RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 UNC13BO14795 1591 aa20.36■□□□□ 0.85
LMO4-203ENST00000489303 GCC2Q8IWJ2 1684 aa20.33■□□□□ 0.85
LMO4-203ENST00000489303 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
LMO4-203ENST00000489303 E9PCH4 1651 aa20.32■□□□□ 0.84
LMO4-203ENST00000489303 ZFYVE9O95405 1425 aa20.31■□□□□ 0.84
LMO4-203ENST00000489303 KCNA6P17658 529 aa20.31■□□□□ 0.84
LMO4-203ENST00000489303 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
LMO4-203ENST00000489303 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
LMO4-203ENST00000489303 BCANQ96GW7 911 aa20.3■□□□□ 0.84
LMO4-203ENST00000489303 NAIPQ13075 1403 aa20.29■□□□□ 0.84
LMO4-203ENST00000489303 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
LMO4-203ENST00000489303 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
LMO4-203ENST00000489303 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
LMO4-203ENST00000489303 HFM1A2PYH4 1435 aa20.27■□□□□ 0.84
LMO4-203ENST00000489303 CHGAP10645 457 aaKnown RBP20.27■□□□□ 0.84
LMO4-203ENST00000489303 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
LMO4-203ENST00000489303 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
LMO4-203ENST00000489303 HDGFP51858 240 aaKnown RBP20.24■□□□□ 0.83
LMO4-203ENST00000489303 PLEKHG1Q9ULL1 1385 aa20.23■□□□□ 0.83
LMO4-203ENST00000489303 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
LMO4-203ENST00000489303 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
LMO4-203ENST00000489303 ROBO1Q9Y6N7 1651 aa20.22■□□□□ 0.83
LMO4-203ENST00000489303 FAM135BQ49AJ0 1406 aa20.21■□□□□ 0.83
LMO4-203ENST00000489303 CHD2O14647 1828 aaKnown RBP20.21■□□□□ 0.83
LMO4-203ENST00000489303 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
LMO4-203ENST00000489303 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
LMO4-203ENST00000489303 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
LMO4-203ENST00000489303 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
LMO4-203ENST00000489303 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
LMO4-203ENST00000489303 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
LMO4-203ENST00000489303 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
LMO4-203ENST00000489303 MSH6P52701 1360 aa20.14■□□□□ 0.81
LMO4-203ENST00000489303 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
LMO4-203ENST00000489303 SLAIN2Q9P270 581 aa20.13■□□□□ 0.81
LMO4-203ENST00000489303 SPHKAPQ2M3C7 1700 aa20.1■□□□□ 0.81
LMO4-203ENST00000489303 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
LMO4-203ENST00000489303 ZNF326Q5BKZ1 582 aaKnown RBP20.09■□□□□ 0.81
LMO4-203ENST00000489303 PHLPP1O60346 1717 aa20.08■□□□□ 0.81
LMO4-203ENST00000489303 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.07■□□□□ 0.8
LMO4-203ENST00000489303 POTEAQ6S8J7 498 aa20.07■□□□□ 0.8
LMO4-203ENST00000489303 C14orf37Q86TY3 774 aa20.07■□□□□ 0.8
LMO4-203ENST00000489303 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
LMO4-203ENST00000489303 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
LMO4-203ENST00000489303 CLTCL1P53675 1640 aa20.06■□□□□ 0.8
LMO4-203ENST00000489303 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
LMO4-203ENST00000489303 TRPM2O94759 1503 aa20.05■□□□□ 0.8
LMO4-203ENST00000489303 MPHOSPH9Q99550 1183 aa20.04■□□□□ 0.8
LMO4-203ENST00000489303 COL16A1Q07092 1604 aaPredicted RBP20.03■□□□□ 0.8
LMO4-203ENST00000489303 METP08581 1390 aa20.03■□□□□ 0.8
LMO4-203ENST00000489303 PIK3R4Q99570 1358 aa20.02■□□□□ 0.8
LMO4-203ENST00000489303 SETBP1Q9Y6X0 1596 aa20.01■□□□□ 0.79
LMO4-203ENST00000489303 C19orf44Q9H6X5 657 aa20.01■□□□□ 0.79
LMO4-203ENST00000489303 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
LMO4-203ENST00000489303 NCOA3Q9Y6Q9 1424 aa20.01■□□□□ 0.79
LMO4-203ENST00000489303 NEXMIFQ5QGS0 1516 aa20■□□□□ 0.79
LMO4-203ENST00000489303 FOXD1Q16676 465 aa19.99■□□□□ 0.79
LMO4-203ENST00000489303 JCADQ9P266 1359 aa19.98■□□□□ 0.79
LMO4-203ENST00000489303 ATF3P18847 181 aa19.98■□□□□ 0.79
LMO4-203ENST00000489303 LRP6O75581 1613 aa19.98■□□□□ 0.79
LMO4-203ENST00000489303 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
LMO4-203ENST00000489303 CADPS2Q86UW7 1296 aa19.97■□□□□ 0.79
LMO4-203ENST00000489303 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
LMO4-203ENST00000489303 RPGRIP1LQ68CZ1 1315 aa19.96■□□□□ 0.79
LMO4-203ENST00000489303 CCDC144AA2RUR9 1427 aa19.95■□□□□ 0.78
LMO4-203ENST00000489303 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
LMO4-203ENST00000489303 VGFO15240 615 aaPredicted RBP19.94■□□□□ 0.78
LMO4-203ENST00000489303 KIF1BO60333 1816 aa19.93■□□□□ 0.78
LMO4-203ENST00000489303 HRCP23327 699 aa19.92■□□□□ 0.78
LMO4-203ENST00000489303 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
LMO4-203ENST00000489303 SETD1AO15047 1707 aaKnown RBP19.92■□□□□ 0.78
LMO4-203ENST00000489303 MST1RQ04912 1400 aa19.92■□□□□ 0.78
LMO4-203ENST00000489303 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
LMO4-203ENST00000489303 ASXL1Q8IXJ9 1541 aa19.89■□□□□ 0.77
LMO4-203ENST00000489303 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
LMO4-203ENST00000489303 DCCP43146 1447 aa19.87■□□□□ 0.77
LMO4-203ENST00000489303 RGL3Q3MIN7 710 aa19.87■□□□□ 0.77
LMO4-203ENST00000489303 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
LMO4-203ENST00000489303 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
LMO4-203ENST00000489303 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
LMO4-203ENST00000489303 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
LMO4-203ENST00000489303 ROBO2Q9HCK4 1378 aa19.85■□□□□ 0.77
LMO4-203ENST00000489303 SPATA31A6Q5VVP1 1343 aa19.85■□□□□ 0.77
LMO4-203ENST00000489303 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
LMO4-203ENST00000489303 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
LMO4-203ENST00000489303 PPLO60437 1756 aa19.83■□□□□ 0.77
LMO4-203ENST00000489303 ANKRD30BQ9BXX2 1392 aa19.82■□□□□ 0.76
LMO4-203ENST00000489303 SPATA31E1Q6ZUB1 1445 aa19.81■□□□□ 0.76
LMO4-203ENST00000489303 ADGRF5Q8IZF2 1346 aa19.79■□□□□ 0.76
LMO4-203ENST00000489303 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
LMO4-203ENST00000489303 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
LMO4-203ENST00000489303 PTCH1Q13635 1447 aa19.77■□□□□ 0.76
LMO4-203ENST00000489303 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
LMO4-203ENST00000489303 LRRC59Q96AG4 307 aaKnown RBP19.75■□□□□ 0.75
LMO4-203ENST00000489303 AFF2P51816 1311 aa19.75■□□□□ 0.75
LMO4-203ENST00000489303 ZNF772Q68DY9 489 aaPredicted RBP19.74■□□□□ 0.75
LMO4-203ENST00000489303 TMEM132EQ6IEE7 984 aa19.72■□□□□ 0.75
LMO4-203ENST00000489303 STK26Q9P289 416 aa19.72■□□□□ 0.75
LMO4-203ENST00000489303 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
LMO4-203ENST00000489303 PRAG1Q86YV5 1406 aa19.71■□□□□ 0.75
LMO4-203ENST00000489303 WAPLQ7Z5K2 1190 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms