RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
TRA2B-216ENST00000493864 AK7Q96M32 723 aa10.63□□□□□ -0.71
TRA2B-216ENST00000493864 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
TRA2B-216ENST00000493864 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
TRA2B-216ENST00000493864 RIMBP3CA6NJZ7 1639 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 RIMBP3BA6NNM3 1639 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 RIMBP3Q9UFD9 1639 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 IRF6O14896 467 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 PRSS12P56730 875 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
TRA2B-216ENST00000493864 ARHGAP33O14559 1287 aa10.61□□□□□ -0.71
TRA2B-216ENST00000493864 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
TRA2B-216ENST00000493864 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
TRA2B-216ENST00000493864 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-216ENST00000493864 PRXQ9BXM0 1461 aa10.6□□□□□ -0.71
TRA2B-216ENST00000493864 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
TRA2B-216ENST00000493864 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
TRA2B-216ENST00000493864 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
TRA2B-216ENST00000493864 UBTFP17480 764 aaKnown RBP10.58□□□□□ -0.72
TRA2B-216ENST00000493864 PBX2P40425 430 aa10.58□□□□□ -0.72
TRA2B-216ENST00000493864 SYNJ2O15056 1496 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 RAPGEF2Q9Y4G8 1499 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 TRIM66O15016 1216 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 PROX2Q3B8N5 592 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 DMRTA1Q5VZB9 504 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 TTC13Q8NBP0 860 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 ARHGEF11O15085 1522 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
TRA2B-216ENST00000493864 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
TRA2B-216ENST00000493864 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
TRA2B-216ENST00000493864 CLASP1Q7Z460 1538 aa10.56□□□□□ -0.72
TRA2B-216ENST00000493864 KIF21BO75037 1637 aa10.55□□□□□ -0.72
TRA2B-216ENST00000493864 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
TRA2B-216ENST00000493864 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
TRA2B-216ENST00000493864 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
TRA2B-216ENST00000493864 CUL7Q14999 1698 aa10.54□□□□□ -0.72
TRA2B-216ENST00000493864 GOLGA3Q08378 1498 aa10.54□□□□□ -0.72
TRA2B-216ENST00000493864 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
TRA2B-216ENST00000493864 PACS2Q86VP3 889 aa10.53□□□□□ -0.72
TRA2B-216ENST00000493864 OATP04181 439 aa10.52□□□□□ -0.73
TRA2B-216ENST00000493864 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
TRA2B-216ENST00000493864 PDE4DQ08499 809 aa10.52□□□□□ -0.73
TRA2B-216ENST00000493864 CEP170Q5SW79 1584 aa10.52□□□□□ -0.73
TRA2B-216ENST00000493864 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
TRA2B-216ENST00000493864 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
TRA2B-216ENST00000493864 KIAA1468Q9P260 1216 aa10.51□□□□□ -0.73
TRA2B-216ENST00000493864 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
TRA2B-216ENST00000493864 NUDT18Q6ZVK8 323 aa10.5□□□□□ -0.73
TRA2B-216ENST00000493864 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
TRA2B-216ENST00000493864 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
TRA2B-216ENST00000493864 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
TRA2B-216ENST00000493864 TNIKQ9UKE5 1360 aa10.5□□□□□ -0.73
TRA2B-216ENST00000493864 C3orf80F5H4A9 247 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 SMAPO00193 183 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
TRA2B-216ENST00000493864 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 NLRP7Q8WX94 980 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 TATDN2Q93075 761 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 SLC4A5Q9BY07 1137 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
TRA2B-216ENST00000493864 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-216ENST00000493864 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRA2B-216ENST00000493864 TTLL12Q14166 644 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-216ENST00000493864 AMHR2Q16671 573 aa10.48□□□□□ -0.73
TRA2B-216ENST00000493864 GPBP1L1Q9HC44 474 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-216ENST00000493864 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
TRA2B-216ENST00000493864 EYA1Q99502 592 aa10.47□□□□□ -0.73
TRA2B-216ENST00000493864 ERCC6L2Q5T890 1561 aa10.47□□□□□ -0.73
TRA2B-216ENST00000493864 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
TRA2B-216ENST00000493864 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
TRA2B-216ENST00000493864 ANKRD13DQ6ZTN6 518 aa10.46□□□□□ -0.73
TRA2B-216ENST00000493864 NUP160Q12769 1436 aa10.45□□□□□ -0.74
TRA2B-216ENST00000493864 POTEMA6NI47 508 aa10.45□□□□□ -0.74
TRA2B-216ENST00000493864 SEPT9Q9UHD8 586 aaPredicted RBP10.45□□□□□ -0.74
TRA2B-216ENST00000493864 RCCD1A6NED2 376 aa10.44□□□□□ -0.74
TRA2B-216ENST00000493864 TK2O00142 265 aa10.44□□□□□ -0.74
TRA2B-216ENST00000493864 CYB5RLQ6IPT4 315 aa10.44□□□□□ -0.74
TRA2B-216ENST00000493864 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
TRA2B-216ENST00000493864 PARP9Q8IXQ6 854 aa10.44□□□□□ -0.74
TRA2B-216ENST00000493864 SHROOM2Q13796 1616 aa10.44□□□□□ -0.74
TRA2B-216ENST00000493864 KDM4CQ9H3R0 1056 aa10.43□□□□□ -0.74
TRA2B-216ENST00000493864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.42□□□□□ -0.74
TRA2B-216ENST00000493864 CLCN1P35523 988 aa10.42□□□□□ -0.74
TRA2B-216ENST00000493864 REPIN1Q9BWE0 567 aaKnown RBP10.42□□□□□ -0.74
TRA2B-216ENST00000493864 KIAA0586Q9BVV6 1533 aa10.42□□□□□ -0.74
TRA2B-216ENST00000493864 DNAJB2P25686 324 aa10.41□□□□□ -0.74
TRA2B-216ENST00000493864 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
TRA2B-216ENST00000493864 NBPF3Q9H094 633 aa10.41□□□□□ -0.74
TRA2B-216ENST00000493864 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
TRA2B-216ENST00000493864 CEP162Q5TB80 1403 aa10.41□□□□□ -0.74
TRA2B-216ENST00000493864 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
TRA2B-216ENST00000493864 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
TRA2B-216ENST00000493864 CTTNBP2Q8WZ74 1663 aa10.39□□□□□ -0.75
TRA2B-216ENST00000493864 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
TRA2B-216ENST00000493864 CDAN1Q8IWY9 1227 aa10.39□□□□□ -0.75
TRA2B-216ENST00000493864 CLIP1P30622 1438 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms