RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	HFM1	A2PYH4	1435 aa		23.91	■■□□□ 1.42
PRKCZ-222	ENST00000496325	PIK3C2B	O00750	1634 aa		23.9	■■□□□ 1.42
PRKCZ-222	ENST00000496325	NOS1	P29475	1434 aa		23.88	■■□□□ 1.41
PRKCZ-222	ENST00000496325	RPRD2	Q5VT52	1461 aa	Known RBP	23.87	■■□□□ 1.41
PRKCZ-222	ENST00000496325	MYO5B	Q9ULV0	1848 aa		23.87	■■□□□ 1.41
PRKCZ-222	ENST00000496325	PHLPP1	O60346	1717 aa		23.84	■■□□□ 1.41
PRKCZ-222	ENST00000496325	TMEM2	Q9UHN6	1383 aa		23.83	■■□□□ 1.41
PRKCZ-222	ENST00000496325	EID1	Q9Y6B2	187 aa		23.83	■■□□□ 1.41
PRKCZ-222	ENST00000496325	IDI1	Q13907	227 aa		23.82	■■□□□ 1.4
PRKCZ-222	ENST00000496325	SLC26A8	Q96RN1	970 aa		23.82	■■□□□ 1.4
PRKCZ-222	ENST00000496325	PROSER2	Q86WR7	435 aa	Predicted RBP	23.81	■■□□□ 1.4
PRKCZ-222	ENST00000496325	KDM5A	P29375	1690 aa	Known RBP	23.8	■■□□□ 1.4
PRKCZ-222	ENST00000496325	KCNA6	P17658	529 aa		23.8	■■□□□ 1.4
PRKCZ-222	ENST00000496325	SPHKAP	Q2M3C7	1700 aa		23.8	■■□□□ 1.4
PRKCZ-222	ENST00000496325	UPF1	Q92900	1129 aa	Known RBP eCLIP	23.78	■■□□□ 1.4
PRKCZ-222	ENST00000496325	LRP6	O75581	1613 aa		23.77	■■□□□ 1.4
PRKCZ-222	ENST00000496325	TRIM52	Q96A61	297 aa		23.77	■■□□□ 1.4
PRKCZ-222	ENST00000496325	NWD1	Q149M9	1564 aa		23.75	■■□□□ 1.39
PRKCZ-222	ENST00000496325	COL16A1	Q07092	1604 aa	Predicted RBP	23.75	■■□□□ 1.39
PRKCZ-222	ENST00000496325	JCAD	Q9P266	1359 aa		23.75	■■□□□ 1.39
PRKCZ-222	ENST00000496325	ADGRB3	O60242	1522 aa		23.74	■■□□□ 1.39
PRKCZ-222	ENST00000496325	SLC52A1	Q9NWF4	448 aa		23.74	■■□□□ 1.39
PRKCZ-222	ENST00000496325	STAG3	Q9UJ98	1225 aa		23.74	■■□□□ 1.39
PRKCZ-222	ENST00000496325	TMEM131L	A2VDJ0	1609 aa		23.73	■■□□□ 1.39
PRKCZ-222	ENST00000496325	SLAIN2	Q9P270	581 aa		23.72	■■□□□ 1.39
PRKCZ-222	ENST00000496325	NKTR	P30414	1462 aa	Known RBP	23.71	■■□□□ 1.39
PRKCZ-222	ENST00000496325	SETD5	Q9C0A6	1442 aa		23.7	■■□□□ 1.38
PRKCZ-222	ENST00000496325	MSH6	P52701	1360 aa		23.7	■■□□□ 1.38
PRKCZ-222	ENST00000496325	SLC4A1AP	Q9BWU0	796 aa	Known RBP	23.67	■■□□□ 1.38
PRKCZ-222	ENST00000496325	CHD2	O14647	1828 aa	Known RBP	23.66	■■□□□ 1.38
PRKCZ-222	ENST00000496325	CLTCL1	P53675	1640 aa		23.66	■■□□□ 1.38
PRKCZ-222	ENST00000496325	CHGA	P10645	457 aa	Known RBP	23.65	■■□□□ 1.38
PRKCZ-222	ENST00000496325	KIF1B	O60333	1816 aa		23.65	■■□□□ 1.38
PRKCZ-222	ENST00000496325	RAB3GAP2	Q9H2M9	1393 aa		23.64	■■□□□ 1.37
PRKCZ-222	ENST00000496325	TRPM2	O94759	1503 aa		23.63	■■□□□ 1.37
PRKCZ-222	ENST00000496325	MEX3C	Q5U5Q3	659 aa	Known RBP	23.62	■■□□□ 1.37
PRKCZ-222	ENST00000496325	FOXD1	Q16676	465 aa		23.61	■■□□□ 1.37
PRKCZ-222	ENST00000496325	BCAN	Q96GW7	911 aa		23.61	■■□□□ 1.37
PRKCZ-222	ENST00000496325	ZNF772	Q68DY9	489 aa	Predicted RBP	23.6	■■□□□ 1.37
PRKCZ-222	ENST00000496325	MPHOSPH9	Q99550	1183 aa		23.6	■■□□□ 1.37
PRKCZ-222	ENST00000496325	SHPRH	Q149N8	1683 aa		23.6	■■□□□ 1.37
PRKCZ-222	ENST00000496325	SPATA31A6	Q5VVP1	1343 aa		23.59	■■□□□ 1.37
PRKCZ-222	ENST00000496325	ZFYVE9	O95405	1425 aa		23.59	■■□□□ 1.37
PRKCZ-222	ENST00000496325	RIMS2	Q9UQ26	1411 aa		23.58	■■□□□ 1.36
PRKCZ-222	ENST00000496325	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	23.56	■■□□□ 1.36
PRKCZ-222	ENST00000496325	AHDC1	Q5TGY3	1603 aa	Predicted RBP	23.56	■■□□□ 1.36
PRKCZ-222	ENST00000496325	RXRB	P28702	533 aa		23.54	■■□□□ 1.36
PRKCZ-222	ENST00000496325	DIP2A	Q14689	1571 aa		23.53	■■□□□ 1.36
PRKCZ-222	ENST00000496325	NUTM2D	Q5VT03	806 aa	Predicted RBP	23.53	■■□□□ 1.36
PRKCZ-222	ENST00000496325	ACIN1	Q9UKV3	1341 aa	Known RBP	23.52	■■□□□ 1.36
PRKCZ-222	ENST00000496325	PLEKHG1	Q9ULL1	1385 aa		23.52	■■□□□ 1.36
PRKCZ-222	ENST00000496325	SRCAP	Q6ZRS2	3230 aa		23.51	■■□□□ 1.35
PRKCZ-222	ENST00000496325	NUTM2B	A6NNL0	878 aa	Predicted RBP	23.51	■■□□□ 1.35
PRKCZ-222	ENST00000496325	NUTM2E	B1AL46	878 aa	Predicted RBP	23.51	■■□□□ 1.35
PRKCZ-222	ENST00000496325	NUTM2A	Q8IVF1	878 aa	Predicted RBP	23.51	■■□□□ 1.35
PRKCZ-222	ENST00000496325	C14orf37	Q86TY3	774 aa		23.49	■■□□□ 1.35
PRKCZ-222	ENST00000496325	CDK12	Q9NYV4	1490 aa	Predicted RBP	23.49	■■□□□ 1.35
PRKCZ-222	ENST00000496325	PPP1R15A	O75807	674 aa	Predicted RBP	23.48	■■□□□ 1.35
PRKCZ-222	ENST00000496325	HDGF	P51858	240 aa	Known RBP	23.48	■■□□□ 1.35
PRKCZ-222	ENST00000496325	ZNF326	Q5BKZ1	582 aa	Known RBP	23.48	■■□□□ 1.35
PRKCZ-222	ENST00000496325	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	23.47	■■□□□ 1.35
PRKCZ-222	ENST00000496325	HRC	P23327	699 aa		23.46	■■□□□ 1.35
PRKCZ-222	ENST00000496325	AFF2	P51816	1311 aa		23.46	■■□□□ 1.35
PRKCZ-222	ENST00000496325	NEXMIF	Q5QGS0	1516 aa		23.46	■■□□□ 1.35
PRKCZ-222	ENST00000496325	RGS12	O14924	1447 aa		23.45	■■□□□ 1.34
PRKCZ-222	ENST00000496325	PPL	O60437	1756 aa		23.45	■■□□□ 1.34
PRKCZ-222	ENST00000496325	ADAMTS13	Q76LX8	1427 aa		23.44	■■□□□ 1.34
PRKCZ-222	ENST00000496325	NCOA3	Q9Y6Q9	1424 aa		23.44	■■□□□ 1.34
PRKCZ-222	ENST00000496325	BRINP3	Q76B58	766 aa		23.44	■■□□□ 1.34
PRKCZ-222	ENST00000496325	CADPS2	Q86UW7	1296 aa		23.43	■■□□□ 1.34
PRKCZ-222	ENST00000496325	TBX22	Q9Y458	520 aa		23.43	■■□□□ 1.34
PRKCZ-222	ENST00000496325	NRXN3	Q9Y4C0	1643 aa		23.42	■■□□□ 1.34
PRKCZ-222	ENST00000496325	C19orf44	Q9H6X5	657 aa		23.42	■■□□□ 1.34
PRKCZ-222	ENST00000496325	CCDC144A	A2RUR9	1427 aa		23.42	■■□□□ 1.34
PRKCZ-222	ENST00000496325	ATF3	P18847	181 aa		23.41	■■□□□ 1.34
PRKCZ-222	ENST00000496325	IFT172	Q9UG01	1749 aa		23.39	■■□□□ 1.33
PRKCZ-222	ENST00000496325	PTPRU	Q92729	1446 aa		23.38	■■□□□ 1.33
PRKCZ-222	ENST00000496325	ASXL1	Q8IXJ9	1541 aa		23.38	■■□□□ 1.33
PRKCZ-222	ENST00000496325	NHSL1	Q5SYE7	1610 aa		23.37	■■□□□ 1.33
PRKCZ-222	ENST00000496325	SETBP1	Q9Y6X0	1596 aa		23.36	■■□□□ 1.33
PRKCZ-222	ENST00000496325	SPATA31E1	Q6ZUB1	1445 aa		23.36	■■□□□ 1.33
PRKCZ-222	ENST00000496325	DDX17	Q92841	729 aa	Known RBP	23.35	■■□□□ 1.33
PRKCZ-222	ENST00000496325	C8orf37	Q96NL8	207 aa		23.35	■■□□□ 1.33
PRKCZ-222	ENST00000496325	QTRT2	Q9H974	415 aa	Known RBP	23.35	■■□□□ 1.33
PRKCZ-222	ENST00000496325	RGL3	Q3MIN7	710 aa		23.34	■■□□□ 1.33
PRKCZ-222	ENST00000496325	ANKRD30B	Q9BXX2	1392 aa		23.33	■■□□□ 1.33
PRKCZ-222	ENST00000496325	RPGRIP1L	Q68CZ1	1315 aa		23.33	■■□□□ 1.32
PRKCZ-222	ENST00000496325	RBM6	P78332	1123 aa	Known RBP	23.32	■■□□□ 1.32
PRKCZ-222	ENST00000496325	AMOTL2	Q9Y2J4	779 aa		23.32	■■□□□ 1.32
PRKCZ-222	ENST00000496325	MST1R	Q04912	1400 aa		23.31	■■□□□ 1.32
PRKCZ-222	ENST00000496325	TRIM26	Q12899	539 aa	Predicted RBP	23.3	■■□□□ 1.32
PRKCZ-222	ENST00000496325	PIK3R4	Q99570	1358 aa		23.29	■■□□□ 1.32
PRKCZ-222	ENST00000496325	VGF	O15240	615 aa	Predicted RBP	23.29	■■□□□ 1.32
PRKCZ-222	ENST00000496325	PNPLA6	Q8IY17	1366 aa		23.28	■■□□□ 1.32
PRKCZ-222	ENST00000496325	XRN1	Q8IZH2	1706 aa	Known RBP	23.28	■■□□□ 1.32
PRKCZ-222	ENST00000496325	MET	P08581	1390 aa		23.26	■■□□□ 1.31
PRKCZ-222	ENST00000496325	DCC	P43146	1447 aa		23.25	■■□□□ 1.31
PRKCZ-222	ENST00000496325	ADGRF5	Q8IZF2	1346 aa		23.25	■■□□□ 1.31
PRKCZ-222	ENST00000496325	ADAMTS2	O95450	1211 aa		23.24	■■□□□ 1.31
PRKCZ-222	ENST00000496325	LRRC59	Q96AG4	307 aa	Known RBP	23.24	■■□□□ 1.31

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms