236ENST00000498808 ZNF772Q68DY9 489 aaPredicted RBP24.55■■□□□ 1.52
HDAC6-236ENST00000498808 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
HDAC6-236ENST00000498808 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
HDAC6-236ENST00000498808 MEX3CQ5U5Q3 659 aaKnown RBP24.54■■□□□ 1.52
HDAC6-236ENST00000498808 TBX22Q9Y458 520 aa24.54■■□□□ 1.52
HDAC6-236ENST00000498808 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.54■■□□□ 1.52
HDAC6-236ENST00000498808 ADGRL2O95490 1459 aa24.52■■□□□ 1.52
HDAC6-236ENST00000498808 ADAMTS13Q76LX8 1427 aa24.52■■□□□ 1.52
HDAC6-236ENST00000498808 C14orf37Q86TY3 774 aa24.5■■□□□ 1.51
HDAC6-236ENST00000498808 HDGFP51858 240 aaKnown RBP24.49■■□□□ 1.51
HDAC6-236ENST00000498808 CADPS2Q86UW7 1296 aa24.49■■□□□ 1.51
HDAC6-236ENST00000498808 DIP2AQ14689 1571 aa24.49■■□□□ 1.51
HDAC6-236ENST00000498808 C19orf44Q9H6X5 657 aa24.48■■□□□ 1.51
HDAC6-236ENST00000498808 ANKRD50Q9ULJ7 1429 aa24.46■■□□□ 1.51
HDAC6-236ENST00000498808 ATF3P18847 181 aa24.45■■□□□ 1.5
HDAC6-236ENST00000498808 RXRBP28702 533 aa24.45■■□□□ 1.5
HDAC6-236ENST00000498808 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
HDAC6-236ENST00000498808 NUTM2DQ5VT03 806 aaPredicted RBP24.44■■□□□ 1.5
HDAC6-236ENST00000498808 BRINP3Q76B58 766 aa24.44■■□□□ 1.5
HDAC6-236ENST00000498808 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
HDAC6-236ENST00000498808 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
HDAC6-236ENST00000498808 APLP2Q06481 763 aa24.42■■□□□ 1.5
HDAC6-236ENST00000498808 CHGAP10645 457 aaKnown RBP24.41■■□□□ 1.5
HDAC6-236ENST00000498808 PTPRUQ92729 1446 aa24.41■■□□□ 1.5
HDAC6-236ENST00000498808 NUTM2BA6NNL0 878 aaPredicted RBP24.4■■□□□ 1.5
HDAC6-236ENST00000498808 NUTM2EB1AL46 878 aaPredicted RBP24.4■■□□□ 1.5
HDAC6-236ENST00000498808 NUTM2AQ8IVF1 878 aaPredicted RBP24.4■■□□□ 1.5
HDAC6-236ENST00000498808 UNC13BO14795 1591 aa24.39■■□□□ 1.5
HDAC6-236ENST00000498808 E9PCH4 1651 aa24.39■■□□□ 1.49
HDAC6-236ENST00000498808 TRPM2O94759 1503 aa24.39■■□□□ 1.49
HDAC6-236ENST00000498808 AFF2P51816 1311 aa24.37■■□□□ 1.49
HDAC6-236ENST00000498808 ASXL1Q8IXJ9 1541 aa24.37■■□□□ 1.49
HDAC6-236ENST00000498808 AMOTL2Q9Y2J4 779 aa24.37■■□□□ 1.49
HDAC6-236ENST00000498808 DCCP43146 1447 aa24.36■■□□□ 1.49
HDAC6-236ENST00000498808 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
HDAC6-236ENST00000498808 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
HDAC6-236ENST00000498808 RGS12O14924 1447 aa24.34■■□□□ 1.49
HDAC6-236ENST00000498808 XRN1Q8IZH2 1706 aaKnown RBP24.33■■□□□ 1.49
HDAC6-236ENST00000498808 FAM50AQ14320 339 aaKnown RBP24.33■■□□□ 1.49
HDAC6-236ENST00000498808 MST1RQ04912 1400 aa24.33■■□□□ 1.49
HDAC6-236ENST00000498808 NRXN3Q9Y4C0 1643 aa24.32■■□□□ 1.48
HDAC6-236ENST00000498808 IQGAP3Q86VI3 1631 aa24.29■■□□□ 1.48
HDAC6-236ENST00000498808 C8orf37Q96NL8 207 aa24.27■■□□□ 1.48
HDAC6-236ENST00000498808 PNPLA6Q8IY17 1366 aa24.27■■□□□ 1.48
HDAC6-236ENST00000498808 SETBP1Q9Y6X0 1596 aa24.26■■□□□ 1.47
HDAC6-236ENST00000498808 RBM6P78332 1123 aaKnown RBP24.26■■□□□ 1.47
HDAC6-236ENST00000498808 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
HDAC6-236ENST00000498808 DDX17Q92841 729 aaKnown RBP24.25■■□□□ 1.47
HDAC6-236ENST00000498808 QTRT2Q9H974 415 aaKnown RBP24.25■■□□□ 1.47
HDAC6-236ENST00000498808 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
HDAC6-236ENST00000498808 SRCAPQ6ZRS2 3230 aa24.21■■□□□ 1.47
HDAC6-236ENST00000498808 METP08581 1390 aa24.21■■□□□ 1.47
HDAC6-236ENST00000498808 NALCNQ8IZF0 1738 aa24.2■■□□□ 1.46
HDAC6-236ENST00000498808 NUP155O75694 1391 aa24.17■■□□□ 1.46
HDAC6-236ENST00000498808 ROCK1Q13464 1354 aa24.17■■□□□ 1.46
HDAC6-236ENST00000498808 ADAMTS2O95450 1211 aa24.15■■□□□ 1.46
HDAC6-236ENST00000498808 LAMC1P11047 1609 aa24.14■■□□□ 1.46
HDAC6-236ENST00000498808 SPHKAPQ2M3C7 1700 aa24.14■■□□□ 1.45
HDAC6-236ENST00000498808 NGLY1Q96IV0 654 aa24.14■■□□□ 1.45
HDAC6-236ENST00000498808 ATAD2Q6PL18 1390 aa24.13■■□□□ 1.45
HDAC6-236ENST00000498808 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
HDAC6-236ENST00000498808 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
HDAC6-236ENST00000498808 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
HDAC6-236ENST00000498808 SOS2Q07890 1332 aaPredicted RBP24.09■■□□□ 1.45
HDAC6-236ENST00000498808 USP21Q9UK80 565 aa24.08■■□□□ 1.45
HDAC6-236ENST00000498808 TRPC5Q9UL62 973 aaPredicted RBP24.06■■□□□ 1.44
HDAC6-236ENST00000498808 ATRNO75882 1429 aa24.05■■□□□ 1.44
HDAC6-236ENST00000498808 PTCH1Q13635 1447 aa24.05■■□□□ 1.44
HDAC6-236ENST00000498808 FNBP4Q8N3X1 1017 aaPredicted RBP24.05■■□□□ 1.44
HDAC6-236ENST00000498808 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
HDAC6-236ENST00000498808 CLTCL1P53675 1640 aa24.05■■□□□ 1.44
HDAC6-236ENST00000498808 COL22A1Q8NFW1 1626 aaPredicted RBP24.02■■□□□ 1.44
HDAC6-236ENST00000498808 ROBO2Q9HCK4 1378 aa24.02■■□□□ 1.44
HDAC6-236ENST00000498808 ZRANB1Q9UGI0 708 aa24.01■■□□□ 1.43
HDAC6-236ENST00000498808 EP400Q96L91 3159 aa24■■□□□ 1.43
HDAC6-236ENST00000498808 MYOM2P54296 1465 aa23.99■■□□□ 1.43
HDAC6-236ENST00000498808 ITGAEP38570 1179 aa23.98■■□□□ 1.43
HDAC6-236ENST00000498808 PRAG1Q86YV5 1406 aa23.97■■□□□ 1.43
HDAC6-236ENST00000498808 BCL9LQ86UU0 1499 aa23.96■■□□□ 1.43
HDAC6-236ENST00000498808 KIF1BO60333 1816 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms