RNA–Protein interactions for RNA: ENST00000498623.6

ARPC4-208, Transcript of actin related protein 2/3 complex subunit 4, human

TSL 2 BASIC

Gene ARPC4, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARPC4-208	ENST00000498623	TOM1	O60784	492 aa		34.55	■■■■□ 3.12
ARPC4-208	ENST00000498623	HDGF	P51858	240 aa	Known RBP	34.55	■■■■□ 3.12
ARPC4-208	ENST00000498623	NWD1	Q149M9	1564 aa		34.53	■■■■□ 3.12
ARPC4-208	ENST00000498623	TRPM2	O94759	1503 aa		34.5	■■■■□ 3.11
ARPC4-208	ENST00000498623	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.49	■■■■□ 3.11
ARPC4-208	ENST00000498623	CHGA	P10645	457 aa	Known RBP	34.48	■■■■□ 3.11
ARPC4-208	ENST00000498623	SLC26A8	Q96RN1	970 aa		34.48	■■■■□ 3.11
ARPC4-208	ENST00000498623	PPP1R15A	O75807	674 aa	Predicted RBP	34.46	■■■■□ 3.11
ARPC4-208	ENST00000498623	KCNA6	P17658	529 aa		34.46	■■■■□ 3.11
ARPC4-208	ENST00000498623	NKTR	P30414	1462 aa	Known RBP	34.46	■■■■□ 3.11
ARPC4-208	ENST00000498623	CHD2	O14647	1828 aa	Known RBP	34.45	■■■■□ 3.11
ARPC4-208	ENST00000498623	CLTCL1	P53675	1640 aa		34.44	■■■■□ 3.1
ARPC4-208	ENST00000498623	DIP2A	Q14689	1571 aa		34.44	■■■■□ 3.1
ARPC4-208	ENST00000498623	PIP4K2B	P78356	416 aa		34.4	■■■■□ 3.1
ARPC4-208	ENST00000498623	BCAN	Q96GW7	911 aa		34.4	■■■■□ 3.1
ARPC4-208	ENST00000498623	KIF1B	O60333	1816 aa		34.39	■■■■□ 3.1
ARPC4-208	ENST00000498623	ADAMTS13	Q76LX8	1427 aa		34.38	■■■■□ 3.09
ARPC4-208	ENST00000498623	TRIM52	Q96A61	297 aa		34.38	■■■■□ 3.09
ARPC4-208	ENST00000498623	TBX22	Q9Y458	520 aa		34.37	■■■■□ 3.09
ARPC4-208	ENST00000498623	SCAF1	Q9H7N4	1312 aa	Known RBP	34.36	■■■■□ 3.09
ARPC4-208	ENST00000498623	TMEM94	Q12767	1356 aa		34.36	■■■■□ 3.09
ARPC4-208	ENST00000498623	SLC4A1AP	Q9BWU0	796 aa	Known RBP	34.32	■■■■□ 3.08
ARPC4-208	ENST00000498623	PIK3R4	Q99570	1358 aa		34.32	■■■■□ 3.08
ARPC4-208	ENST00000498623	SETBP1	Q9Y6X0	1596 aa		34.32	■■■■□ 3.08
ARPC4-208	ENST00000498623	NRXN3	Q9Y4C0	1643 aa		34.31	■■■■□ 3.08
ARPC4-208	ENST00000498623	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.31	■■■■□ 3.08
ARPC4-208	ENST00000498623	NEXMIF	Q5QGS0	1516 aa		34.3	■■■■□ 3.08
ARPC4-208	ENST00000498623	HSPA1L	P34931	641 aa		34.29	■■■■□ 3.08
ARPC4-208	ENST00000498623	PROSER2	Q86WR7	435 aa	Predicted RBP	34.29	■■■■□ 3.08
ARPC4-208	ENST00000498623	SENP3	Q9H4L4	574 aa	Predicted RBP	34.27	■■■■□ 3.08
ARPC4-208	ENST00000498623	ZNF326	Q5BKZ1	582 aa	Known RBP	34.24	■■■■□ 3.07
ARPC4-208	ENST00000498623	ACIN1	Q9UKV3	1341 aa	Known RBP	34.23	■■■■□ 3.07
ARPC4-208	ENST00000498623	DISP3	Q9P2K9	1392 aa		34.23	■■■■□ 3.07
ARPC4-208	ENST00000498623	NCOA3	Q9Y6Q9	1424 aa		34.21	■■■■□ 3.07
ARPC4-208	ENST00000498623	MSH6	P52701	1360 aa		34.18	■■■■□ 3.06
ARPC4-208	ENST00000498623	FAM135B	Q49AJ0	1406 aa		34.18	■■■■□ 3.06
ARPC4-208	ENST00000498623	XRN1	Q8IZH2	1706 aa	Known RBP	34.18	■■■■□ 3.06
ARPC4-208	ENST00000498623	RBM33	Q96EV2	1170 aa	Known RBP	34.17	■■■■□ 3.06
ARPC4-208	ENST00000498623	SETD5	Q9C0A6	1442 aa		34.17	■■■■□ 3.06
ARPC4-208	ENST00000498623	PTPRU	Q92729	1446 aa		34.15	■■■■□ 3.06
ARPC4-208	ENST00000498623	PPL	O60437	1756 aa		34.15	■■■■□ 3.06
ARPC4-208	ENST00000498623	MPHOSPH9	Q99550	1183 aa		34.13	■■■■□ 3.05
ARPC4-208	ENST00000498623	ROBO1	Q9Y6N7	1651 aa		34.12	■■■■□ 3.05
ARPC4-208	ENST00000498623	RPGRIP1L	Q68CZ1	1315 aa		34.11	■■■■□ 3.05
ARPC4-208	ENST00000498623	FOXD1	Q16676	465 aa		34.09	■■■■□ 3.05
ARPC4-208	ENST00000498623	CCDC144A	A2RUR9	1427 aa		34.09	■■■■□ 3.05
ARPC4-208	ENST00000498623	SETD1A	O15047	1707 aa	Known RBP	34.09	■■■■□ 3.05
ARPC4-208	ENST00000498623	MED1	Q15648	1581 aa	Predicted RBP	34.08	■■■■□ 3.05
ARPC4-208	ENST00000498623	AMOTL2	Q9Y2J4	779 aa		34.08	■■■■□ 3.05
ARPC4-208	ENST00000498623	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	34.07	■■■■□ 3.05
ARPC4-208	ENST00000498623	VGF	O15240	615 aa	Predicted RBP	34.06	■■■■□ 3.04
ARPC4-208	ENST00000498623	MET	P08581	1390 aa		34.06	■■■■□ 3.04
ARPC4-208	ENST00000498623	RAB3GAP2	Q9H2M9	1393 aa		34.03	■■■■□ 3.04
ARPC4-208	ENST00000498623	IFT172	Q9UG01	1749 aa		34.02	■■■■□ 3.04
ARPC4-208	ENST00000498623	SPATA31E1	Q6ZUB1	1445 aa		34.02	■■■■□ 3.04
ARPC4-208	ENST00000498623	C19orf44	Q9H6X5	657 aa		34	■■■■□ 3.03
ARPC4-208	ENST00000498623	SLAIN2	Q9P270	581 aa		34	■■■■□ 3.03
ARPC4-208	ENST00000498623	DCC	P43146	1447 aa		33.97	■■■■□ 3.03
ARPC4-208	ENST00000498623	C14orf37	Q86TY3	774 aa		33.97	■■■■□ 3.03
ARPC4-208	ENST00000498623	CADPS2	Q86UW7	1296 aa		33.96	■■■■□ 3.03
ARPC4-208	ENST00000498623	PRAG1	Q86YV5	1406 aa		33.96	■■■■□ 3.03
ARPC4-208	ENST00000498623	ILDR2	Q71H61	639 aa		33.93	■■■■□ 3.02
ARPC4-208	ENST00000498623	PTCH1	Q13635	1447 aa		33.92	■■■■□ 3.02
ARPC4-208	ENST00000498623	PHLPP1	O60346	1717 aa		33.91	■■■■□ 3.02
ARPC4-208	ENST00000498623	ANKRD30B	Q9BXX2	1392 aa		33.9	■■■■□ 3.02
ARPC4-208	ENST00000498623	ATF3	P18847	181 aa		33.9	■■■■□ 3.02
ARPC4-208	ENST00000498623	NALCN	Q8IZF0	1738 aa		33.89	■■■■□ 3.02
ARPC4-208	ENST00000498623	ADGRL3	Q9HAR2	1447 aa		33.87	■■■■□ 3.01
ARPC4-208	ENST00000498623	HRC	P23327	699 aa		33.87	■■■■□ 3.01
ARPC4-208	ENST00000498623	COL16A1	Q07092	1604 aa	Predicted RBP	33.84	■■■■□ 3.01
ARPC4-208	ENST00000498623	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.84	■■■■□ 3.01
ARPC4-208	ENST00000498623	RGL3	Q3MIN7	710 aa		33.84	■■■■□ 3.01
ARPC4-208	ENST00000498623	ADGRF5	Q8IZF2	1346 aa		33.83	■■■■□ 3.01
ARPC4-208	ENST00000498623	PIK3C2G	O75747	1445 aa		33.8	■■■■□ 3
ARPC4-208	ENST00000498623	MST1R	Q04912	1400 aa		33.8	■■■■□ 3
ARPC4-208	ENST00000498623	ROBO2	Q9HCK4	1378 aa		33.8	■■■■□ 3
ARPC4-208	ENST00000498623	MYOM2	P54296	1465 aa		33.76	■■■■□ 3
ARPC4-208	ENST00000498623	NRXN1	Q9ULB1	1477 aa		33.76	■■■□□ 2.99
ARPC4-208	ENST00000498623	KNDC1	Q76NI1	1749 aa		33.75	■■■□□ 2.99
ARPC4-208	ENST00000498623	ASXL1	Q8IXJ9	1541 aa		33.74	■■■□□ 2.99
ARPC4-208	ENST00000498623	TECPR2	O15040	1411 aa		33.73	■■■□□ 2.99
ARPC4-208	ENST00000498623	BRINP3	Q76B58	766 aa		33.73	■■■□□ 2.99
ARPC4-208	ENST00000498623	JCAD	Q9P266	1359 aa		33.72	■■■□□ 2.99
ARPC4-208	ENST00000498623	LAMC1	P11047	1609 aa		33.72	■■■□□ 2.99
ARPC4-208	ENST00000498623	NHSL1	Q5SYE7	1610 aa		33.72	■■■□□ 2.99
ARPC4-208	ENST00000498623	PHF23	Q9BUL5	403 aa	Predicted RBP	33.72	■■■□□ 2.99
ARPC4-208	ENST00000498623	SOCS7	O14512	581 aa		33.69	■■■□□ 2.98
ARPC4-208	ENST00000498623	SHPRH	Q149N8	1683 aa		33.68	■■■□□ 2.98
ARPC4-208	ENST00000498623	LRPPRC	P42704	1394 aa	Known RBP	33.68	■■■□□ 2.98
ARPC4-208	ENST00000498623	CDC42BPG	Q6DT37	1551 aa		33.65	■■■□□ 2.98
ARPC4-208	ENST00000498623	ABCC11	Q96J66	1382 aa		33.65	■■■□□ 2.98
ARPC4-208	ENST00000498623	C1orf167	Q5SNV9	1468 aa		33.63	■■■□□ 2.97
ARPC4-208	ENST00000498623	C14orf93	Q9H972	538 aa	Known RBP	33.62	■■■□□ 2.97
ARPC4-208	ENST00000498623	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.61	■■■□□ 2.97
ARPC4-208	ENST00000498623	SPATA31A6	Q5VVP1	1343 aa		33.57	■■■□□ 2.97
ARPC4-208	ENST00000498623	TMEM132E	Q6IEE7	984 aa		33.57	■■■□□ 2.96
ARPC4-208	ENST00000498623	RGS17	Q9UGC6	210 aa	Predicted RBP	33.56	■■■□□ 2.96
ARPC4-208	ENST00000498623	STK26	Q9P289	416 aa		33.55	■■■□□ 2.96
ARPC4-208	ENST00000498623	SIRT1	Q96EB6	747 aa		33.53	■■■□□ 2.96
ARPC4-208	ENST00000498623	CFAP70	Q5T0N1	1121 aa		33.52	■■■□□ 2.96

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms