RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ZFYVE16Q7Z3T8 1539 aa20.74■□□□□ 0.91
BRD9-208ENST00000489816 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
BRD9-208ENST00000489816 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
BRD9-208ENST00000489816 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
BRD9-208ENST00000489816 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
BRD9-208ENST00000489816 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
BRD9-208ENST00000489816 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
BRD9-208ENST00000489816 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
BRD9-208ENST00000489816 ASXL2Q76L83 1435 aa20.72■□□□□ 0.91
BRD9-208ENST00000489816 CLTCL1P53675 1640 aa20.71■□□□□ 0.91
BRD9-208ENST00000489816 SCAF11Q99590 1463 aaKnown RBP20.71■□□□□ 0.91
BRD9-208ENST00000489816 SLC12A5Q9H2X9 1139 aa20.71■□□□□ 0.91
BRD9-208ENST00000489816 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
BRD9-208ENST00000489816 EIF2AK4Q9P2K8 1649 aaKnown RBP20.69■□□□□ 0.9
BRD9-208ENST00000489816 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
BRD9-208ENST00000489816 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
BRD9-208ENST00000489816 DMRT2Q9Y5R5 561 aa20.68■□□□□ 0.9
BRD9-208ENST00000489816 RTEL1-TNFRSF6BF6WH68 1400 aa20.68■□□□□ 0.9
BRD9-208ENST00000489816 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
BRD9-208ENST00000489816 DUSP27Q5VZP5 1158 aa20.67■□□□□ 0.9
BRD9-208ENST00000489816 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
BRD9-208ENST00000489816 PTPRTO14522 1441 aa20.66■□□□□ 0.9
BRD9-208ENST00000489816 PDE4AP27815 886 aa20.66■□□□□ 0.9
BRD9-208ENST00000489816 TRPM2O94759 1503 aa20.65■□□□□ 0.9
BRD9-208ENST00000489816 BLMP54132 1417 aaPredicted RBP20.65■□□□□ 0.9
BRD9-208ENST00000489816 BCAR3O75815 825 aa20.64■□□□□ 0.89
BRD9-208ENST00000489816 STK26Q9P289 416 aa20.64■□□□□ 0.89
BRD9-208ENST00000489816 ZBTB47Q9UFB7 747 aaPredicted RBP20.64■□□□□ 0.89
BRD9-208ENST00000489816 NOS1P29475 1434 aa20.64■□□□□ 0.89
BRD9-208ENST00000489816 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
BRD9-208ENST00000489816 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
BRD9-208ENST00000489816 SPHKAPQ2M3C7 1700 aa20.62■□□□□ 0.89
BRD9-208ENST00000489816 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
BRD9-208ENST00000489816 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
BRD9-208ENST00000489816 MORC1Q86VD1 984 aa20.59■□□□□ 0.89
BRD9-208ENST00000489816 RGS3P49796 1198 aa20.59■□□□□ 0.89
BRD9-208ENST00000489816 LAMC1P11047 1609 aa20.58■□□□□ 0.89
BRD9-208ENST00000489816 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.89
BRD9-208ENST00000489816 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
BRD9-208ENST00000489816 RNF17Q9BXT8 1623 aaKnown RBP20.58■□□□□ 0.88
BRD9-208ENST00000489816 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.88
BRD9-208ENST00000489816 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
BRD9-208ENST00000489816 CD109Q6YHK3 1445 aa20.56■□□□□ 0.88
BRD9-208ENST00000489816 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
BRD9-208ENST00000489816 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
BRD9-208ENST00000489816 ZMYM4Q5VZL5 1548 aa20.55■□□□□ 0.88
BRD9-208ENST00000489816 STAC3Q96MF2 364 aa20.55■□□□□ 0.88
BRD9-208ENST00000489816 IQGAP1P46940 1657 aa20.55■□□□□ 0.88
BRD9-208ENST00000489816 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
BRD9-208ENST00000489816 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
BRD9-208ENST00000489816 BACH2Q9BYV9 841 aa20.54■□□□□ 0.88
BRD9-208ENST00000489816 TET3O43151 1660 aa20.54■□□□□ 0.88
BRD9-208ENST00000489816 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
BRD9-208ENST00000489816 CEP152O94986 1710 aa20.53■□□□□ 0.88
BRD9-208ENST00000489816 ZNF521Q96K83 1311 aa20.53■□□□□ 0.88
BRD9-208ENST00000489816 INO80Q9ULG1 1556 aaPredicted RBP20.52■□□□□ 0.88
BRD9-208ENST00000489816 MTHFSP49914 203 aa20.52■□□□□ 0.87
BRD9-208ENST00000489816 NPATQ14207 1427 aa20.52■□□□□ 0.87
BRD9-208ENST00000489816 NSD3Q9BZ95 1437 aa20.51■□□□□ 0.87
BRD9-208ENST00000489816 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
BRD9-208ENST00000489816 ABCA9Q8IUA7 1624 aa20.51■□□□□ 0.87
BRD9-208ENST00000489816 C14orf93Q9H972 538 aaKnown RBP20.5■□□□□ 0.87
BRD9-208ENST00000489816 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
BRD9-208ENST00000489816 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
BRD9-208ENST00000489816 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
BRD9-208ENST00000489816 IDI1Q13907 227 aa20.48■□□□□ 0.87
BRD9-208ENST00000489816 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
BRD9-208ENST00000489816 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
BRD9-208ENST00000489816 DEPDC5O75140 1603 aa20.48■□□□□ 0.87
BRD9-208ENST00000489816 DEKP35659 375 aaKnown RBP20.48■□□□□ 0.87
BRD9-208ENST00000489816 COG6Q9Y2V7 657 aa20.47■□□□□ 0.87
BRD9-208ENST00000489816 SYNMO15061 1565 aa20.47■□□□□ 0.87
BRD9-208ENST00000489816 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
BRD9-208ENST00000489816 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
BRD9-208ENST00000489816 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.47■□□□□ 0.87
BRD9-208ENST00000489816 PPRC1Q5VV67 1664 aaKnown RBP20.47■□□□□ 0.87
BRD9-208ENST00000489816 SRPK2P78362 688 aaKnown RBP20.46■□□□□ 0.87
BRD9-208ENST00000489816 CLUAP1Q96AJ1 413 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 TCP11L2Q8N4U5 519 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 PIK3C2GO75747 1445 aa20.46■□□□□ 0.87
BRD9-208ENST00000489816 MROH2AA6NES4 1674 aa20.45■□□□□ 0.86
BRD9-208ENST00000489816 FBXO31Q5XUX0 539 aaPredicted RBP20.45■□□□□ 0.86
BRD9-208ENST00000489816 VWDEQ8N2E2 1590 aa20.45■□□□□ 0.86
BRD9-208ENST00000489816 MINK1Q8N4C8 1332 aaPredicted RBP20.45■□□□□ 0.86
BRD9-208ENST00000489816 MYOM1P52179 1685 aa20.44■□□□□ 0.86
BRD9-208ENST00000489816 EFCAB6Q5THR3 1501 aa20.44■□□□□ 0.86
BRD9-208ENST00000489816 U2AF1L5P0DN76 240 aaPredicted RBP20.44■□□□□ 0.86
BRD9-208ENST00000489816 U2AF1Q01081 240 aaKnown RBP eCLIP20.44■□□□□ 0.86
BRD9-208ENST00000489816 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
BRD9-208ENST00000489816 E9PSI1 815 aa20.43■□□□□ 0.86
BRD9-208ENST00000489816 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
BRD9-208ENST00000489816 KIF1BO60333 1816 aa20.43■□□□□ 0.86
BRD9-208ENST00000489816 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
BRD9-208ENST00000489816 FBLN1P23142 703 aa20.42■□□□□ 0.86
BRD9-208ENST00000489816 MLECQ14165 292 aa20.42■□□□□ 0.86
BRD9-208ENST00000489816 IGHDP01880 384 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms