RNA–Protein interactions for RNA: ENST00000494306.1

COX5B-204, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 2

Gene COX5B, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-204ENST00000494306 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.64
COX5B-204ENST00000494306 RPRD2Q5VT52 1461 aaKnown RBP19.02■□□□□ 0.63
COX5B-204ENST00000494306 ANKRD50Q9ULJ7 1429 aa19.01■□□□□ 0.63
COX5B-204ENST00000494306 BCANQ96GW7 911 aa19.01■□□□□ 0.63
COX5B-204ENST00000494306 NKTRP30414 1462 aaKnown RBP19.01■□□□□ 0.63
COX5B-204ENST00000494306 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
COX5B-204ENST00000494306 ZFYVE9O95405 1425 aa19■□□□□ 0.63
COX5B-204ENST00000494306 ROBO1Q9Y6N7 1651 aa18.99■□□□□ 0.63
COX5B-204ENST00000494306 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
COX5B-204ENST00000494306 POTEAQ6S8J7 498 aa18.98■□□□□ 0.63
COX5B-204ENST00000494306 SLAIN2Q9P270 581 aa18.98■□□□□ 0.63
COX5B-204ENST00000494306 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
COX5B-204ENST00000494306 MSH6P52701 1360 aa18.96■□□□□ 0.63
COX5B-204ENST00000494306 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
COX5B-204ENST00000494306 TBX22Q9Y458 520 aa18.95■□□□□ 0.62
COX5B-204ENST00000494306 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
COX5B-204ENST00000494306 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
COX5B-204ENST00000494306 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
COX5B-204ENST00000494306 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
COX5B-204ENST00000494306 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
COX5B-204ENST00000494306 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
COX5B-204ENST00000494306 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
COX5B-204ENST00000494306 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
COX5B-204ENST00000494306 UNC13BO14795 1591 aa18.89■□□□□ 0.62
COX5B-204ENST00000494306 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
COX5B-204ENST00000494306 ADAMTS13Q76LX8 1427 aa18.89■□□□□ 0.61
COX5B-204ENST00000494306 JCADQ9P266 1359 aa18.88■□□□□ 0.61
COX5B-204ENST00000494306 PHLPP1O60346 1717 aa18.87■□□□□ 0.61
COX5B-204ENST00000494306 ROCK1Q13464 1354 aa18.87■□□□□ 0.61
COX5B-204ENST00000494306 E9PCH4 1651 aa18.86■□□□□ 0.61
COX5B-204ENST00000494306 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
COX5B-204ENST00000494306 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
COX5B-204ENST00000494306 COL16A1Q07092 1604 aaPredicted RBP18.83■□□□□ 0.61
COX5B-204ENST00000494306 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
COX5B-204ENST00000494306 NUP155O75694 1391 aa18.82■□□□□ 0.6
COX5B-204ENST00000494306 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
COX5B-204ENST00000494306 DIP2AQ14689 1571 aa18.82■□□□□ 0.6
COX5B-204ENST00000494306 CADPS2Q86UW7 1296 aa18.82■□□□□ 0.6
COX5B-204ENST00000494306 ATF3P18847 181 aa18.81■□□□□ 0.6
COX5B-204ENST00000494306 AMOTL2Q9Y2J4 779 aa18.81■□□□□ 0.6
COX5B-204ENST00000494306 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
COX5B-204ENST00000494306 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
COX5B-204ENST00000494306 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
COX5B-204ENST00000494306 LRP6O75581 1613 aa18.78■□□□□ 0.6
COX5B-204ENST00000494306 ITGAEP38570 1179 aa18.77■□□□□ 0.6
COX5B-204ENST00000494306 TRPM2O94759 1503 aa18.77■□□□□ 0.6
COX5B-204ENST00000494306 AHDC1Q5TGY3 1603 aaPredicted RBP18.77■□□□□ 0.6
COX5B-204ENST00000494306 BRINP3Q76B58 766 aa18.76■□□□□ 0.59
COX5B-204ENST00000494306 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
COX5B-204ENST00000494306 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
COX5B-204ENST00000494306 SETD1AO15047 1707 aaKnown RBP18.72■□□□□ 0.59
COX5B-204ENST00000494306 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
COX5B-204ENST00000494306 DCCP43146 1447 aa18.72■□□□□ 0.59
COX5B-204ENST00000494306 SHPRHQ149N8 1683 aa18.71■□□□□ 0.59
COX5B-204ENST00000494306 SETBP1Q9Y6X0 1596 aa18.71■□□□□ 0.59
COX5B-204ENST00000494306 METP08581 1390 aa18.7■□□□□ 0.58
COX5B-204ENST00000494306 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
COX5B-204ENST00000494306 XRN1Q8IZH2 1706 aaKnown RBP18.69■□□□□ 0.58
COX5B-204ENST00000494306 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
COX5B-204ENST00000494306 MST1RQ04912 1400 aa18.68■□□□□ 0.58
COX5B-204ENST00000494306 SPHKAPQ2M3C7 1700 aa18.67■□□□□ 0.58
COX5B-204ENST00000494306 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
COX5B-204ENST00000494306 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
COX5B-204ENST00000494306 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
COX5B-204ENST00000494306 UPF1Q92900 1129 aaKnown RBP eCLIP18.67■□□□□ 0.58
COX5B-204ENST00000494306 ASXL1Q8IXJ9 1541 aa18.67■□□□□ 0.58
COX5B-204ENST00000494306 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
COX5B-204ENST00000494306 PPP4R3CPQ6ZMV5 832 aa18.66■□□□□ 0.58
COX5B-204ENST00000494306 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
COX5B-204ENST00000494306 RXRBP28702 533 aa18.65■□□□□ 0.58
COX5B-204ENST00000494306 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
COX5B-204ENST00000494306 NEXMIFQ5QGS0 1516 aa18.63■□□□□ 0.57
COX5B-204ENST00000494306 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
COX5B-204ENST00000494306 ADGRL3Q9HAR2 1447 aa18.62■□□□□ 0.57
COX5B-204ENST00000494306 CLTCL1P53675 1640 aa18.62■□□□□ 0.57
COX5B-204ENST00000494306 NHSL1Q5SYE7 1610 aa18.61■□□□□ 0.57
COX5B-204ENST00000494306 AFF2P51816 1311 aa18.61■□□□□ 0.57
COX5B-204ENST00000494306 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.57
COX5B-204ENST00000494306 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
COX5B-204ENST00000494306 NAIPQ13075 1403 aa18.57■□□□□ 0.56
COX5B-204ENST00000494306 C8orf37Q96NL8 207 aa18.56■□□□□ 0.56
COX5B-204ENST00000494306 NALCNQ8IZF0 1738 aa18.56■□□□□ 0.56
COX5B-204ENST00000494306 C1orf167Q5SNV9 1468 aa18.56■□□□□ 0.56
COX5B-204ENST00000494306 VGFO15240 615 aaPredicted RBP18.55■□□□□ 0.56
COX5B-204ENST00000494306 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
COX5B-204ENST00000494306 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
COX5B-204ENST00000494306 PTCH1Q13635 1447 aa18.54■□□□□ 0.56
COX5B-204ENST00000494306 ROBO2Q9HCK4 1378 aa18.54■□□□□ 0.56
COX5B-204ENST00000494306 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
COX5B-204ENST00000494306 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
COX5B-204ENST00000494306 KIF1BO60333 1816 aa18.53■□□□□ 0.56
COX5B-204ENST00000494306 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
COX5B-204ENST00000494306 RBM6P78332 1123 aaKnown RBP18.52■□□□□ 0.56
COX5B-204ENST00000494306 SOS2Q07890 1332 aaPredicted RBP18.51■□□□□ 0.55
COX5B-204ENST00000494306 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
COX5B-204ENST00000494306 PRAG1Q86YV5 1406 aa18.5■□□□□ 0.55
COX5B-204ENST00000494306 LAMC1P11047 1609 aa18.5■□□□□ 0.55
COX5B-204ENST00000494306 RGS12O14924 1447 aa18.49■□□□□ 0.55
COX5B-204ENST00000494306 ADAMTS2O95450 1211 aa18.49■□□□□ 0.55
COX5B-204ENST00000494306 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms