RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
SMC4-224ENST00000494612 PCDHB3Q9Y5E6 796 aa11.27□□□□□ -0.61
SMC4-224ENST00000494612 DGAT1O75907 488 aa11.25□□□□□ -0.61
SMC4-224ENST00000494612 EYA1Q99502 592 aa11.25□□□□□ -0.61
SMC4-224ENST00000494612 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
SMC4-224ENST00000494612 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
SMC4-224ENST00000494612 MYT1Q01538 1121 aa11.23□□□□□ -0.61
SMC4-224ENST00000494612 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
SMC4-224ENST00000494612 PTGDRQ13258 359 aa11.21□□□□□ -0.61
SMC4-224ENST00000494612 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
SMC4-224ENST00000494612 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.61
SMC4-224ENST00000494612 PRR20EP86478 221 aa11.2□□□□□ -0.62
SMC4-224ENST00000494612 PRR20CP86479 221 aa11.2□□□□□ -0.62
SMC4-224ENST00000494612 PRR20DP86480 221 aa11.2□□□□□ -0.62
SMC4-224ENST00000494612 PRR20BP86481 221 aa11.2□□□□□ -0.62
SMC4-224ENST00000494612 PRR20AP86496 221 aa11.2□□□□□ -0.62
SMC4-224ENST00000494612 BLOC1S3Q6QNY0 202 aa11.19□□□□□ -0.62
SMC4-224ENST00000494612 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
SMC4-224ENST00000494612 FAM187AA6NFU0 413 aa11.17□□□□□ -0.62
SMC4-224ENST00000494612 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
SMC4-224ENST00000494612 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
SMC4-224ENST00000494612 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
SMC4-224ENST00000494612 POTECB2RU33 542 aa11.14□□□□□ -0.63
SMC4-224ENST00000494612 SEMA3EO15041 775 aa11.14□□□□□ -0.63
SMC4-224ENST00000494612 TLL1O43897 1013 aa11.14□□□□□ -0.63
SMC4-224ENST00000494612 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
SMC4-224ENST00000494612 S1PR4O95977 384 aa11.13□□□□□ -0.63
SMC4-224ENST00000494612 KMT5BQ4FZB7 885 aa11.13□□□□□ -0.63
SMC4-224ENST00000494612 ADGRG1Q9Y653 693 aa11.13□□□□□ -0.63
SMC4-224ENST00000494612 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
SMC4-224ENST00000494612 TNFRSF10AO00220 468 aa11.11□□□□□ -0.63
SMC4-224ENST00000494612 DNAJB2P25686 324 aa11.11□□□□□ -0.63
SMC4-224ENST00000494612 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
SMC4-224ENST00000494612 ACTN4O43707 911 aaKnown RBP11.09□□□□□ -0.63
SMC4-224ENST00000494612 GDF9O60383 454 aa11.09□□□□□ -0.63
SMC4-224ENST00000494612 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
SMC4-224ENST00000494612 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
SMC4-224ENST00000494612 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
SMC4-224ENST00000494612 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
SMC4-224ENST00000494612 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
SMC4-224ENST00000494612 FCHSD2O94868 740 aa11.07□□□□□ -0.64
SMC4-224ENST00000494612 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
SMC4-224ENST00000494612 ADH1BP00325 375 aa11.06□□□□□ -0.64
SMC4-224ENST00000494612 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
SMC4-224ENST00000494612 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
SMC4-224ENST00000494612 NR1I2O75469 434 aa11.05□□□□□ -0.64
SMC4-224ENST00000494612 CFHP08603 1231 aa11.05□□□□□ -0.64
SMC4-224ENST00000494612 AAASQ9NRG9 546 aa11.05□□□□□ -0.64
SMC4-224ENST00000494612 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
SMC4-224ENST00000494612 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
SMC4-224ENST00000494612 SLC10A3P09131 477 aa11□□□□□ -0.65
SMC4-224ENST00000494612 FOXC1Q12948 553 aa11□□□□□ -0.65
SMC4-224ENST00000494612 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
SMC4-224ENST00000494612 PXYLP1Q8TE99 480 aa11□□□□□ -0.65
SMC4-224ENST00000494612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
SMC4-224ENST00000494612 OATP04181 439 aa10.99□□□□□ -0.65
SMC4-224ENST00000494612 HIC1Q14526 733 aa10.99□□□□□ -0.65
SMC4-224ENST00000494612 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
SMC4-224ENST00000494612 LCE2AQ5TA79 106 aaPredicted RBP10.97□□□□□ -0.65
SMC4-224ENST00000494612 GPR37O15354 613 aa10.96□□□□□ -0.65
SMC4-224ENST00000494612 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
SMC4-224ENST00000494612 FECHP22830 423 aa10.95□□□□□ -0.66
SMC4-224ENST00000494612 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
SMC4-224ENST00000494612 SMYD5Q6GMV2 418 aa10.95□□□□□ -0.66
SMC4-224ENST00000494612 METTL3Q86U44 580 aaKnown RBP10.95□□□□□ -0.66
SMC4-224ENST00000494612 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
SMC4-224ENST00000494612 CRIPAKQ8N1N5 446 aa10.95□□□□□ -0.66
SMC4-224ENST00000494612 WFS1O76024 890 aa10.94□□□□□ -0.66
SMC4-224ENST00000494612 SPSB2Q99619 263 aa10.94□□□□□ -0.66
SMC4-224ENST00000494612 C11orf95C9JLR9 678 aaPredicted RBP10.92□□□□□ -0.66
SMC4-224ENST00000494612 AXIN1O15169 862 aa10.92□□□□□ -0.66
SMC4-224ENST00000494612 GNPATO15228 680 aa10.92□□□□□ -0.66
SMC4-224ENST00000494612 RPIAP49247 311 aa10.92□□□□□ -0.66
SMC4-224ENST00000494612 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
SMC4-224ENST00000494612 CD2BP2O95400 341 aaKnown RBP10.91□□□□□ -0.66
SMC4-224ENST00000494612 AVPP01185 164 aa10.9□□□□□ -0.66
SMC4-224ENST00000494612 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
SMC4-224ENST00000494612 CTC1Q2NKJ3 1217 aa10.9□□□□□ -0.66
SMC4-224ENST00000494612 GMPR2Q9P2T1 348 aaKnown RBP10.9□□□□□ -0.66
SMC4-224ENST00000494612 STK17AQ9UEE5 414 aa10.9□□□□□ -0.66
SMC4-224ENST00000494612 DACH1Q9UI36 760 aa10.9□□□□□ -0.66
SMC4-224ENST00000494612 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
SMC4-224ENST00000494612 PUS10Q3MIT2 529 aaKnown RBP10.89□□□□□ -0.67
SMC4-224ENST00000494612 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
SMC4-224ENST00000494612 INSM1Q01101 510 aaPredicted RBP10.87□□□□□ -0.67
SMC4-224ENST00000494612 DAXXQ9UER7 740 aaPredicted RBP10.87□□□□□ -0.67
SMC4-224ENST00000494612 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
SMC4-224ENST00000494612 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
SMC4-224ENST00000494612 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
SMC4-224ENST00000494612 SMCPP49901 116 aaPredicted RBP10.83□□□□□ -0.68
SMC4-224ENST00000494612 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
SMC4-224ENST00000494612 WIPF1O43516 503 aa10.82□□□□□ -0.68
SMC4-224ENST00000494612 NFX1Q12986 1120 aaKnown RBP10.82□□□□□ -0.68
SMC4-224ENST00000494612 NLRP7Q8WX94 980 aa10.82□□□□□ -0.68
SMC4-224ENST00000494612 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
SMC4-224ENST00000494612 MORN1Q5T089 497 aa10.79□□□□□ -0.68
SMC4-224ENST00000494612 RDH13Q8NBN7 331 aa10.79□□□□□ -0.68
SMC4-224ENST00000494612 DDX11L8A8MPP1 907 aa10.78□□□□□ -0.68
SMC4-224ENST00000494612 GCGRP47871 477 aa10.78□□□□□ -0.68
SMC4-224ENST00000494612 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms