RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 SCAF1Q9H7N4 1312 aaKnown RBP26.82■■□□□ 1.88
ARPC1B-220ENST00000491294 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
ARPC1B-220ENST00000491294 KCNA6P17658 529 aa26.8■■□□□ 1.88
ARPC1B-220ENST00000491294 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.8■■□□□ 1.88
ARPC1B-220ENST00000491294 PLEKHG1Q9ULL1 1385 aa26.78■■□□□ 1.88
ARPC1B-220ENST00000491294 HFM1A2PYH4 1435 aa26.78■■□□□ 1.88
ARPC1B-220ENST00000491294 MYO5BQ9ULV0 1848 aa26.78■■□□□ 1.88
ARPC1B-220ENST00000491294 HSPA1LP34931 641 aa26.73■■□□□ 1.87
ARPC1B-220ENST00000491294 TRIM52Q96A61 297 aa26.73■■□□□ 1.87
ARPC1B-220ENST00000491294 ALKQ9UM73 1620 aa26.72■■□□□ 1.87
ARPC1B-220ENST00000491294 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
ARPC1B-220ENST00000491294 NUTM2DQ5VT03 806 aaPredicted RBP26.71■■□□□ 1.87
ARPC1B-220ENST00000491294 PROSER2Q86WR7 435 aaPredicted RBP26.71■■□□□ 1.87
ARPC1B-220ENST00000491294 TBX22Q9Y458 520 aa26.71■■□□□ 1.87
ARPC1B-220ENST00000491294 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
ARPC1B-220ENST00000491294 TMEM94Q12767 1356 aa26.7■■□□□ 1.86
ARPC1B-220ENST00000491294 SPHKAPQ2M3C7 1700 aa26.69■■□□□ 1.86
ARPC1B-220ENST00000491294 NKTRP30414 1462 aaKnown RBP26.66■■□□□ 1.86
ARPC1B-220ENST00000491294 NWD1Q149M9 1564 aa26.66■■□□□ 1.86
ARPC1B-220ENST00000491294 XIRP1Q702N8 1843 aaKnown RBP26.65■■□□□ 1.86
ARPC1B-220ENST00000491294 SLC4A1APQ9BWU0 796 aaKnown RBP26.64■■□□□ 1.86
ARPC1B-220ENST00000491294 ADAMTS13Q76LX8 1427 aa26.64■■□□□ 1.85
ARPC1B-220ENST00000491294 ZNF326Q5BKZ1 582 aaKnown RBP26.63■■□□□ 1.85
ARPC1B-220ENST00000491294 TRPM2O94759 1503 aa26.62■■□□□ 1.85
ARPC1B-220ENST00000491294 RBM33Q96EV2 1170 aaKnown RBP26.62■■□□□ 1.85
ARPC1B-220ENST00000491294 CHD2O14647 1828 aaKnown RBP26.6■■□□□ 1.85
ARPC1B-220ENST00000491294 PIK3R4Q99570 1358 aa26.59■■□□□ 1.85
ARPC1B-220ENST00000491294 DIP2AQ14689 1571 aa26.58■■□□□ 1.85
ARPC1B-220ENST00000491294 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
ARPC1B-220ENST00000491294 MSH6P52701 1360 aa26.56■■□□□ 1.84
ARPC1B-220ENST00000491294 FAM135BQ49AJ0 1406 aa26.55■■□□□ 1.84
ARPC1B-220ENST00000491294 NCOA3Q9Y6Q9 1424 aa26.52■■□□□ 1.84
ARPC1B-220ENST00000491294 AMOTL2Q9Y2J4 779 aa26.51■■□□□ 1.83
ARPC1B-220ENST00000491294 KIF1BO60333 1816 aa26.51■■□□□ 1.83
ARPC1B-220ENST00000491294 ACIN1Q9UKV3 1341 aaKnown RBP26.5■■□□□ 1.83
ARPC1B-220ENST00000491294 SETBP1Q9Y6X0 1596 aa26.5■■□□□ 1.83
ARPC1B-220ENST00000491294 ILDR2Q71H61 639 aa26.49■■□□□ 1.83
ARPC1B-220ENST00000491294 NEXMIFQ5QGS0 1516 aa26.49■■□□□ 1.83
ARPC1B-220ENST00000491294 FOXD1Q16676 465 aa26.48■■□□□ 1.83
ARPC1B-220ENST00000491294 MPHOSPH9Q99550 1183 aa26.48■■□□□ 1.83
ARPC1B-220ENST00000491294 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
ARPC1B-220ENST00000491294 RPGRIP1LQ68CZ1 1315 aa26.47■■□□□ 1.83
ARPC1B-220ENST00000491294 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
ARPC1B-220ENST00000491294 NRXN3Q9Y4C0 1643 aa26.47■■□□□ 1.83
ARPC1B-220ENST00000491294 VGFO15240 615 aaPredicted RBP26.46■■□□□ 1.83
ARPC1B-220ENST00000491294 SLAIN2Q9P270 581 aa26.46■■□□□ 1.83
ARPC1B-220ENST00000491294 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
ARPC1B-220ENST00000491294 C19orf44Q9H6X5 657 aa26.44■■□□□ 1.82
ARPC1B-220ENST00000491294 METP08581 1390 aa26.43■■□□□ 1.82
ARPC1B-220ENST00000491294 MED1Q15648 1581 aaPredicted RBP26.41■■□□□ 1.82
ARPC1B-220ENST00000491294 CADPS2Q86UW7 1296 aa26.41■■□□□ 1.82
ARPC1B-220ENST00000491294 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.82
ARPC1B-220ENST00000491294 ROBO1Q9Y6N7 1651 aa26.39■■□□□ 1.82
ARPC1B-220ENST00000491294 ATF3P18847 181 aa26.39■■□□□ 1.82
ARPC1B-220ENST00000491294 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
ARPC1B-220ENST00000491294 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
ARPC1B-220ENST00000491294 RAB3GAP2Q9H2M9 1393 aa26.33■■□□□ 1.8
ARPC1B-220ENST00000491294 RGL3Q3MIN7 710 aa26.32■■□□□ 1.8
ARPC1B-220ENST00000491294 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
ARPC1B-220ENST00000491294 SPATA31E1Q6ZUB1 1445 aa26.31■■□□□ 1.8
ARPC1B-220ENST00000491294 SOCS7O14512 581 aa26.3■■□□□ 1.8
ARPC1B-220ENST00000491294 PPLO60437 1756 aa26.3■■□□□ 1.8
ARPC1B-220ENST00000491294 DCCP43146 1447 aa26.3■■□□□ 1.8
ARPC1B-220ENST00000491294 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
ARPC1B-220ENST00000491294 ADGRF5Q8IZF2 1346 aa26.26■■□□□ 1.79
ARPC1B-220ENST00000491294 SETD1AO15047 1707 aaKnown RBP26.25■■□□□ 1.79
ARPC1B-220ENST00000491294 ADGRL3Q9HAR2 1447 aa26.24■■□□□ 1.79
ARPC1B-220ENST00000491294 PTCH1Q13635 1447 aa26.23■■□□□ 1.79
ARPC1B-220ENST00000491294 PHLPP1O60346 1717 aa26.23■■□□□ 1.79
ARPC1B-220ENST00000491294 HRCP23327 699 aa26.23■■□□□ 1.79
ARPC1B-220ENST00000491294 BRINP3Q76B58 766 aa26.22■■□□□ 1.79
ARPC1B-220ENST00000491294 ROBO2Q9HCK4 1378 aa26.21■■□□□ 1.79
ARPC1B-220ENST00000491294 JCADQ9P266 1359 aa26.21■■□□□ 1.79
ARPC1B-220ENST00000491294 PRAG1Q86YV5 1406 aa26.21■■□□□ 1.79
ARPC1B-220ENST00000491294 MST1RQ04912 1400 aa26.2■■□□□ 1.78
ARPC1B-220ENST00000491294 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
ARPC1B-220ENST00000491294 COL16A1Q07092 1604 aaPredicted RBP26.17■■□□□ 1.78
ARPC1B-220ENST00000491294 IFT172Q9UG01 1749 aa26.16■■□□□ 1.78
ARPC1B-220ENST00000491294 RGS17Q9UGC6 210 aaPredicted RBP26.14■■□□□ 1.78
ARPC1B-220ENST00000491294 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.77
ARPC1B-220ENST00000491294 PIK3C2GO75747 1445 aa26.14■■□□□ 1.77
ARPC1B-220ENST00000491294 ASXL1Q8IXJ9 1541 aa26.13■■□□□ 1.77
ARPC1B-220ENST00000491294 LRPPRCP42704 1394 aaKnown RBP26.11■■□□□ 1.77
ARPC1B-220ENST00000491294 STK26Q9P289 416 aa26.11■■□□□ 1.77
ARPC1B-220ENST00000491294 TMEM132EQ6IEE7 984 aa26.1■■□□□ 1.77
ARPC1B-220ENST00000491294 SPATA31A6Q5VVP1 1343 aa26.1■■□□□ 1.77
ARPC1B-220ENST00000491294 C14orf93Q9H972 538 aaKnown RBP26.09■■□□□ 1.77
ARPC1B-220ENST00000491294 C1orf167Q5SNV9 1468 aa26.09■■□□□ 1.77
ARPC1B-220ENST00000491294 ABCC11Q96J66 1382 aa26.08■■□□□ 1.77
ARPC1B-220ENST00000491294 TECPR2O15040 1411 aa26.08■■□□□ 1.77
ARPC1B-220ENST00000491294 MYOM2P54296 1465 aa26.07■■□□□ 1.76
ARPC1B-220ENST00000491294 NRXN1Q9ULB1 1477 aa26.06■■□□□ 1.76
ARPC1B-220ENST00000491294 WAPLQ7Z5K2 1190 aa26.05■■□□□ 1.76
ARPC1B-220ENST00000491294 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
ARPC1B-220ENST00000491294 CFAP70Q5T0N1 1121 aa26.04■■□□□ 1.76
ARPC1B-220ENST00000491294 YTHDC2Q9H6S0 1430 aaKnown RBP26.04■■□□□ 1.76
ARPC1B-220ENST00000491294 DDX17Q92841 729 aaKnown RBP26.03■■□□□ 1.76
ARPC1B-220ENST00000491294 NHSL1Q5SYE7 1610 aa26.03■■□□□ 1.76
ARPC1B-220ENST00000491294 SIRT1Q96EB6 747 aa26.02■■□□□ 1.76
ARPC1B-220ENST00000491294 ORAI2Q96SN7 254 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms