RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 PPP4CP60510 307 aa10.65□□□□□ -0.7
RAB4A-204ENST00000489342 TSR3Q9UJK0 312 aaKnown RBP10.65□□□□□ -0.7
RAB4A-204ENST00000489342 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
RAB4A-204ENST00000489342 CCDC180Q9P1Z9 1646 aa10.64□□□□□ -0.71
RAB4A-204ENST00000489342 IRF6O14896 467 aa10.63□□□□□ -0.71
RAB4A-204ENST00000489342 ZMYND10O75800 440 aa10.63□□□□□ -0.71
RAB4A-204ENST00000489342 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
RAB4A-204ENST00000489342 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
RAB4A-204ENST00000489342 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
RAB4A-204ENST00000489342 CCDC102AQ96A19 550 aa10.61□□□□□ -0.71
RAB4A-204ENST00000489342 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
RAB4A-204ENST00000489342 NYAP1Q6ZVC0 841 aa10.59□□□□□ -0.71
RAB4A-204ENST00000489342 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
RAB4A-204ENST00000489342 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
RAB4A-204ENST00000489342 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
RAB4A-204ENST00000489342 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
RAB4A-204ENST00000489342 RDH13Q8NBN7 331 aa10.54□□□□□ -0.72
RAB4A-204ENST00000489342 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
RAB4A-204ENST00000489342 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
RAB4A-204ENST00000489342 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
RAB4A-204ENST00000489342 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
RAB4A-204ENST00000489342 AK7Q96M32 723 aa10.52□□□□□ -0.73
RAB4A-204ENST00000489342 PRR14Q9BWN1 585 aa10.52□□□□□ -0.73
RAB4A-204ENST00000489342 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
RAB4A-204ENST00000489342 CLCN1P35523 988 aa10.5□□□□□ -0.73
RAB4A-204ENST00000489342 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
RAB4A-204ENST00000489342 CFHP08603 1231 aa10.49□□□□□ -0.73
RAB4A-204ENST00000489342 GPCPD1Q9NPB8 672 aa10.49□□□□□ -0.73
RAB4A-204ENST00000489342 PLA2G2EQ9NZK7 142 aa10.49□□□□□ -0.73
RAB4A-204ENST00000489342 SLC10A3P09131 477 aa10.48□□□□□ -0.73
RAB4A-204ENST00000489342 APLP1P51693 650 aa10.48□□□□□ -0.73
RAB4A-204ENST00000489342 TRIM66O15016 1216 aa10.45□□□□□ -0.74
RAB4A-204ENST00000489342 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
RAB4A-204ENST00000489342 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
RAB4A-204ENST00000489342 COPS2P61201 443 aa10.43□□□□□ -0.74
RAB4A-204ENST00000489342 KCNC4Q03721 635 aa10.43□□□□□ -0.74
RAB4A-204ENST00000489342 AMHR2Q16671 573 aa10.43□□□□□ -0.74
RAB4A-204ENST00000489342 TPRNQ4KMQ1 711 aa10.43□□□□□ -0.74
RAB4A-204ENST00000489342 MTRQ99707 1265 aa10.42□□□□□ -0.74
RAB4A-204ENST00000489342 IL21Q9HBE4 155 aa10.42□□□□□ -0.74
RAB4A-204ENST00000489342 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
RAB4A-204ENST00000489342 CD46P15529 392 aa10.4□□□□□ -0.74
RAB4A-204ENST00000489342 GCGRP47871 477 aa10.4□□□□□ -0.74
RAB4A-204ENST00000489342 FAM217BQ9NTX9 383 aaPredicted RBP10.4□□□□□ -0.74
RAB4A-204ENST00000489342 SSTR3P32745 418 aaPredicted RBP10.39□□□□□ -0.75
RAB4A-204ENST00000489342 PDE4DQ08499 809 aa10.39□□□□□ -0.75
RAB4A-204ENST00000489342 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
RAB4A-204ENST00000489342 REPIN1Q9BWE0 567 aaKnown RBP10.39□□□□□ -0.75
RAB4A-204ENST00000489342 BLOC1S3Q6QNY0 202 aa10.38□□□□□ -0.75
RAB4A-204ENST00000489342 GRIPAP1Q4V328 841 aa10.37□□□□□ -0.75
RAB4A-204ENST00000489342 TJAP1Q5JTD0 557 aa10.37□□□□□ -0.75
RAB4A-204ENST00000489342 PARP9Q8IXQ6 854 aa10.37□□□□□ -0.75
RAB4A-204ENST00000489342 RB1CC1Q8TDY2 1594 aa10.37□□□□□ -0.75
RAB4A-204ENST00000489342 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
RAB4A-204ENST00000489342 FUT2Q10981 343 aa10.36□□□□□ -0.75
RAB4A-204ENST00000489342 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
RAB4A-204ENST00000489342 NUTM1Q86Y26 1132 aa10.36□□□□□ -0.75
RAB4A-204ENST00000489342 NR1I2O75469 434 aa10.35□□□□□ -0.75
RAB4A-204ENST00000489342 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
RAB4A-204ENST00000489342 KDM4AO75164 1064 aa10.34□□□□□ -0.75
RAB4A-204ENST00000489342 ZNF516Q92618 1163 aa10.34□□□□□ -0.75
RAB4A-204ENST00000489342 ZPR1O75312 459 aa10.33□□□□□ -0.76
RAB4A-204ENST00000489342 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
RAB4A-204ENST00000489342 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
RAB4A-204ENST00000489342 USP46P62068 366 aa10.3□□□□□ -0.76
RAB4A-204ENST00000489342 MORN1Q5T089 497 aa10.29□□□□□ -0.76
RAB4A-204ENST00000489342 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
RAB4A-204ENST00000489342 TLL1O43897 1013 aa10.28□□□□□ -0.76
RAB4A-204ENST00000489342 MS4A1P11836 297 aa10.28□□□□□ -0.76
RAB4A-204ENST00000489342 A0A0G2JS52 829 aa10.27□□□□□ -0.77
RAB4A-204ENST00000489342 GGCXP38435 758 aa10.27□□□□□ -0.77
RAB4A-204ENST00000489342 NKX2-3Q8TAU0 364 aa10.27□□□□□ -0.77
RAB4A-204ENST00000489342 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
RAB4A-204ENST00000489342 HOXA2O43364 376 aa10.26□□□□□ -0.77
RAB4A-204ENST00000489342 DIXDC1Q155Q3 683 aa10.26□□□□□ -0.77
RAB4A-204ENST00000489342 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
RAB4A-204ENST00000489342 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
RAB4A-204ENST00000489342 SPSB2Q99619 263 aa10.25□□□□□ -0.77
RAB4A-204ENST00000489342 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
RAB4A-204ENST00000489342 ADH1BP00325 375 aa10.24□□□□□ -0.77
RAB4A-204ENST00000489342 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
RAB4A-204ENST00000489342 Q3C1V9 767 aa10.24□□□□□ -0.77
RAB4A-204ENST00000489342 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
RAB4A-204ENST00000489342 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
RAB4A-204ENST00000489342 HLA-CQ95604 372 aa10.23□□□□□ -0.77
RAB4A-204ENST00000489342 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
RAB4A-204ENST00000489342 PPP1R18Q6NYC8 613 aa10.22□□□□□ -0.77
RAB4A-204ENST00000489342 TBC1D2Q9BYX2 928 aa10.22□□□□□ -0.77
RAB4A-204ENST00000489342 FDX1P10109 184 aa10.21□□□□□ -0.77
RAB4A-204ENST00000489342 SLC6A16Q9GZN6 736 aa10.21□□□□□ -0.77
RAB4A-204ENST00000489342 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.77
RAB4A-204ENST00000489342 NDUFV2P19404 249 aa10.2□□□□□ -0.78
RAB4A-204ENST00000489342 RNF19BQ6ZMZ0 732 aa10.2□□□□□ -0.78
RAB4A-204ENST00000489342 MOXD2PA6NHM9 499 aa10.19□□□□□ -0.78
RAB4A-204ENST00000489342 S1PR4O95977 384 aa10.19□□□□□ -0.78
RAB4A-204ENST00000489342 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
RAB4A-204ENST00000489342 NACADO15069 1562 aa10.18□□□□□ -0.78
RAB4A-204ENST00000489342 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
RAB4A-204ENST00000489342 THAP11Q96EK4 314 aa10.18□□□□□ -0.78
RAB4A-204ENST00000489342 DDRGK1Q96HY6 314 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms