RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 NLRP1Q9C000 1473 aa11.39□□□□□ -0.59
RBM28-206ENST00000487602 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
RBM28-206ENST00000487602 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
RBM28-206ENST00000487602 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
RBM28-206ENST00000487602 UBR1Q8IWV7 1749 aa11.39□□□□□ -0.59
RBM28-206ENST00000487602 CEP170BQ9Y4F5 1589 aaPredicted RBP11.39□□□□□ -0.59
RBM28-206ENST00000487602 ADGRF5Q8IZF2 1346 aa11.38□□□□□ -0.59
RBM28-206ENST00000487602 IFT172Q9UG01 1749 aa11.38□□□□□ -0.59
RBM28-206ENST00000487602 MYO5BQ9ULV0 1848 aa11.38□□□□□ -0.59
RBM28-206ENST00000487602 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
RBM28-206ENST00000487602 MYOM2P54296 1465 aa11.37□□□□□ -0.59
RBM28-206ENST00000487602 ZFYVE9O95405 1425 aa11.36□□□□□ -0.59
RBM28-206ENST00000487602 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
RBM28-206ENST00000487602 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
RBM28-206ENST00000487602 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
RBM28-206ENST00000487602 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
RBM28-206ENST00000487602 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
RBM28-206ENST00000487602 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
RBM28-206ENST00000487602 THEMISQ8N1K5 641 aaPredicted RBP11.35□□□□□ -0.59
RBM28-206ENST00000487602 NRXN1Q9ULB1 1477 aa11.35□□□□□ -0.59
RBM28-206ENST00000487602 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
RBM28-206ENST00000487602 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
RBM28-206ENST00000487602 RALGAPBQ86X10 1494 aa11.34□□□□□ -0.59
RBM28-206ENST00000487602 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
RBM28-206ENST00000487602 PPLO60437 1756 aa11.33□□□□□ -0.59
RBM28-206ENST00000487602 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
RBM28-206ENST00000487602 TMEM2Q9UHN6 1383 aa11.33□□□□□ -0.6
RBM28-206ENST00000487602 POLR1AO95602 1720 aaPredicted RBP11.33□□□□□ -0.6
RBM28-206ENST00000487602 ZNF316A6NFI3 1004 aaPredicted RBP11.33□□□□□ -0.6
RBM28-206ENST00000487602 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
RBM28-206ENST00000487602 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
RBM28-206ENST00000487602 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
RBM28-206ENST00000487602 GPRASP1Q5JY77 1395 aa11.32□□□□□ -0.6
RBM28-206ENST00000487602 PIK3C2GO75747 1445 aa11.32□□□□□ -0.6
RBM28-206ENST00000487602 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
RBM28-206ENST00000487602 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
RBM28-206ENST00000487602 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
RBM28-206ENST00000487602 LTKP29376 864 aa11.3□□□□□ -0.6
RBM28-206ENST00000487602 EID1Q9Y6B2 187 aa11.3□□□□□ -0.6
RBM28-206ENST00000487602 ARHGAP23Q9P227 1491 aa11.3□□□□□ -0.6
RBM28-206ENST00000487602 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
RBM28-206ENST00000487602 SLIT1O75093 1534 aa11.29□□□□□ -0.6
RBM28-206ENST00000487602 LMTK3Q96Q04 1460 aa11.28□□□□□ -0.6
RBM28-206ENST00000487602 HIRIP3Q9BW71 556 aaPredicted RBP11.28□□□□□ -0.6
RBM28-206ENST00000487602 KIAA1210Q9ULL0 1709 aa11.28□□□□□ -0.6
RBM28-206ENST00000487602 USP47Q96K76 1375 aa11.28□□□□□ -0.6
RBM28-206ENST00000487602 LAMC1P11047 1609 aa11.27□□□□□ -0.6
RBM28-206ENST00000487602 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.61
RBM28-206ENST00000487602 PLEKHG1Q9ULL1 1385 aa11.27□□□□□ -0.61
RBM28-206ENST00000487602 TMEM132EQ6IEE7 984 aa11.26□□□□□ -0.61
RBM28-206ENST00000487602 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
RBM28-206ENST00000487602 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
RBM28-206ENST00000487602 BCANQ96GW7 911 aa11.25□□□□□ -0.61
RBM28-206ENST00000487602 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
RBM28-206ENST00000487602 SETBP1Q9Y6X0 1596 aa11.24□□□□□ -0.61
RBM28-206ENST00000487602 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
RBM28-206ENST00000487602 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
RBM28-206ENST00000487602 TBX22Q9Y458 520 aa11.23□□□□□ -0.61
RBM28-206ENST00000487602 NRXN3Q9Y4C0 1643 aa11.23□□□□□ -0.61
RBM28-206ENST00000487602 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
RBM28-206ENST00000487602 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
RBM28-206ENST00000487602 ADAMTS13Q76LX8 1427 aa11.22□□□□□ -0.61
RBM28-206ENST00000487602 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
RBM28-206ENST00000487602 MED14O60244 1454 aa11.21□□□□□ -0.61
RBM28-206ENST00000487602 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.61
RBM28-206ENST00000487602 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.61
RBM28-206ENST00000487602 STK26Q9P289 416 aa11.21□□□□□ -0.61
RBM28-206ENST00000487602 ASXL1Q8IXJ9 1541 aa11.2□□□□□ -0.62
RBM28-206ENST00000487602 YTHDC2Q9H6S0 1430 aaKnown RBP11.2□□□□□ -0.62
RBM28-206ENST00000487602 METP08581 1390 aa11.2□□□□□ -0.62
RBM28-206ENST00000487602 LRPPRCP42704 1394 aaKnown RBP11.2□□□□□ -0.62
RBM28-206ENST00000487602 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
RBM28-206ENST00000487602 TESK2Q96S53 571 aa11.2□□□□□ -0.62
RBM28-206ENST00000487602 ABCC11Q96J66 1382 aa11.19□□□□□ -0.62
RBM28-206ENST00000487602 STRCQ7RTU9 1775 aa11.19□□□□□ -0.62
RBM28-206ENST00000487602 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
RBM28-206ENST00000487602 HSPA2P54652 639 aa11.19□□□□□ -0.62
RBM28-206ENST00000487602 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
RBM28-206ENST00000487602 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
RBM28-206ENST00000487602 SIRT1Q96EB6 747 aa11.18□□□□□ -0.62
RBM28-206ENST00000487602 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
RBM28-206ENST00000487602 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
RBM28-206ENST00000487602 TMF1P82094 1093 aa11.17□□□□□ -0.62
RBM28-206ENST00000487602 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
RBM28-206ENST00000487602 KIF7Q2M1P5 1343 aa11.16□□□□□ -0.62
RBM28-206ENST00000487602 KNDC1Q76NI1 1749 aa11.16□□□□□ -0.62
RBM28-206ENST00000487602 POGKQ9P215 609 aa11.16□□□□□ -0.62
RBM28-206ENST00000487602 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
RBM28-206ENST00000487602 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
RBM28-206ENST00000487602 DLC1Q96QB1 1528 aa11.15□□□□□ -0.62
RBM28-206ENST00000487602 PRAM1Q96QH2 718 aa11.15□□□□□ -0.62
RBM28-206ENST00000487602 AMOTL2Q9Y2J4 779 aa11.15□□□□□ -0.62
RBM28-206ENST00000487602 PTPRUQ92729 1446 aa11.15□□□□□ -0.62
RBM28-206ENST00000487602 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
RBM28-206ENST00000487602 DDX10Q13206 875 aaKnown RBP11.14□□□□□ -0.63
RBM28-206ENST00000487602 WAPLQ7Z5K2 1190 aa11.14□□□□□ -0.63
RBM28-206ENST00000487602 TECPR2O15040 1411 aa11.14□□□□□ -0.63
RBM28-206ENST00000487602 XRN1Q8IZH2 1706 aaKnown RBP11.13□□□□□ -0.63
RBM28-206ENST00000487602 NWD1Q149M9 1564 aa11.13□□□□□ -0.63
RBM28-206ENST00000487602 FAM135BQ49AJ0 1406 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms