RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 COPS2P61201 443 aa9.96□□□□□ -0.82
CD46-218ENST00000496723 FCHSD2O94868 740 aa9.95□□□□□ -0.82
CD46-218ENST00000496723 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
CD46-218ENST00000496723 PCDHB3Q9Y5E6 796 aa9.95□□□□□ -0.82
CD46-218ENST00000496723 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
CD46-218ENST00000496723 NRG2O14511 850 aaPredicted RBP9.92□□□□□ -0.82
CD46-218ENST00000496723 SEMA3EO15041 775 aa9.91□□□□□ -0.82
CD46-218ENST00000496723 OATP04181 439 aa9.91□□□□□ -0.82
CD46-218ENST00000496723 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
CD46-218ENST00000496723 KMT5BQ4FZB7 885 aa9.91□□□□□ -0.82
CD46-218ENST00000496723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
CD46-218ENST00000496723 ACTN4O43707 911 aaKnown RBP9.9□□□□□ -0.82
CD46-218ENST00000496723 TRAF7Q6Q0C0 670 aa9.89□□□□□ -0.83
CD46-218ENST00000496723 BLOC1S3Q6QNY0 202 aa9.89□□□□□ -0.83
CD46-218ENST00000496723 HIC1Q14526 733 aa9.88□□□□□ -0.83
CD46-218ENST00000496723 SMYD5Q6GMV2 418 aa9.88□□□□□ -0.83
CD46-218ENST00000496723 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
CD46-218ENST00000496723 CFHP08603 1231 aa9.86□□□□□ -0.83
CD46-218ENST00000496723 RSPH4AQ5TD94 716 aa9.86□□□□□ -0.83
CD46-218ENST00000496723 PXYLP1Q8TE99 480 aa9.86□□□□□ -0.83
CD46-218ENST00000496723 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
CD46-218ENST00000496723 TESPA1A2RU30 521 aaPredicted RBP9.85□□□□□ -0.83
CD46-218ENST00000496723 RNF223E7ERA6 249 aa9.84□□□□□ -0.83
CD46-218ENST00000496723 LCE2BO14633 110 aa9.83□□□□□ -0.84
CD46-218ENST00000496723 NR1I2O75469 434 aa9.83□□□□□ -0.84
CD46-218ENST00000496723 SLC10A3P09131 477 aa9.83□□□□□ -0.84
CD46-218ENST00000496723 METTL3Q86U44 580 aaKnown RBP9.83□□□□□ -0.84
CD46-218ENST00000496723 ANKLE1Q8NAG6 615 aa9.83□□□□□ -0.84
CD46-218ENST00000496723 SLC19A1P41440 591 aa9.82□□□□□ -0.84
CD46-218ENST00000496723 GNPATO15228 680 aa9.8□□□□□ -0.84
CD46-218ENST00000496723 ADH1BP00325 375 aa9.8□□□□□ -0.84
CD46-218ENST00000496723 RBM26Q5T8P6 1007 aaKnown RBP9.8□□□□□ -0.84
CD46-218ENST00000496723 TLL1O43897 1013 aa9.79□□□□□ -0.84
CD46-218ENST00000496723 S1PR4O95977 384 aa9.77□□□□□ -0.85
CD46-218ENST00000496723 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
CD46-218ENST00000496723 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
CD46-218ENST00000496723 ZNF598Q86UK7 904 aaKnown RBP9.76□□□□□ -0.85
CD46-218ENST00000496723 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
CD46-218ENST00000496723 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
CD46-218ENST00000496723 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
CD46-218ENST00000496723 GPR37O15354 613 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 PRR20EP86478 221 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 PRR20CP86479 221 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 PRR20DP86480 221 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 PRR20BP86481 221 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 PRR20AP86496 221 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 TRIM67Q6ZTA4 783 aa9.74□□□□□ -0.85
CD46-218ENST00000496723 FECHP22830 423 aa9.73□□□□□ -0.85
CD46-218ENST00000496723 VSIG10Q8N0Z9 540 aa9.73□□□□□ -0.85
CD46-218ENST00000496723 PPEF1O14829 653 aaPredicted RBP9.72□□□□□ -0.85
CD46-218ENST00000496723 LIAT1Q6ZQX7 453 aa9.72□□□□□ -0.85
CD46-218ENST00000496723 SPSB2Q99619 263 aa9.72□□□□□ -0.85
CD46-218ENST00000496723 KDM2AQ9Y2K7 1162 aa9.72□□□□□ -0.85
CD46-218ENST00000496723 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
CD46-218ENST00000496723 SULF1Q8IWU6 871 aa9.71□□□□□ -0.86
CD46-218ENST00000496723 RDH13Q8NBN7 331 aa9.71□□□□□ -0.86
CD46-218ENST00000496723 DGAT1O75907 488 aa9.7□□□□□ -0.86
CD46-218ENST00000496723 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
CD46-218ENST00000496723 ZNF697Q5TEC3 545 aa9.7□□□□□ -0.86
CD46-218ENST00000496723 ATP6V1AP38606 617 aa9.69□□□□□ -0.86
CD46-218ENST00000496723 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
CD46-218ENST00000496723 MORN1Q5T089 497 aa9.69□□□□□ -0.86
CD46-218ENST00000496723 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
CD46-218ENST00000496723 ZNF787Q6DD87 383 aa9.68□□□□□ -0.86
CD46-218ENST00000496723 SALL2Q9Y467 1007 aaPredicted RBP9.68□□□□□ -0.86
CD46-218ENST00000496723 GCGRP47871 477 aa9.67□□□□□ -0.86
CD46-218ENST00000496723 FUT2Q10981 343 aa9.67□□□□□ -0.86
CD46-218ENST00000496723 GPIHBP1Q8IV16 184 aa9.67□□□□□ -0.86
CD46-218ENST00000496723 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
CD46-218ENST00000496723 GDF9O60383 454 aa9.65□□□□□ -0.86
CD46-218ENST00000496723 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
CD46-218ENST00000496723 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
CD46-218ENST00000496723 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
CD46-218ENST00000496723 RPIAP49247 311 aa9.64□□□□□ -0.87
CD46-218ENST00000496723 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
CD46-218ENST00000496723 MYT1Q01538 1121 aa9.63□□□□□ -0.87
CD46-218ENST00000496723 GRIPAP1Q4V328 841 aa9.63□□□□□ -0.87
CD46-218ENST00000496723 SLC27A5Q9Y2P5 690 aa9.63□□□□□ -0.87
CD46-218ENST00000496723 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
CD46-218ENST00000496723 TNFRSF10AO00220 468 aa9.61□□□□□ -0.87
CD46-218ENST00000496723 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
CD46-218ENST00000496723 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
CD46-218ENST00000496723 BRICD5Q6PL45 260 aa9.6□□□□□ -0.87
CD46-218ENST00000496723 FAM160A2Q8N612 972 aaPredicted RBP9.6□□□□□ -0.87
CD46-218ENST00000496723 FAM187AA6NFU0 413 aa9.59□□□□□ -0.87
CD46-218ENST00000496723 FCF1Q9Y324 198 aaKnown RBP9.59□□□□□ -0.87
CD46-218ENST00000496723 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
CD46-218ENST00000496723 Q3C1V9 767 aa9.58□□□□□ -0.88
CD46-218ENST00000496723 MSS51Q4VC12 460 aa9.58□□□□□ -0.88
CD46-218ENST00000496723 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
CD46-218ENST00000496723 IRF6O14896 467 aa9.55□□□□□ -0.88
CD46-218ENST00000496723 CD46P15529 392 aa9.55□□□□□ -0.88
CD46-218ENST00000496723 FOXC1Q12948 553 aa9.55□□□□□ -0.88
CD46-218ENST00000496723 ZBTB24O43167 697 aaPredicted RBP9.54□□□□□ -0.88
CD46-218ENST00000496723 ZNF775Q96BV0 537 aaPredicted RBP9.54□□□□□ -0.88
CD46-218ENST00000496723 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
CD46-218ENST00000496723 CRIPAKQ8N1N5 446 aa9.53□□□□□ -0.88
CD46-218ENST00000496723 TOR4AQ9NXH8 423 aa9.53□□□□□ -0.88
CD46-218ENST00000496723 KDM4AO75164 1064 aa9.52□□□□□ -0.89
CD46-218ENST00000496723 USP46P62068 366 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms