RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 NAIPQ13075 1403 aa21.48■■□□□ 1.03
ATG3-206ENST00000492886 RIMS2Q9UQ26 1411 aa21.48■■□□□ 1.03
ATG3-206ENST00000492886 NKTRP30414 1462 aaKnown RBP21.47■■□□□ 1.03
ATG3-206ENST00000492886 DISP3Q9P2K9 1392 aa21.47■■□□□ 1.03
ATG3-206ENST00000492886 KCNA6P17658 529 aa21.45■■□□□ 1.02
ATG3-206ENST00000492886 HSPA1LP34931 641 aa21.45■■□□□ 1.02
ATG3-206ENST00000492886 PIP4K2BP78356 416 aa21.44■■□□□ 1.02
ATG3-206ENST00000492886 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
ATG3-206ENST00000492886 SLC26A8Q96RN1 970 aa21.43■■□□□ 1.02
ATG3-206ENST00000492886 HFM1A2PYH4 1435 aa21.41■■□□□ 1.02
ATG3-206ENST00000492886 ADAMTS13Q76LX8 1427 aa21.41■■□□□ 1.02
ATG3-206ENST00000492886 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
ATG3-206ENST00000492886 CLTCL1P53675 1640 aa21.4■■□□□ 1.02
ATG3-206ENST00000492886 TRPM2O94759 1503 aa21.39■■□□□ 1.02
ATG3-206ENST00000492886 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
ATG3-206ENST00000492886 NRXN3Q9Y4C0 1643 aa21.39■■□□□ 1.01
ATG3-206ENST00000492886 MED1Q15648 1581 aaPredicted RBP21.39■■□□□ 1.01
ATG3-206ENST00000492886 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
ATG3-206ENST00000492886 ILDR2Q71H61 639 aa21.38■■□□□ 1.01
ATG3-206ENST00000492886 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.38■■□□□ 1.01
ATG3-206ENST00000492886 TBX22Q9Y458 520 aa21.37■■□□□ 1.01
ATG3-206ENST00000492886 KIF1BO60333 1816 aa21.36■■□□□ 1.01
ATG3-206ENST00000492886 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
ATG3-206ENST00000492886 PIK3R4Q99570 1358 aa21.35■■□□□ 1.01
ATG3-206ENST00000492886 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
ATG3-206ENST00000492886 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1.01
ATG3-206ENST00000492886 ROBO1Q9Y6N7 1651 aa21.33■■□□□ 1
ATG3-206ENST00000492886 NEXMIFQ5QGS0 1516 aa21.33■■□□□ 1
ATG3-206ENST00000492886 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
ATG3-206ENST00000492886 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
ATG3-206ENST00000492886 NCOA3Q9Y6Q9 1424 aa21.31■■□□□ 1
ATG3-206ENST00000492886 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
ATG3-206ENST00000492886 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
ATG3-206ENST00000492886 BCANQ96GW7 911 aa21.28■■□□□ 1
ATG3-206ENST00000492886 PTPRUQ92729 1446 aa21.28■■□□□ 1
ATG3-206ENST00000492886 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.27■■□□□ 1
ATG3-206ENST00000492886 RBM33Q96EV2 1170 aaKnown RBP21.27■■□□□ 1
ATG3-206ENST00000492886 SETD1AO15047 1707 aaKnown RBP21.26■□□□□ 0.99
ATG3-206ENST00000492886 MSH6P52701 1360 aa21.25■□□□□ 0.99
ATG3-206ENST00000492886 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
ATG3-206ENST00000492886 PPLO60437 1756 aa21.23■□□□□ 0.99
ATG3-206ENST00000492886 SOCS7O14512 581 aa21.2■□□□□ 0.98
ATG3-206ENST00000492886 PHLPP1O60346 1717 aa21.19■□□□□ 0.98
ATG3-206ENST00000492886 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
ATG3-206ENST00000492886 IFT172Q9UG01 1749 aa21.18■□□□□ 0.98
ATG3-206ENST00000492886 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
ATG3-206ENST00000492886 SLC4A1APQ9BWU0 796 aaKnown RBP21.17■□□□□ 0.98
ATG3-206ENST00000492886 SLAIN2Q9P270 581 aa21.17■□□□□ 0.98
ATG3-206ENST00000492886 AMOTL2Q9Y2J4 779 aa21.17■□□□□ 0.98
ATG3-206ENST00000492886 METP08581 1390 aa21.17■□□□□ 0.98
ATG3-206ENST00000492886 COL16A1Q07092 1604 aaPredicted RBP21.17■□□□□ 0.98
ATG3-206ENST00000492886 DCCP43146 1447 aa21.15■□□□□ 0.98
ATG3-206ENST00000492886 C19orf44Q9H6X5 657 aa21.14■□□□□ 0.97
ATG3-206ENST00000492886 NALCNQ8IZF0 1738 aa21.14■□□□□ 0.97
ATG3-206ENST00000492886 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
ATG3-206ENST00000492886 PRAG1Q86YV5 1406 aa21.13■□□□□ 0.97
ATG3-206ENST00000492886 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
ATG3-206ENST00000492886 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
ATG3-206ENST00000492886 SPATA31E1Q6ZUB1 1445 aa21.1■□□□□ 0.97
ATG3-206ENST00000492886 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
ATG3-206ENST00000492886 PTCH1Q13635 1447 aa21.08■□□□□ 0.97
ATG3-206ENST00000492886 NHSL1Q5SYE7 1610 aa21.07■□□□□ 0.96
ATG3-206ENST00000492886 ADGRL3Q9HAR2 1447 aa21.07■□□□□ 0.96
ATG3-206ENST00000492886 FOXD1Q16676 465 aa21.07■□□□□ 0.96
ATG3-206ENST00000492886 MPHOSPH9Q99550 1183 aa21.07■□□□□ 0.96
ATG3-206ENST00000492886 SHPRHQ149N8 1683 aa21.07■□□□□ 0.96
ATG3-206ENST00000492886 CCDC144AA2RUR9 1427 aa21.06■□□□□ 0.96
ATG3-206ENST00000492886 MST1RQ04912 1400 aa21.06■□□□□ 0.96
ATG3-206ENST00000492886 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
ATG3-206ENST00000492886 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
ATG3-206ENST00000492886 C14orf37Q86TY3 774 aa21.05■□□□□ 0.96
ATG3-206ENST00000492886 RGS17Q9UGC6 210 aaPredicted RBP21.05■□□□□ 0.96
ATG3-206ENST00000492886 ATF3P18847 181 aa21.04■□□□□ 0.96
ATG3-206ENST00000492886 ASXL1Q8IXJ9 1541 aa21.04■□□□□ 0.96
ATG3-206ENST00000492886 JCADQ9P266 1359 aa21.03■□□□□ 0.96
ATG3-206ENST00000492886 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
ATG3-206ENST00000492886 LAMC1P11047 1609 aa21.03■□□□□ 0.96
ATG3-206ENST00000492886 BRINP3Q76B58 766 aa21.01■□□□□ 0.95
ATG3-206ENST00000492886 KNDC1Q76NI1 1749 aa21.01■□□□□ 0.95
ATG3-206ENST00000492886 ROBO2Q9HCK4 1378 aa21■□□□□ 0.95
ATG3-206ENST00000492886 ADGRF5Q8IZF2 1346 aa20.98■□□□□ 0.95
ATG3-206ENST00000492886 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
ATG3-206ENST00000492886 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
ATG3-206ENST00000492886 LRP6O75581 1613 aa20.97■□□□□ 0.95
ATG3-206ENST00000492886 PIK3C2GO75747 1445 aa20.96■□□□□ 0.95
ATG3-206ENST00000492886 TECPR2O15040 1411 aa20.95■□□□□ 0.95
ATG3-206ENST00000492886 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
ATG3-206ENST00000492886 SPATA31A6Q5VVP1 1343 aa20.94■□□□□ 0.94
ATG3-206ENST00000492886 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
ATG3-206ENST00000492886 CDC42BPGQ6DT37 1551 aa20.93■□□□□ 0.94
ATG3-206ENST00000492886 MYOM2P54296 1465 aa20.92■□□□□ 0.94
ATG3-206ENST00000492886 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
ATG3-206ENST00000492886 LRPPRCP42704 1394 aaKnown RBP20.89■□□□□ 0.93
ATG3-206ENST00000492886 POTEAQ6S8J7 498 aa20.89■□□□□ 0.93
ATG3-206ENST00000492886 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
ATG3-206ENST00000492886 HRCP23327 699 aa20.87■□□□□ 0.93
ATG3-206ENST00000492886 FMN2Q9NZ56 1722 aa20.85■□□□□ 0.93
ATG3-206ENST00000492886 YTHDC2Q9H6S0 1430 aaKnown RBP20.84■□□□□ 0.93
ATG3-206ENST00000492886 C14orf93Q9H972 538 aaKnown RBP20.83■□□□□ 0.93
ATG3-206ENST00000492886 PNPLA6Q8IY17 1366 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms