RNA–Protein interactions for RNA: ENST00000492778.5

CRAMP1-207, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-207ENST00000492778 ADGRB3O60242 1522 aa13.37□□□□□ -0.27
CRAMP1-207ENST00000492778 RPRD2Q5VT52 1461 aaKnown RBP13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 ZNF326Q5BKZ1 582 aaKnown RBP13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 PROSER2Q86WR7 435 aaPredicted RBP13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 UNC13BO14795 1591 aa13.36□□□□□ -0.27
CRAMP1-207ENST00000492778 TET3O43151 1660 aa13.35□□□□□ -0.27
CRAMP1-207ENST00000492778 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
CRAMP1-207ENST00000492778 KCNA6P17658 529 aa13.34□□□□□ -0.27
CRAMP1-207ENST00000492778 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
CRAMP1-207ENST00000492778 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
CRAMP1-207ENST00000492778 E9PCH4 1651 aa13.32□□□□□ -0.28
CRAMP1-207ENST00000492778 NAIPQ13075 1403 aa13.31□□□□□ -0.28
CRAMP1-207ENST00000492778 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
CRAMP1-207ENST00000492778 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
CRAMP1-207ENST00000492778 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
CRAMP1-207ENST00000492778 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
CRAMP1-207ENST00000492778 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
CRAMP1-207ENST00000492778 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
CRAMP1-207ENST00000492778 FOXD1Q16676 465 aa13.3□□□□□ -0.28
CRAMP1-207ENST00000492778 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
CRAMP1-207ENST00000492778 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
CRAMP1-207ENST00000492778 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
CRAMP1-207ENST00000492778 KDM5AP29375 1690 aaKnown RBP13.26□□□□□ -0.29
CRAMP1-207ENST00000492778 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
CRAMP1-207ENST00000492778 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
CRAMP1-207ENST00000492778 HFM1A2PYH4 1435 aa13.24□□□□□ -0.29
CRAMP1-207ENST00000492778 MSH6P52701 1360 aa13.24□□□□□ -0.29
CRAMP1-207ENST00000492778 AMOTL2Q9Y2J4 779 aa13.24□□□□□ -0.29
CRAMP1-207ENST00000492778 ADAMTS13Q76LX8 1427 aa13.23□□□□□ -0.29
CRAMP1-207ENST00000492778 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
CRAMP1-207ENST00000492778 RGL3Q3MIN7 710 aa13.2□□□□□ -0.3
CRAMP1-207ENST00000492778 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
CRAMP1-207ENST00000492778 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
CRAMP1-207ENST00000492778 XIRP1Q702N8 1843 aaKnown RBP13.19□□□□□ -0.3
CRAMP1-207ENST00000492778 ATF3P18847 181 aa13.19□□□□□ -0.3
CRAMP1-207ENST00000492778 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
CRAMP1-207ENST00000492778 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
CRAMP1-207ENST00000492778 METP08581 1390 aa13.19□□□□□ -0.3
CRAMP1-207ENST00000492778 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
CRAMP1-207ENST00000492778 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
CRAMP1-207ENST00000492778 TRPM2O94759 1503 aa13.18□□□□□ -0.3
CRAMP1-207ENST00000492778 FAM135BQ49AJ0 1406 aa13.17□□□□□ -0.3
CRAMP1-207ENST00000492778 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
CRAMP1-207ENST00000492778 C19orf44Q9H6X5 657 aa13.16□□□□□ -0.3
CRAMP1-207ENST00000492778 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
CRAMP1-207ENST00000492778 PIK3R4Q99570 1358 aa13.15□□□□□ -0.3
CRAMP1-207ENST00000492778 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
CRAMP1-207ENST00000492778 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
CRAMP1-207ENST00000492778 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
CRAMP1-207ENST00000492778 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
CRAMP1-207ENST00000492778 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
CRAMP1-207ENST00000492778 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
CRAMP1-207ENST00000492778 STK26Q9P289 416 aa13.12□□□□□ -0.31
CRAMP1-207ENST00000492778 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
CRAMP1-207ENST00000492778 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
CRAMP1-207ENST00000492778 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
CRAMP1-207ENST00000492778 DDX17Q92841 729 aaKnown RBP13.1□□□□□ -0.31
CRAMP1-207ENST00000492778 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
CRAMP1-207ENST00000492778 RPGRIP1LQ68CZ1 1315 aa13.1□□□□□ -0.31
CRAMP1-207ENST00000492778 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
CRAMP1-207ENST00000492778 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
CRAMP1-207ENST00000492778 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
CRAMP1-207ENST00000492778 KIF1BO60333 1816 aa13.09□□□□□ -0.31
CRAMP1-207ENST00000492778 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
CRAMP1-207ENST00000492778 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
CRAMP1-207ENST00000492778 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
CRAMP1-207ENST00000492778 TMEM132EQ6IEE7 984 aa13.08□□□□□ -0.32
CRAMP1-207ENST00000492778 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
CRAMP1-207ENST00000492778 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
CRAMP1-207ENST00000492778 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.07□□□□□ -0.32
CRAMP1-207ENST00000492778 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
CRAMP1-207ENST00000492778 JCADQ9P266 1359 aa13.06□□□□□ -0.32
CRAMP1-207ENST00000492778 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
CRAMP1-207ENST00000492778 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
CRAMP1-207ENST00000492778 XRN1Q8IZH2 1706 aaKnown RBP13.04□□□□□ -0.32
CRAMP1-207ENST00000492778 LRP6O75581 1613 aa13.03□□□□□ -0.32
CRAMP1-207ENST00000492778 ORAI2Q96SN7 254 aa13.03□□□□□ -0.32
CRAMP1-207ENST00000492778 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
CRAMP1-207ENST00000492778 MST1RQ04912 1400 aa13.03□□□□□ -0.32
CRAMP1-207ENST00000492778 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
CRAMP1-207ENST00000492778 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
CRAMP1-207ENST00000492778 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
CRAMP1-207ENST00000492778 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
CRAMP1-207ENST00000492778 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
CRAMP1-207ENST00000492778 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
CRAMP1-207ENST00000492778 ASXL1Q8IXJ9 1541 aa13□□□□□ -0.33
CRAMP1-207ENST00000492778 DCCP43146 1447 aa13□□□□□ -0.33
CRAMP1-207ENST00000492778 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
CRAMP1-207ENST00000492778 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
CRAMP1-207ENST00000492778 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
CRAMP1-207ENST00000492778 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
CRAMP1-207ENST00000492778 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
CRAMP1-207ENST00000492778 PPLO60437 1756 aa12.99□□□□□ -0.33
CRAMP1-207ENST00000492778 C1orf167Q5SNV9 1468 aa12.98□□□□□ -0.33
CRAMP1-207ENST00000492778 SPATA31A6Q5VVP1 1343 aa12.98□□□□□ -0.33
CRAMP1-207ENST00000492778 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
CRAMP1-207ENST00000492778 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms