RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 KIF7Q2M1P5 1343 aa28.05■■■□□ 2.08
ATP1A1-208ENST00000488733 NBPF1Q3BBV0 1214 aa28.04■■■□□ 2.08
ATP1A1-208ENST00000488733 MYOM2P54296 1465 aa28.03■■■□□ 2.08
ATP1A1-208ENST00000488733 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
ATP1A1-208ENST00000488733 TNRQ92752 1358 aa28.01■■■□□ 2.07
ATP1A1-208ENST00000488733 ST20-MTHFSA0A0A6YYL1 179 aa28.01■■■□□ 2.07
ATP1A1-208ENST00000488733 IFT172Q9UG01 1749 aa28■■■□□ 2.07
ATP1A1-208ENST00000488733 RPGRIP1LQ68CZ1 1315 aa27.99■■■□□ 2.07
ATP1A1-208ENST00000488733 TMEM131LA2VDJ0 1609 aa27.99■■■□□ 2.07
ATP1A1-208ENST00000488733 C3P01024 1663 aa27.99■■■□□ 2.07
ATP1A1-208ENST00000488733 KIAA1210Q9ULL0 1709 aa27.98■■■□□ 2.07
ATP1A1-208ENST00000488733 CEBPAP49715 358 aaPredicted RBP27.98■■■□□ 2.07
ATP1A1-208ENST00000488733 ADAMTSL3P82987 1691 aa27.97■■■□□ 2.07
ATP1A1-208ENST00000488733 CCER2I3L3R5 266 aa27.96■■■□□ 2.07
ATP1A1-208ENST00000488733 PPLO60437 1756 aa27.94■■■□□ 2.06
ATP1A1-208ENST00000488733 STAG3Q9UJ98 1225 aa27.94■■■□□ 2.06
ATP1A1-208ENST00000488733 RIMS1Q86UR5 1692 aaKnown RBP27.93■■■□□ 2.06
ATP1A1-208ENST00000488733 NEXMIFQ5QGS0 1516 aa27.93■■■□□ 2.06
ATP1A1-208ENST00000488733 NRXN1Q9ULB1 1477 aa27.93■■■□□ 2.06
ATP1A1-208ENST00000488733 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
ATP1A1-208ENST00000488733 MYO5BQ9ULV0 1848 aa27.91■■■□□ 2.06
ATP1A1-208ENST00000488733 YTHDC1Q96MU7 727 aaKnown RBP27.91■■■□□ 2.06
ATP1A1-208ENST00000488733 A2ML1A8K2U0 1454 aa27.91■■■□□ 2.06
ATP1A1-208ENST00000488733 PLPPR3Q6T4P5 718 aa27.89■■■□□ 2.06
ATP1A1-208ENST00000488733 NLRP1Q9C000 1473 aa27.89■■■□□ 2.06
ATP1A1-208ENST00000488733 IQGAP1P46940 1657 aa27.86■■■□□ 2.05
ATP1A1-208ENST00000488733 VGFO15240 615 aaPredicted RBP27.86■■■□□ 2.05
ATP1A1-208ENST00000488733 SCAF11Q99590 1463 aaKnown RBP27.86■■■□□ 2.05
ATP1A1-208ENST00000488733 PIK3C2GO75747 1445 aa27.86■■■□□ 2.05
ATP1A1-208ENST00000488733 ZFYVE9O95405 1425 aa27.85■■■□□ 2.05
ATP1A1-208ENST00000488733 KDM5AP29375 1690 aaKnown RBP27.83■■■□□ 2.05
ATP1A1-208ENST00000488733 NUTM2DQ5VT03 806 aaPredicted RBP27.83■■■□□ 2.05
ATP1A1-208ENST00000488733 TESK2Q96S53 571 aa27.82■■■□□ 2.04
ATP1A1-208ENST00000488733 POLR3GLQ9BT43 218 aa27.81■■■□□ 2.04
ATP1A1-208ENST00000488733 EIF3AQ14152 1382 aaKnown RBP27.81■■■□□ 2.04
ATP1A1-208ENST00000488733 CFAP70Q5T0N1 1121 aa27.8■■■□□ 2.04
ATP1A1-208ENST00000488733 RIMS2Q9UQ26 1411 aa27.8■■■□□ 2.04
ATP1A1-208ENST00000488733 UBR1Q8IWV7 1749 aa27.79■■■□□ 2.04
ATP1A1-208ENST00000488733 TMF1P82094 1093 aa27.78■■■□□ 2.04
ATP1A1-208ENST00000488733 SETBP1Q9Y6X0 1596 aa27.78■■■□□ 2.04
ATP1A1-208ENST00000488733 SLC24A1O60721 1099 aa27.77■■■□□ 2.04
ATP1A1-208ENST00000488733 MYO3AQ8NEV4 1616 aa27.77■■■□□ 2.04
ATP1A1-208ENST00000488733 C14orf93Q9H972 538 aaKnown RBP27.76■■■□□ 2.03
ATP1A1-208ENST00000488733 PRKRIP1Q9H875 184 aaPredicted RBP27.75■■■□□ 2.03
ATP1A1-208ENST00000488733 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
ATP1A1-208ENST00000488733 PTPRMP28827 1452 aa27.73■■■□□ 2.03
ATP1A1-208ENST00000488733 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.72■■■□□ 2.03
ATP1A1-208ENST00000488733 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.03
ATP1A1-208ENST00000488733 CDCA8Q53HL2 280 aa27.7■■■□□ 2.03
ATP1A1-208ENST00000488733 HDGFP51858 240 aaKnown RBP27.7■■■□□ 2.02
ATP1A1-208ENST00000488733 ADGRB1O14514 1584 aa27.68■■■□□ 2.02
ATP1A1-208ENST00000488733 CEP170BQ9Y4F5 1589 aaPredicted RBP27.68■■■□□ 2.02
ATP1A1-208ENST00000488733 THEMISQ8N1K5 641 aaPredicted RBP27.65■■■□□ 2.02
ATP1A1-208ENST00000488733 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
ATP1A1-208ENST00000488733 SLIT1O75093 1534 aa27.64■■■□□ 2.02
ATP1A1-208ENST00000488733 ARHGAP23Q9P227 1491 aa27.63■■■□□ 2.01
ATP1A1-208ENST00000488733 TMEM132EQ6IEE7 984 aa27.62■■■□□ 2.01
ATP1A1-208ENST00000488733 ALKQ9UM73 1620 aa27.62■■■□□ 2.01
ATP1A1-208ENST00000488733 ZNF142P52746 1687 aaPredicted RBP27.61■■■□□ 2.01
ATP1A1-208ENST00000488733 SETD1BQ9UPS6 1966 aaKnown RBP27.61■■■□□ 2.01
ATP1A1-208ENST00000488733 KTN1Q86UP2 1357 aaKnown RBP27.61■■■□□ 2.01
ATP1A1-208ENST00000488733 SBNO2Q9Y2G9 1366 aa27.61■■■□□ 2.01
ATP1A1-208ENST00000488733 ASXL1Q8IXJ9 1541 aa27.59■■■□□ 2.01
ATP1A1-208ENST00000488733 EID1Q9Y6B2 187 aa27.58■■■□□ 2.01
ATP1A1-208ENST00000488733 LTKP29376 864 aa27.58■■■□□ 2.01
ATP1A1-208ENST00000488733 TXNDC2Q86VQ3 553 aa27.58■■■□□ 2.01
ATP1A1-208ENST00000488733 NRXN3Q9Y4C0 1643 aa27.57■■■□□ 2
ATP1A1-208ENST00000488733 CENPJQ9HC77 1338 aaPredicted RBP27.56■■■□□ 2
ATP1A1-208ENST00000488733 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
ATP1A1-208ENST00000488733 TRAK1Q9UPV9 953 aa27.54■■■□□ 2
ATP1A1-208ENST00000488733 RALBP1Q15311 655 aa27.53■■■□□ 2
ATP1A1-208ENST00000488733 SETD1AO15047 1707 aaKnown RBP27.52■■■□□ 2
ATP1A1-208ENST00000488733 KDM4FA0A1W2PPD8 638 aa27.52■■■□□ 2
ATP1A1-208ENST00000488733 PER1O15534 1290 aaPredicted RBP27.52■■■□□ 2
ATP1A1-208ENST00000488733 BCANQ96GW7 911 aa27.52■■■□□ 2
ATP1A1-208ENST00000488733 YTHDC2Q9H6S0 1430 aaKnown RBP27.5■■□□□ 1.99
ATP1A1-208ENST00000488733 PANK3Q9H999 370 aa27.5■■□□□ 1.99
ATP1A1-208ENST00000488733 MRS2Q9HD23 443 aa27.5■■□□□ 1.99
ATP1A1-208ENST00000488733 ADAMTS13Q76LX8 1427 aa27.48■■□□□ 1.99
ATP1A1-208ENST00000488733 STK26Q9P289 416 aa27.47■■□□□ 1.99
ATP1A1-208ENST00000488733 ARHGEF28Q8N1W1 1705 aaKnown RBP27.46■■□□□ 1.99
ATP1A1-208ENST00000488733 METP08581 1390 aa27.46■■□□□ 1.99
ATP1A1-208ENST00000488733 QRICH2Q9H0J4 1663 aa27.46■■□□□ 1.99
ATP1A1-208ENST00000488733 CCDC184Q52MB2 194 aa27.44■■□□□ 1.98
ATP1A1-208ENST00000488733 LRPPRCP42704 1394 aaKnown RBP27.44■■□□□ 1.98
ATP1A1-208ENST00000488733 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
ATP1A1-208ENST00000488733 MED14O60244 1454 aa27.43■■□□□ 1.98
ATP1A1-208ENST00000488733 MYBBP1AQ9BQG0 1328 aaKnown RBP27.43■■□□□ 1.98
ATP1A1-208ENST00000488733 PARD3Q8TEW0 1356 aa27.42■■□□□ 1.98
ATP1A1-208ENST00000488733 PUS7Q96PZ0 661 aaKnown RBP27.41■■□□□ 1.98
ATP1A1-208ENST00000488733 MYOM1P52179 1685 aa27.41■■□□□ 1.98
ATP1A1-208ENST00000488733 ABCC11Q96J66 1382 aa27.39■■□□□ 1.98
ATP1A1-208ENST00000488733 DLC1Q96QB1 1528 aa27.39■■□□□ 1.98
ATP1A1-208ENST00000488733 CNGB1Q14028 1251 aaPredicted RBP27.39■■□□□ 1.98
ATP1A1-208ENST00000488733 SLC26A8Q96RN1 970 aa27.39■■□□□ 1.98
ATP1A1-208ENST00000488733 DIP2AQ14689 1571 aa27.39■■□□□ 1.97
ATP1A1-208ENST00000488733 KNSTRNQ9Y448 316 aa27.38■■□□□ 1.97
ATP1A1-208ENST00000488733 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
ATP1A1-208ENST00000488733 BRD4O60885 1362 aaPredicted RBP27.37■■□□□ 1.97
ATP1A1-208ENST00000488733 PRAM1Q96QH2 718 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms