RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 TRAIPQ9BWF2 469 aa12.1□□□□□ -0.47
RPSA-209ENST00000495394 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
RPSA-209ENST00000495394 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
RPSA-209ENST00000495394 TERF2IPQ9NYB0 399 aa12.09□□□□□ -0.47
RPSA-209ENST00000495394 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
RPSA-209ENST00000495394 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
RPSA-209ENST00000495394 ATP10BO94823 1461 aa12.08□□□□□ -0.48
RPSA-209ENST00000495394 NME8Q8N427 588 aa12.07□□□□□ -0.48
RPSA-209ENST00000495394 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
RPSA-209ENST00000495394 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
RPSA-209ENST00000495394 MYBPC2Q14324 1141 aa12.07□□□□□ -0.48
RPSA-209ENST00000495394 ADGRL1O94910 1474 aa12.07□□□□□ -0.48
RPSA-209ENST00000495394 CCDC18Q5T9S5 1454 aa12.07□□□□□ -0.48
RPSA-209ENST00000495394 NBPF9Q3BBW0 867 aa12.06□□□□□ -0.48
RPSA-209ENST00000495394 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
RPSA-209ENST00000495394 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
RPSA-209ENST00000495394 ASXL2Q76L83 1435 aa12.05□□□□□ -0.48
RPSA-209ENST00000495394 TSPOAP1O95153 1857 aa12.05□□□□□ -0.48
RPSA-209ENST00000495394 OTUD6BQ8N6M0 293 aa12.05□□□□□ -0.48
RPSA-209ENST00000495394 SMARCA5O60264 1052 aaPredicted RBP12.04□□□□□ -0.48
RPSA-209ENST00000495394 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
RPSA-209ENST00000495394 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
RPSA-209ENST00000495394 DIEXFQ68CQ4 756 aaKnown RBP12.04□□□□□ -0.48
RPSA-209ENST00000495394 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
RPSA-209ENST00000495394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPSA-209ENST00000495394 IRF6O14896 467 aa12.03□□□□□ -0.48
RPSA-209ENST00000495394 HSP90AB3PQ58FF7 597 aa12.03□□□□□ -0.48
RPSA-209ENST00000495394 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
RPSA-209ENST00000495394 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
RPSA-209ENST00000495394 VGLL3A8MV65 326 aa12.02□□□□□ -0.48
RPSA-209ENST00000495394 TPD52L2O43399 206 aaKnown RBP12.02□□□□□ -0.48
RPSA-209ENST00000495394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
RPSA-209ENST00000495394 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
RPSA-209ENST00000495394 ANKRD13AQ8IZ07 590 aa12.02□□□□□ -0.49
RPSA-209ENST00000495394 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
RPSA-209ENST00000495394 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
RPSA-209ENST00000495394 APBB1IPQ7Z5R6 666 aaPredicted RBP12.01□□□□□ -0.49
RPSA-209ENST00000495394 MARCH6O60337 910 aa12.01□□□□□ -0.49
RPSA-209ENST00000495394 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
RPSA-209ENST00000495394 GLI2P10070 1586 aa12□□□□□ -0.49
RPSA-209ENST00000495394 RALBP1Q15311 655 aa12□□□□□ -0.49
RPSA-209ENST00000495394 NRDCO43847 1150 aa11.99□□□□□ -0.49
RPSA-209ENST00000495394 SDR16C5Q8N3Y7 309 aa11.99□□□□□ -0.49
RPSA-209ENST00000495394 ARID4AP29374 1257 aaPredicted RBP11.99□□□□□ -0.49
RPSA-209ENST00000495394 SMAP1Q8IYB5 467 aaPredicted RBP11.99□□□□□ -0.49
RPSA-209ENST00000495394 TIAM1Q13009 1591 aa11.99□□□□□ -0.49
RPSA-209ENST00000495394 ARMCX6Q7L4S7 300 aa11.98□□□□□ -0.49
RPSA-209ENST00000495394 PPME1Q9Y570 386 aa11.98□□□□□ -0.49
RPSA-209ENST00000495394 MAP3K1Q13233 1512 aa11.98□□□□□ -0.49
RPSA-209ENST00000495394 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
RPSA-209ENST00000495394 RBM26Q5T8P6 1007 aaKnown RBP11.97□□□□□ -0.49
RPSA-209ENST00000495394 MPNDQ8N594 471 aa11.97□□□□□ -0.49
RPSA-209ENST00000495394 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
RPSA-209ENST00000495394 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
RPSA-209ENST00000495394 KIF14Q15058 1648 aa11.97□□□□□ -0.49
RPSA-209ENST00000495394 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
RPSA-209ENST00000495394 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
RPSA-209ENST00000495394 GOLIM4O00461 696 aa11.96□□□□□ -0.49
RPSA-209ENST00000495394 UTP14CQ5TAP6 766 aaKnown RBP11.96□□□□□ -0.49
RPSA-209ENST00000495394 MTA3Q9BTC8 594 aa11.96□□□□□ -0.49
RPSA-209ENST00000495394 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
RPSA-209ENST00000495394 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
RPSA-209ENST00000495394 ERCC3P19447 782 aa11.96□□□□□ -0.5
RPSA-209ENST00000495394 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.5
RPSA-209ENST00000495394 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
RPSA-209ENST00000495394 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
RPSA-209ENST00000495394 TAF3Q5VWG9 929 aa11.95□□□□□ -0.5
RPSA-209ENST00000495394 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
RPSA-209ENST00000495394 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
RPSA-209ENST00000495394 WASHC2AQ641Q2 1341 aa11.94□□□□□ -0.5
RPSA-209ENST00000495394 POLD1P28340 1107 aa11.94□□□□□ -0.5
RPSA-209ENST00000495394 SUGT1Q9Y2Z0 365 aa11.94□□□□□ -0.5
RPSA-209ENST00000495394 RPS6KL1Q9Y6S9 549 aa11.94□□□□□ -0.5
RPSA-209ENST00000495394 CCER2I3L3R5 266 aa11.93□□□□□ -0.5
RPSA-209ENST00000495394 FOXD4Q12950 439 aaPredicted RBP11.93□□□□□ -0.5
RPSA-209ENST00000495394 SETDB1Q15047 1291 aa11.93□□□□□ -0.5
RPSA-209ENST00000495394 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
RPSA-209ENST00000495394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.93□□□□□ -0.5
RPSA-209ENST00000495394 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
RPSA-209ENST00000495394 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
RPSA-209ENST00000495394 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
RPSA-209ENST00000495394 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
RPSA-209ENST00000495394 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
RPSA-209ENST00000495394 TTC37Q6PGP7 1564 aa11.92□□□□□ -0.5
RPSA-209ENST00000495394 CALRP27797 417 aaKnown RBP11.91□□□□□ -0.5
RPSA-209ENST00000495394 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
RPSA-209ENST00000495394 MKL1Q969V6 931 aa11.91□□□□□ -0.5
RPSA-209ENST00000495394 GEMIN8Q9NWZ8 242 aaKnown RBP11.91□□□□□ -0.5
RPSA-209ENST00000495394 PPRC1Q5VV67 1664 aaKnown RBP11.91□□□□□ -0.5
RPSA-209ENST00000495394 SUPT6HQ7KZ85 1726 aaKnown RBP11.91□□□□□ -0.5
RPSA-209ENST00000495394 ZNF500O60304 480 aaPredicted RBP11.91□□□□□ -0.5
RPSA-209ENST00000495394 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
RPSA-209ENST00000495394 NBPF6Q5VWK0 638 aa11.9□□□□□ -0.5
RPSA-209ENST00000495394 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
RPSA-209ENST00000495394 NBPF4Q96M43 638 aa11.9□□□□□ -0.5
RPSA-209ENST00000495394 SLC20A2Q08357 652 aa11.9□□□□□ -0.51
RPSA-209ENST00000495394 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.51
RPSA-209ENST00000495394 NGEFQ8N5V2 710 aa11.9□□□□□ -0.51
RPSA-209ENST00000495394 ANP32CO43423 234 aa11.89□□□□□ -0.51
RPSA-209ENST00000495394 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms