RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 ADGRB3O60242 1522 aa21.43■■□□□ 1.02
NR1H3-224ENST00000487913 KANK1Q14678 1352 aa21.42■■□□□ 1.02
NR1H3-224ENST00000487913 CDK12Q9NYV4 1490 aaPredicted RBP21.41■■□□□ 1.02
NR1H3-224ENST00000487913 NOS1P29475 1434 aa21.4■■□□□ 1.02
NR1H3-224ENST00000487913 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
NR1H3-224ENST00000487913 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-224ENST00000487913 LMTK2Q8IWU2 1503 aa21.39■■□□□ 1.01
NR1H3-224ENST00000487913 NUTM2BA6NNL0 878 aaPredicted RBP21.38■■□□□ 1.01
NR1H3-224ENST00000487913 NUTM2EB1AL46 878 aaPredicted RBP21.38■■□□□ 1.01
NR1H3-224ENST00000487913 NUTM2AQ8IVF1 878 aaPredicted RBP21.38■■□□□ 1.01
NR1H3-224ENST00000487913 ABCC5O15440 1437 aa21.38■■□□□ 1.01
NR1H3-224ENST00000487913 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
NR1H3-224ENST00000487913 ZFYVE9O95405 1425 aa21.37■■□□□ 1.01
NR1H3-224ENST00000487913 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
NR1H3-224ENST00000487913 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
NR1H3-224ENST00000487913 KANK4Q5T7N3 995 aaPredicted RBP21.36■■□□□ 1.01
NR1H3-224ENST00000487913 AFF2P51816 1311 aa21.35■■□□□ 1.01
NR1H3-224ENST00000487913 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
NR1H3-224ENST00000487913 SLC52A1Q9NWF4 448 aa21.34■■□□□ 1.01
NR1H3-224ENST00000487913 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
NR1H3-224ENST00000487913 RGS12O14924 1447 aa21.33■■□□□ 1.01
NR1H3-224ENST00000487913 CADPS2Q86UW7 1296 aa21.33■■□□□ 1.01
NR1H3-224ENST00000487913 CROCC2H7BZ55 1655 aa21.32■■□□□ 1
NR1H3-224ENST00000487913 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
NR1H3-224ENST00000487913 ATF3P18847 181 aa21.32■■□□□ 1
NR1H3-224ENST00000487913 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
NR1H3-224ENST00000487913 BRINP3Q76B58 766 aa21.31■■□□□ 1
NR1H3-224ENST00000487913 C19orf44Q9H6X5 657 aa21.31■■□□□ 1
NR1H3-224ENST00000487913 TBX22Q9Y458 520 aa21.31■■□□□ 1
NR1H3-224ENST00000487913 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.31■■□□□ 1
NR1H3-224ENST00000487913 DAPK1P53355 1430 aa21.28■■□□□ 1
NR1H3-224ENST00000487913 QTRT2Q9H974 415 aaKnown RBP21.26■□□□□ 0.99
NR1H3-224ENST00000487913 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
NR1H3-224ENST00000487913 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
NR1H3-224ENST00000487913 NUTM2DQ5VT03 806 aaPredicted RBP21.25■□□□□ 0.99
NR1H3-224ENST00000487913 VPS8Q8N3P4 1428 aa21.25■□□□□ 0.99
NR1H3-224ENST00000487913 C8orf37Q96NL8 207 aa21.25■□□□□ 0.99
NR1H3-224ENST00000487913 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
NR1H3-224ENST00000487913 HDGFP51858 240 aaKnown RBP21.24■□□□□ 0.99
NR1H3-224ENST00000487913 SETD5Q9C0A6 1442 aa21.23■□□□□ 0.99
NR1H3-224ENST00000487913 TMEM131LA2VDJ0 1609 aa21.23■□□□□ 0.99
NR1H3-224ENST00000487913 MYO5BQ9ULV0 1848 aa21.23■□□□□ 0.99
NR1H3-224ENST00000487913 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
NR1H3-224ENST00000487913 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
NR1H3-224ENST00000487913 GCC2Q8IWJ2 1684 aa21.22■□□□□ 0.99
NR1H3-224ENST00000487913 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
NR1H3-224ENST00000487913 RPRD2Q5VT52 1461 aaKnown RBP21.2■□□□□ 0.98
NR1H3-224ENST00000487913 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
NR1H3-224ENST00000487913 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.19■□□□□ 0.98
NR1H3-224ENST00000487913 PTPRUQ92729 1446 aa21.19■□□□□ 0.98
NR1H3-224ENST00000487913 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
NR1H3-224ENST00000487913 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
NR1H3-224ENST00000487913 DDX17Q92841 729 aaKnown RBP21.17■□□□□ 0.98
NR1H3-224ENST00000487913 LRRC59Q96AG4 307 aaKnown RBP21.17■□□□□ 0.98
NR1H3-224ENST00000487913 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
NR1H3-224ENST00000487913 PNPLA6Q8IY17 1366 aa21.17■□□□□ 0.98
NR1H3-224ENST00000487913 DCCP43146 1447 aa21.16■□□□□ 0.98
NR1H3-224ENST00000487913 MST1RQ04912 1400 aa21.16■□□□□ 0.98
NR1H3-224ENST00000487913 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
NR1H3-224ENST00000487913 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
NR1H3-224ENST00000487913 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
NR1H3-224ENST00000487913 TRPM2O94759 1503 aa21.14■□□□□ 0.97
NR1H3-224ENST00000487913 ADAMTS2O95450 1211 aa21.13■□□□□ 0.97
NR1H3-224ENST00000487913 NGLY1Q96IV0 654 aa21.13■□□□□ 0.97
NR1H3-224ENST00000487913 EP400Q96L91 3159 aa21.1■□□□□ 0.97
NR1H3-224ENST00000487913 ADGRL2O95490 1459 aa21.08■□□□□ 0.97
NR1H3-224ENST00000487913 UNC13BO14795 1591 aa21.07■□□□□ 0.96
NR1H3-224ENST00000487913 ANKRD50Q9ULJ7 1429 aa21.07■□□□□ 0.96
NR1H3-224ENST00000487913 FOXD1Q16676 465 aa21.07■□□□□ 0.96
NR1H3-224ENST00000487913 USP21Q9UK80 565 aa21.07■□□□□ 0.96
NR1H3-224ENST00000487913 XRN1Q8IZH2 1706 aaKnown RBP21.07■□□□□ 0.96
NR1H3-224ENST00000487913 TRPC5Q9UL62 973 aaPredicted RBP21.04■□□□□ 0.96
NR1H3-224ENST00000487913 NRXN3Q9Y4C0 1643 aa21.02■□□□□ 0.96
NR1H3-224ENST00000487913 ADGRL3Q9HAR2 1447 aa21.02■□□□□ 0.96
NR1H3-224ENST00000487913 ATRNO75882 1429 aa21.01■□□□□ 0.95
NR1H3-224ENST00000487913 METP08581 1390 aa21■□□□□ 0.95
NR1H3-224ENST00000487913 E9PCH4 1651 aa21■□□□□ 0.95
NR1H3-224ENST00000487913 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
NR1H3-224ENST00000487913 CCDC125Q86Z20 511 aa20.98■□□□□ 0.95
NR1H3-224ENST00000487913 C1orf167Q5SNV9 1468 aa20.97■□□□□ 0.95
NR1H3-224ENST00000487913 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
NR1H3-224ENST00000487913 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
NR1H3-224ENST00000487913 PTCH1Q13635 1447 aa20.96■□□□□ 0.95
NR1H3-224ENST00000487913 NALCNQ8IZF0 1738 aa20.96■□□□□ 0.95
NR1H3-224ENST00000487913 LAMC1P11047 1609 aa20.94■□□□□ 0.94
NR1H3-224ENST00000487913 ORAI2Q96SN7 254 aa20.94■□□□□ 0.94
NR1H3-224ENST00000487913 APLP2Q06481 763 aa20.93■□□□□ 0.94
NR1H3-224ENST00000487913 FAM50AQ14320 339 aaKnown RBP20.93■□□□□ 0.94
NR1H3-224ENST00000487913 BCL9LQ86UU0 1499 aa20.92■□□□□ 0.94
NR1H3-224ENST00000487913 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
NR1H3-224ENST00000487913 MYOM2P54296 1465 aa20.88■□□□□ 0.93
NR1H3-224ENST00000487913 COL22A1Q8NFW1 1626 aaPredicted RBP20.88■□□□□ 0.93
NR1H3-224ENST00000487913 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
NR1H3-224ENST00000487913 DEFB132Q7Z7B7 95 aa20.87■□□□□ 0.93
NR1H3-224ENST00000487913 GJD4Q96KN9 370 aaPredicted RBP20.87■□□□□ 0.93
NR1H3-224ENST00000487913 BLMP54132 1417 aaPredicted RBP20.87■□□□□ 0.93
NR1H3-224ENST00000487913 NUP155O75694 1391 aa20.84■□□□□ 0.93
NR1H3-224ENST00000487913 ROBO2Q9HCK4 1378 aa20.83■□□□□ 0.92
NR1H3-224ENST00000487913 LRP5O75197 1615 aa20.82■□□□□ 0.92
NR1H3-224ENST00000487913 RALGAPBQ86X10 1494 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms