RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 TLL1O43897 1013 aa10.07□□□□□ -0.8
USP9X-208ENST00000487625 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
USP9X-208ENST00000487625 C11orf95C9JLR9 678 aaPredicted RBP10.06□□□□□ -0.8
USP9X-208ENST00000487625 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
USP9X-208ENST00000487625 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
USP9X-208ENST00000487625 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
USP9X-208ENST00000487625 S1PR4O95977 384 aa10.03□□□□□ -0.8
USP9X-208ENST00000487625 SWT1Q5T5J6 900 aaKnown RBP10.03□□□□□ -0.8
USP9X-208ENST00000487625 BLOC1S3Q6QNY0 202 aa10.03□□□□□ -0.8
USP9X-208ENST00000487625 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
USP9X-208ENST00000487625 PCDHB3Q9Y5E6 796 aa10.02□□□□□ -0.81
USP9X-208ENST00000487625 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
USP9X-208ENST00000487625 AVPP01185 164 aa10.01□□□□□ -0.81
USP9X-208ENST00000487625 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
USP9X-208ENST00000487625 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
USP9X-208ENST00000487625 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
USP9X-208ENST00000487625 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
USP9X-208ENST00000487625 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
USP9X-208ENST00000487625 CERKQ8TCT0 537 aa10□□□□□ -0.81
USP9X-208ENST00000487625 AXIN1O15169 862 aa9.98□□□□□ -0.81
USP9X-208ENST00000487625 TERTO14746 1132 aaKnown RBP9.96□□□□□ -0.82
USP9X-208ENST00000487625 FOXC1Q12948 553 aa9.96□□□□□ -0.82
USP9X-208ENST00000487625 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
USP9X-208ENST00000487625 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
USP9X-208ENST00000487625 CTC1Q2NKJ3 1217 aa9.93□□□□□ -0.82
USP9X-208ENST00000487625 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
USP9X-208ENST00000487625 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
USP9X-208ENST00000487625 TOR4AQ9NXH8 423 aa9.93□□□□□ -0.82
USP9X-208ENST00000487625 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
USP9X-208ENST00000487625 SNRPBP14678 240 aaKnown RBP9.92□□□□□ -0.82
USP9X-208ENST00000487625 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
USP9X-208ENST00000487625 PDIA6Q15084 440 aa9.92□□□□□ -0.82
USP9X-208ENST00000487625 FAM181BA6NEQ2 426 aa9.91□□□□□ -0.82
USP9X-208ENST00000487625 TTC13Q8NBP0 860 aa9.9□□□□□ -0.82
USP9X-208ENST00000487625 ADH1BP00325 375 aa9.88□□□□□ -0.83
USP9X-208ENST00000487625 SLC4A3P48751 1232 aa9.85□□□□□ -0.83
USP9X-208ENST00000487625 ATP13A2Q9NQ11 1180 aa9.85□□□□□ -0.83
USP9X-208ENST00000487625 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
USP9X-208ENST00000487625 CYP4X1Q8N118 509 aa9.84□□□□□ -0.83
USP9X-208ENST00000487625 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
USP9X-208ENST00000487625 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
USP9X-208ENST00000487625 ZSCAN1Q8NBB4 408 aa9.83□□□□□ -0.84
USP9X-208ENST00000487625 EYA1Q99502 592 aa9.83□□□□□ -0.84
USP9X-208ENST00000487625 ACTN4O43707 911 aaKnown RBP9.82□□□□□ -0.84
USP9X-208ENST00000487625 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
USP9X-208ENST00000487625 GMPRP36959 345 aa9.8□□□□□ -0.84
USP9X-208ENST00000487625 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
USP9X-208ENST00000487625 RPIAP49247 311 aa9.78□□□□□ -0.84
USP9X-208ENST00000487625 OSBPP22059 807 aa9.77□□□□□ -0.85
USP9X-208ENST00000487625 NPDC1Q9NQX5 325 aaPredicted RBP9.77□□□□□ -0.85
USP9X-208ENST00000487625 SENP2Q9HC62 589 aa9.76□□□□□ -0.85
USP9X-208ENST00000487625 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
USP9X-208ENST00000487625 NR1I2O75469 434 aa9.74□□□□□ -0.85
USP9X-208ENST00000487625 CFHP08603 1231 aa9.74□□□□□ -0.85
USP9X-208ENST00000487625 SMPD1P17405 629 aa9.73□□□□□ -0.85
USP9X-208ENST00000487625 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
USP9X-208ENST00000487625 TTC24A2A3L6 582 aaPredicted RBP9.72□□□□□ -0.85
USP9X-208ENST00000487625 CD2BP2O95400 341 aaKnown RBP9.7□□□□□ -0.86
USP9X-208ENST00000487625 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
USP9X-208ENST00000487625 NXF1Q9UBU9 619 aaKnown RBP9.69□□□□□ -0.86
USP9X-208ENST00000487625 FCF1Q9Y324 198 aaKnown RBP9.69□□□□□ -0.86
USP9X-208ENST00000487625 DNAJB2P25686 324 aa9.68□□□□□ -0.86
USP9X-208ENST00000487625 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
USP9X-208ENST00000487625 TMEM134Q9H6X4 195 aa9.68□□□□□ -0.86
USP9X-208ENST00000487625 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
USP9X-208ENST00000487625 SPSB2Q99619 263 aa9.67□□□□□ -0.86
USP9X-208ENST00000487625 SLC10A3P09131 477 aa9.66□□□□□ -0.86
USP9X-208ENST00000487625 IRF7Q92985 503 aa9.66□□□□□ -0.86
USP9X-208ENST00000487625 GSK3AP49840 483 aa9.65□□□□□ -0.86
USP9X-208ENST00000487625 ERBB4Q15303 1308 aa9.64□□□□□ -0.87
USP9X-208ENST00000487625 SNIP1Q8TAD8 396 aaKnown RBP9.64□□□□□ -0.87
USP9X-208ENST00000487625 J3QL48 77 aa9.63□□□□□ -0.87
USP9X-208ENST00000487625 VEGFBP49765 207 aa9.63□□□□□ -0.87
USP9X-208ENST00000487625 WNT7AO00755 349 aa9.62□□□□□ -0.87
USP9X-208ENST00000487625 PUS10Q3MIT2 529 aaKnown RBP9.62□□□□□ -0.87
USP9X-208ENST00000487625 HPS1Q92902 700 aa9.62□□□□□ -0.87
USP9X-208ENST00000487625 NPAS3Q8IXF0 933 aa9.61□□□□□ -0.87
USP9X-208ENST00000487625 H3BM21 787 aa9.6□□□□□ -0.87
USP9X-208ENST00000487625 KCNMA1Q12791 1236 aa9.6□□□□□ -0.87
USP9X-208ENST00000487625 ARIH1Q9Y4X5 557 aaPredicted RBP9.59□□□□□ -0.87
USP9X-208ENST00000487625 RCCD1A6NED2 376 aa9.57□□□□□ -0.88
USP9X-208ENST00000487625 MRGPRX2Q96LB1 330 aa9.57□□□□□ -0.88
USP9X-208ENST00000487625 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
USP9X-208ENST00000487625 RBM46Q8TBY0 533 aaKnown RBP9.55□□□□□ -0.88
USP9X-208ENST00000487625 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
USP9X-208ENST00000487625 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
USP9X-208ENST00000487625 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
USP9X-208ENST00000487625 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
USP9X-208ENST00000487625 E2F4Q16254 413 aa9.51□□□□□ -0.89
USP9X-208ENST00000487625 TRIM32Q13049 653 aa9.5□□□□□ -0.89
USP9X-208ENST00000487625 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
USP9X-208ENST00000487625 XP32Q5T750 250 aa9.5□□□□□ -0.89
USP9X-208ENST00000487625 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
USP9X-208ENST00000487625 BMP1P13497 986 aa9.49□□□□□ -0.89
USP9X-208ENST00000487625 MORN1Q5T089 497 aa9.48□□□□□ -0.89
USP9X-208ENST00000487625 TMEM151AQ8N4L1 468 aa9.48□□□□□ -0.89
USP9X-208ENST00000487625 GDF11O95390 407 aa9.45□□□□□ -0.9
USP9X-208ENST00000487625 RASSF7Q02833 373 aa9.45□□□□□ -0.9
USP9X-208ENST00000487625 PTGDRQ13258 359 aa9.45□□□□□ -0.9
USP9X-208ENST00000487625 KRTAP4-8Q9BYQ9 185 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms