RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
MINDY4-203ENST00000494187 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
MINDY4-203ENST00000494187 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
MINDY4-203ENST00000494187 ERBINQ96RT1 1412 aa12.1□□□□□ -0.47
MINDY4-203ENST00000494187 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
MINDY4-203ENST00000494187 HMOX1P09601 288 aa12.1□□□□□ -0.47
MINDY4-203ENST00000494187 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
MINDY4-203ENST00000494187 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
MINDY4-203ENST00000494187 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
MINDY4-203ENST00000494187 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
MINDY4-203ENST00000494187 COG6Q9Y2V7 657 aa12.09□□□□□ -0.47
MINDY4-203ENST00000494187 APBB1O00213 710 aa12.08□□□□□ -0.48
MINDY4-203ENST00000494187 BCAR3O75815 825 aa12.08□□□□□ -0.48
MINDY4-203ENST00000494187 ASXL2Q76L83 1435 aa12.08□□□□□ -0.48
MINDY4-203ENST00000494187 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
MINDY4-203ENST00000494187 TESK2Q96S53 571 aa12.08□□□□□ -0.48
MINDY4-203ENST00000494187 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
MINDY4-203ENST00000494187 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
MINDY4-203ENST00000494187 PLCH2O75038 1416 aa12.06□□□□□ -0.48
MINDY4-203ENST00000494187 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
MINDY4-203ENST00000494187 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
MINDY4-203ENST00000494187 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
MINDY4-203ENST00000494187 FAM135AQ9P2D6 1515 aa12.05□□□□□ -0.48
MINDY4-203ENST00000494187 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
MINDY4-203ENST00000494187 HDGFL2Q7Z4V5 671 aaPredicted RBP12.05□□□□□ -0.48
MINDY4-203ENST00000494187 TSR2Q969E8 191 aaKnown RBP12.04□□□□□ -0.48
MINDY4-203ENST00000494187 PMFBP1Q8TBY8 1022 aa12.04□□□□□ -0.48
MINDY4-203ENST00000494187 ZNF428Q96B54 188 aa12.04□□□□□ -0.48
MINDY4-203ENST00000494187 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
MINDY4-203ENST00000494187 EVC2Q86UK5 1308 aa12.03□□□□□ -0.48
MINDY4-203ENST00000494187 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
MINDY4-203ENST00000494187 A0A0G2JS52 829 aa12.03□□□□□ -0.48
MINDY4-203ENST00000494187 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
MINDY4-203ENST00000494187 MBD5Q9P267 1494 aa12.03□□□□□ -0.48
MINDY4-203ENST00000494187 NOS1P29475 1434 aa12.02□□□□□ -0.48
MINDY4-203ENST00000494187 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
MINDY4-203ENST00000494187 THUMPD2Q9BTF0 503 aaKnown RBP12.02□□□□□ -0.49
MINDY4-203ENST00000494187 DHX29Q7Z478 1369 aaKnown RBP12.01□□□□□ -0.49
MINDY4-203ENST00000494187 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
MINDY4-203ENST00000494187 MSH5O43196 834 aa12.01□□□□□ -0.49
MINDY4-203ENST00000494187 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
MINDY4-203ENST00000494187 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
MINDY4-203ENST00000494187 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 TERF2IPQ9NYB0 399 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 NECTIN2Q92692 538 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 PRAG1Q86YV5 1406 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 CLASP1Q7Z460 1538 aa12□□□□□ -0.49
MINDY4-203ENST00000494187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
MINDY4-203ENST00000494187 RRS1Q15050 365 aaKnown RBP11.99□□□□□ -0.49
MINDY4-203ENST00000494187 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
MINDY4-203ENST00000494187 CDK19Q9BWU1 502 aa11.99□□□□□ -0.49
MINDY4-203ENST00000494187 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
MINDY4-203ENST00000494187 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
MINDY4-203ENST00000494187 A2MP01023 1474 aa11.98□□□□□ -0.49
MINDY4-203ENST00000494187 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
MINDY4-203ENST00000494187 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
MINDY4-203ENST00000494187 ABCA8O94911 1581 aa11.97□□□□□ -0.49
MINDY4-203ENST00000494187 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
MINDY4-203ENST00000494187 RIPK4P57078 832 aa11.97□□□□□ -0.49
MINDY4-203ENST00000494187 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
MINDY4-203ENST00000494187 ABCC2Q92887 1545 aa11.97□□□□□ -0.49
MINDY4-203ENST00000494187 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
MINDY4-203ENST00000494187 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
MINDY4-203ENST00000494187 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.49
MINDY4-203ENST00000494187 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.5
MINDY4-203ENST00000494187 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.5
MINDY4-203ENST00000494187 NSD3Q9BZ95 1437 aa11.96□□□□□ -0.5
MINDY4-203ENST00000494187 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
MINDY4-203ENST00000494187 WDR7Q9Y4E6 1490 aa11.96□□□□□ -0.5
MINDY4-203ENST00000494187 TNNQ9UQP3 1299 aa11.95□□□□□ -0.5
MINDY4-203ENST00000494187 PDE4AP27815 886 aa11.95□□□□□ -0.5
MINDY4-203ENST00000494187 XPCQ01831 940 aaPredicted RBP11.95□□□□□ -0.5
MINDY4-203ENST00000494187 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
MINDY4-203ENST00000494187 DCTN1Q14203 1278 aa11.94□□□□□ -0.5
MINDY4-203ENST00000494187 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
MINDY4-203ENST00000494187 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
MINDY4-203ENST00000494187 GCC2Q8IWJ2 1684 aa11.93□□□□□ -0.5
MINDY4-203ENST00000494187 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
MINDY4-203ENST00000494187 DIAPH1O60610 1272 aaKnown RBP11.92□□□□□ -0.5
MINDY4-203ENST00000494187 NME9Q86XW9 330 aa11.92□□□□□ -0.5
MINDY4-203ENST00000494187 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
MINDY4-203ENST00000494187 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
MINDY4-203ENST00000494187 EXOSC9Q06265 439 aaKnown RBP11.92□□□□□ -0.5
MINDY4-203ENST00000494187 SLC4A10Q6U841 1118 aa11.92□□□□□ -0.5
MINDY4-203ENST00000494187 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
MINDY4-203ENST00000494187 ADGRL2O95490 1459 aa11.92□□□□□ -0.5
MINDY4-203ENST00000494187 EID1Q9Y6B2 187 aa11.91□□□□□ -0.5
MINDY4-203ENST00000494187 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
MINDY4-203ENST00000494187 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
MINDY4-203ENST00000494187 E9PSI1 815 aa11.9□□□□□ -0.5
MINDY4-203ENST00000494187 COG3Q96JB2 828 aa11.9□□□□□ -0.5
MINDY4-203ENST00000494187 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
MINDY4-203ENST00000494187 HSP90AA1P07900 732 aaKnown RBP11.9□□□□□ -0.5
MINDY4-203ENST00000494187 AMPHP49418 695 aa11.9□□□□□ -0.5
MINDY4-203ENST00000494187 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
MINDY4-203ENST00000494187 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
MINDY4-203ENST00000494187 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms