RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
CCNL1-225ENST00000495471 KCNC4Q03721 635 aa10.28□□□□□ -0.76
CCNL1-225ENST00000495471 TJAP1Q5JTD0 557 aa10.27□□□□□ -0.77
CCNL1-225ENST00000495471 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
CCNL1-225ENST00000495471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCNL1-225ENST00000495471 MTRQ99707 1265 aa10.26□□□□□ -0.77
CCNL1-225ENST00000495471 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
CCNL1-225ENST00000495471 PHOX2BQ99453 314 aa10.25□□□□□ -0.77
CCNL1-225ENST00000495471 SLC10A3P09131 477 aa10.23□□□□□ -0.77
CCNL1-225ENST00000495471 IL21Q9HBE4 155 aa10.23□□□□□ -0.77
CCNL1-225ENST00000495471 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
CCNL1-225ENST00000495471 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
CCNL1-225ENST00000495471 MAP2K5Q13163 448 aa10.21□□□□□ -0.77
CCNL1-225ENST00000495471 CFHP08603 1231 aa10.2□□□□□ -0.78
CCNL1-225ENST00000495471 COPS2P61201 443 aa10.2□□□□□ -0.78
CCNL1-225ENST00000495471 PRR14Q9BWN1 585 aa10.2□□□□□ -0.78
CCNL1-225ENST00000495471 DAXXQ9UER7 740 aaPredicted RBP10.19□□□□□ -0.78
CCNL1-225ENST00000495471 IRF6O14896 467 aa10.18□□□□□ -0.78
CCNL1-225ENST00000495471 KMT5BQ4FZB7 885 aa10.18□□□□□ -0.78
CCNL1-225ENST00000495471 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
CCNL1-225ENST00000495471 BLOC1S3Q6QNY0 202 aa10.17□□□□□ -0.78
CCNL1-225ENST00000495471 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
CCNL1-225ENST00000495471 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
CCNL1-225ENST00000495471 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
CCNL1-225ENST00000495471 DDX11L8A8MPP1 907 aa10.15□□□□□ -0.78
CCNL1-225ENST00000495471 RGS20O76081 388 aa10.15□□□□□ -0.78
CCNL1-225ENST00000495471 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.78
CCNL1-225ENST00000495471 ZPR1O75312 459 aa10.14□□□□□ -0.79
CCNL1-225ENST00000495471 RDH13Q8NBN7 331 aa10.14□□□□□ -0.79
CCNL1-225ENST00000495471 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
CCNL1-225ENST00000495471 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
CCNL1-225ENST00000495471 TLL1O43897 1013 aa10.1□□□□□ -0.79
CCNL1-225ENST00000495471 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
CCNL1-225ENST00000495471 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
CCNL1-225ENST00000495471 SULF1Q8IWU6 871 aa10.1□□□□□ -0.79
CCNL1-225ENST00000495471 ZMYND10O75800 440 aa10.09□□□□□ -0.79
CCNL1-225ENST00000495471 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
CCNL1-225ENST00000495471 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
CCNL1-225ENST00000495471 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
CCNL1-225ENST00000495471 GCGRP47871 477 aa10.07□□□□□ -0.8
CCNL1-225ENST00000495471 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
CCNL1-225ENST00000495471 NR1I2O75469 434 aa10.06□□□□□ -0.8
CCNL1-225ENST00000495471 FUT2Q10981 343 aa10.06□□□□□ -0.8
CCNL1-225ENST00000495471 KRI1Q8N9T8 703 aaKnown RBP10.06□□□□□ -0.8
CCNL1-225ENST00000495471 CD46P15529 392 aa10.04□□□□□ -0.8
CCNL1-225ENST00000495471 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
CCNL1-225ENST00000495471 MORN1Q5T089 497 aa10.03□□□□□ -0.8
CCNL1-225ENST00000495471 ADH1BP00325 375 aa10.02□□□□□ -0.81
CCNL1-225ENST00000495471 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
CCNL1-225ENST00000495471 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
CCNL1-225ENST00000495471 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
CCNL1-225ENST00000495471 CLCN1P35523 988 aa10.01□□□□□ -0.81
CCNL1-225ENST00000495471 GGCXP38435 758 aa10.01□□□□□ -0.81
CCNL1-225ENST00000495471 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
CCNL1-225ENST00000495471 S1PR4O95977 384 aa10□□□□□ -0.81
CCNL1-225ENST00000495471 PRKD2Q9BZL6 878 aa10□□□□□ -0.81
CCNL1-225ENST00000495471 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
CCNL1-225ENST00000495471 RNF223E7ERA6 249 aa9.99□□□□□ -0.81
CCNL1-225ENST00000495471 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
CCNL1-225ENST00000495471 SPSB2Q99619 263 aa9.98□□□□□ -0.81
CCNL1-225ENST00000495471 AMHR2Q16671 573 aa9.97□□□□□ -0.81
CCNL1-225ENST00000495471 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
CCNL1-225ENST00000495471 IRX2Q9BZI1 471 aaPredicted RBP9.97□□□□□ -0.81
CCNL1-225ENST00000495471 PPEF1O14829 653 aaPredicted RBP9.96□□□□□ -0.82
CCNL1-225ENST00000495471 KDM4AO75164 1064 aa9.96□□□□□ -0.82
CCNL1-225ENST00000495471 SLC6A16Q9GZN6 736 aa9.96□□□□□ -0.82
CCNL1-225ENST00000495471 TTLL12Q14166 644 aaPredicted RBP9.95□□□□□ -0.82
CCNL1-225ENST00000495471 V9GY48 417 aaPredicted RBP9.95□□□□□ -0.82
CCNL1-225ENST00000495471 GRIPAP1Q4V328 841 aa9.94□□□□□ -0.82
CCNL1-225ENST00000495471 HLA-CQ95604 372 aa9.94□□□□□ -0.82
CCNL1-225ENST00000495471 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
CCNL1-225ENST00000495471 TRIM66O15016 1216 aa9.93□□□□□ -0.82
CCNL1-225ENST00000495471 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
CCNL1-225ENST00000495471 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
CCNL1-225ENST00000495471 BRICD5Q6PL45 260 aa9.93□□□□□ -0.82
CCNL1-225ENST00000495471 RNF19BQ6ZMZ0 732 aa9.93□□□□□ -0.82
CCNL1-225ENST00000495471 ANKLE1Q8NAG6 615 aa9.93□□□□□ -0.82
CCNL1-225ENST00000495471 USP46P62068 366 aa9.92□□□□□ -0.82
CCNL1-225ENST00000495471 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
CCNL1-225ENST00000495471 FAM160A2Q8N612 972 aaPredicted RBP9.92□□□□□ -0.82
CCNL1-225ENST00000495471 BCANQ96GW7 911 aa9.92□□□□□ -0.82
CCNL1-225ENST00000495471 AK7Q96M32 723 aa9.92□□□□□ -0.82
CCNL1-225ENST00000495471 SALL2Q9Y467 1007 aaPredicted RBP9.92□□□□□ -0.82
CCNL1-225ENST00000495471 HOXA2O43364 376 aa9.91□□□□□ -0.82
CCNL1-225ENST00000495471 PARP9Q8IXQ6 854 aa9.9□□□□□ -0.82
CCNL1-225ENST00000495471 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
CCNL1-225ENST00000495471 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
CCNL1-225ENST00000495471 PLA2G2CQ5R387 149 aa9.89□□□□□ -0.83
CCNL1-225ENST00000495471 SLC24A3Q9HC58 644 aa9.89□□□□□ -0.83
CCNL1-225ENST00000495471 SLC19A1P41440 591 aa9.88□□□□□ -0.83
CCNL1-225ENST00000495471 Q3C1V9 767 aa9.88□□□□□ -0.83
CCNL1-225ENST00000495471 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
CCNL1-225ENST00000495471 MSS51Q4VC12 460 aa9.87□□□□□ -0.83
CCNL1-225ENST00000495471 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
CCNL1-225ENST00000495471 SPIRE2Q8WWL2 714 aa9.85□□□□□ -0.83
CCNL1-225ENST00000495471 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
CCNL1-225ENST00000495471 GFRA3O60609 400 aa9.84□□□□□ -0.83
CCNL1-225ENST00000495471 MS4A1P11836 297 aa9.84□□□□□ -0.83
CCNL1-225ENST00000495471 PDE4DQ08499 809 aa9.84□□□□□ -0.83
CCNL1-225ENST00000495471 SPRYD7Q5W111 196 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms