RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
SSR3-209ENST00000498205 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
SSR3-209ENST00000498205 SULF1Q8IWU6 871 aa10.89□□□□□ -0.67
SSR3-209ENST00000498205 TRIM66O15016 1216 aa10.88□□□□□ -0.67
SSR3-209ENST00000498205 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
SSR3-209ENST00000498205 KCTD12Q96CX2 325 aaKnown RBP10.88□□□□□ -0.67
SSR3-209ENST00000498205 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
SSR3-209ENST00000498205 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
SSR3-209ENST00000498205 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
SSR3-209ENST00000498205 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
SSR3-209ENST00000498205 PHOX2BQ99453 314 aa10.86□□□□□ -0.67
SSR3-209ENST00000498205 TSR3Q9UJK0 312 aaKnown RBP10.86□□□□□ -0.67
SSR3-209ENST00000498205 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
SSR3-209ENST00000498205 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
SSR3-209ENST00000498205 PPP4CP60510 307 aa10.83□□□□□ -0.68
SSR3-209ENST00000498205 TTLL12Q14166 644 aaPredicted RBP10.83□□□□□ -0.68
SSR3-209ENST00000498205 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
SSR3-209ENST00000498205 PDE4DQ08499 809 aa10.82□□□□□ -0.68
SSR3-209ENST00000498205 RNF40O75150 1001 aa10.81□□□□□ -0.68
SSR3-209ENST00000498205 BCAMP50895 628 aa10.81□□□□□ -0.68
SSR3-209ENST00000498205 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
SSR3-209ENST00000498205 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
SSR3-209ENST00000498205 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
SSR3-209ENST00000498205 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
SSR3-209ENST00000498205 GIGYF2Q6Y7W6 1299 aaKnown RBP10.77□□□□□ -0.69
SSR3-209ENST00000498205 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.69
SSR3-209ENST00000498205 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
SSR3-209ENST00000498205 FAM217BQ9NTX9 383 aaPredicted RBP10.77□□□□□ -0.69
SSR3-209ENST00000498205 PTPN5P54829 565 aa10.76□□□□□ -0.69
SSR3-209ENST00000498205 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
SSR3-209ENST00000498205 NLRP7Q8WX94 980 aa10.75□□□□□ -0.69
SSR3-209ENST00000498205 CD46P15529 392 aa10.74□□□□□ -0.69
SSR3-209ENST00000498205 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
SSR3-209ENST00000498205 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
SSR3-209ENST00000498205 DIXDC1Q155Q3 683 aa10.73□□□□□ -0.69
SSR3-209ENST00000498205 CFHP08603 1231 aa10.72□□□□□ -0.69
SSR3-209ENST00000498205 SLC10A3P09131 477 aa10.72□□□□□ -0.69
SSR3-209ENST00000498205 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
SSR3-209ENST00000498205 GCGRP47871 477 aa10.71□□□□□ -0.69
SSR3-209ENST00000498205 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
SSR3-209ENST00000498205 USP46P62068 366 aa10.7□□□□□ -0.7
SSR3-209ENST00000498205 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
SSR3-209ENST00000498205 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
SSR3-209ENST00000498205 PLSCR2Q9NRY7 297 aa10.69□□□□□ -0.7
SSR3-209ENST00000498205 DDRGK1Q96HY6 314 aa10.68□□□□□ -0.7
SSR3-209ENST00000498205 KDM4CQ9H3R0 1056 aa10.68□□□□□ -0.7
SSR3-209ENST00000498205 APLP1P51693 650 aa10.67□□□□□ -0.7
SSR3-209ENST00000498205 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
SSR3-209ENST00000498205 KDM4AO75164 1064 aa10.66□□□□□ -0.7
SSR3-209ENST00000498205 BEGAINQ9BUH8 593 aa10.66□□□□□ -0.7
SSR3-209ENST00000498205 MS4A1P11836 297 aa10.65□□□□□ -0.7
SSR3-209ENST00000498205 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.7
SSR3-209ENST00000498205 PCDHB3Q9Y5E6 796 aa10.65□□□□□ -0.7
SSR3-209ENST00000498205 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
SSR3-209ENST00000498205 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
SSR3-209ENST00000498205 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
SSR3-209ENST00000498205 NR1I2O75469 434 aa10.62□□□□□ -0.71
SSR3-209ENST00000498205 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
SSR3-209ENST00000498205 FUT2Q10981 343 aa10.61□□□□□ -0.71
SSR3-209ENST00000498205 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
SSR3-209ENST00000498205 GJA5P36382 358 aa10.6□□□□□ -0.71
SSR3-209ENST00000498205 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
SSR3-209ENST00000498205 KCNC4Q03721 635 aa10.58□□□□□ -0.72
SSR3-209ENST00000498205 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
SSR3-209ENST00000498205 MTRQ99707 1265 aa10.58□□□□□ -0.72
SSR3-209ENST00000498205 HOXA2O43364 376 aa10.57□□□□□ -0.72
SSR3-209ENST00000498205 Q3C1V9 767 aa10.57□□□□□ -0.72
SSR3-209ENST00000498205 MORN1Q5T089 497 aa10.57□□□□□ -0.72
SSR3-209ENST00000498205 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
SSR3-209ENST00000498205 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
SSR3-209ENST00000498205 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
SSR3-209ENST00000498205 ZPR1O75312 459 aa10.55□□□□□ -0.72
SSR3-209ENST00000498205 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
SSR3-209ENST00000498205 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
SSR3-209ENST00000498205 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
SSR3-209ENST00000498205 COPS2P61201 443 aa10.53□□□□□ -0.72
SSR3-209ENST00000498205 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
SSR3-209ENST00000498205 SCUBE3Q8IX30 993 aa10.53□□□□□ -0.72
SSR3-209ENST00000498205 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
SSR3-209ENST00000498205 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
SSR3-209ENST00000498205 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
SSR3-209ENST00000498205 FDX1P10109 184 aa10.51□□□□□ -0.73
SSR3-209ENST00000498205 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
SSR3-209ENST00000498205 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
SSR3-209ENST00000498205 SPTLC1O15269 473 aa10.5□□□□□ -0.73
SSR3-209ENST00000498205 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
SSR3-209ENST00000498205 MYSM1Q5VVJ2 828 aa10.5□□□□□ -0.73
SSR3-209ENST00000498205 RSBN1LQ6PCB5 846 aaPredicted RBP10.5□□□□□ -0.73
SSR3-209ENST00000498205 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
SSR3-209ENST00000498205 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
SSR3-209ENST00000498205 MOXD2PA6NHM9 499 aa10.49□□□□□ -0.73
SSR3-209ENST00000498205 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
SSR3-209ENST00000498205 PRPF38BQ5VTL8 546 aaKnown RBP10.49□□□□□ -0.73
SSR3-209ENST00000498205 CLK2P49760 499 aaKnown RBP10.48□□□□□ -0.73
SSR3-209ENST00000498205 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
SSR3-209ENST00000498205 ADH1BP00325 375 aa10.47□□□□□ -0.73
SSR3-209ENST00000498205 SPSB2Q99619 263 aa10.47□□□□□ -0.73
SSR3-209ENST00000498205 GGCXP38435 758 aa10.46□□□□□ -0.73
SSR3-209ENST00000498205 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
SSR3-209ENST00000498205 NDUFV2P19404 249 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms