RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 JCADQ9P266 1359 aa23.58■■□□□ 1.37
PFDN4-204ENST00000487129 FGD6Q6ZV73 1430 aa23.58■■□□□ 1.36
PFDN4-204ENST00000487129 LRP6O75581 1613 aa23.56■■□□□ 1.36
PFDN4-204ENST00000487129 LOC105371045A0A1W2PR82 267 aa23.56■■□□□ 1.36
PFDN4-204ENST00000487129 ANKRD30AQ9BXX3 1397 aa23.55■■□□□ 1.36
PFDN4-204ENST00000487129 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
PFDN4-204ENST00000487129 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
PFDN4-204ENST00000487129 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
PFDN4-204ENST00000487129 CHIC2Q9UKJ5 165 aa23.53■■□□□ 1.36
PFDN4-204ENST00000487129 RPRD2Q5VT52 1461 aaKnown RBP23.52■■□□□ 1.36
PFDN4-204ENST00000487129 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
PFDN4-204ENST00000487129 MYO5BQ9ULV0 1848 aa23.5■■□□□ 1.35
PFDN4-204ENST00000487129 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
PFDN4-204ENST00000487129 TMEM131LA2VDJ0 1609 aa23.49■■□□□ 1.35
PFDN4-204ENST00000487129 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
PFDN4-204ENST00000487129 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
PFDN4-204ENST00000487129 ADAMTS13Q76LX8 1427 aa23.47■■□□□ 1.35
PFDN4-204ENST00000487129 AHDC1Q5TGY3 1603 aaPredicted RBP23.47■■□□□ 1.35
PFDN4-204ENST00000487129 SPATA31A6Q5VVP1 1343 aa23.46■■□□□ 1.35
PFDN4-204ENST00000487129 BCANQ96GW7 911 aa23.45■■□□□ 1.34
PFDN4-204ENST00000487129 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
PFDN4-204ENST00000487129 UPF1Q92900 1129 aaKnown RBP eCLIP23.44■■□□□ 1.34
PFDN4-204ENST00000487129 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
PFDN4-204ENST00000487129 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.42■■□□□ 1.34
PFDN4-204ENST00000487129 ANKRD50Q9ULJ7 1429 aa23.42■■□□□ 1.34
PFDN4-204ENST00000487129 DIP2AQ14689 1571 aa23.41■■□□□ 1.34
PFDN4-204ENST00000487129 PPP1R15AO75807 674 aaPredicted RBP23.39■■□□□ 1.33
PFDN4-204ENST00000487129 ZNF772Q68DY9 489 aaPredicted RBP23.38■■□□□ 1.33
PFDN4-204ENST00000487129 CADPS2Q86UW7 1296 aa23.37■■□□□ 1.33
PFDN4-204ENST00000487129 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
PFDN4-204ENST00000487129 C19orf44Q9H6X5 657 aa23.36■■□□□ 1.33
PFDN4-204ENST00000487129 UNC13BO14795 1591 aa23.35■■□□□ 1.33
PFDN4-204ENST00000487129 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
PFDN4-204ENST00000487129 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
PFDN4-204ENST00000487129 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
PFDN4-204ENST00000487129 BRINP3Q76B58 766 aa23.34■■□□□ 1.33
PFDN4-204ENST00000487129 E9PCH4 1651 aa23.33■■□□□ 1.33
PFDN4-204ENST00000487129 CDK12Q9NYV4 1490 aaPredicted RBP23.33■■□□□ 1.33
PFDN4-204ENST00000487129 MEX3CQ5U5Q3 659 aaKnown RBP23.33■■□□□ 1.33
PFDN4-204ENST00000487129 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
PFDN4-204ENST00000487129 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.33■■□□□ 1.33
PFDN4-204ENST00000487129 C14orf37Q86TY3 774 aa23.32■■□□□ 1.32
PFDN4-204ENST00000487129 ATF3P18847 181 aa23.3■■□□□ 1.32
PFDN4-204ENST00000487129 APLP2Q06481 763 aa23.3■■□□□ 1.32
PFDN4-204ENST00000487129 DCCP43146 1447 aa23.3■■□□□ 1.32
PFDN4-204ENST00000487129 TRPM2O94759 1503 aa23.29■■□□□ 1.32
PFDN4-204ENST00000487129 ASXL1Q8IXJ9 1541 aa23.29■■□□□ 1.32
PFDN4-204ENST00000487129 SETD5Q9C0A6 1442 aa23.28■■□□□ 1.32
PFDN4-204ENST00000487129 RXRBP28702 533 aa23.28■■□□□ 1.32
PFDN4-204ENST00000487129 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
PFDN4-204ENST00000487129 NRXN3Q9Y4C0 1643 aa23.27■■□□□ 1.32
PFDN4-204ENST00000487129 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
PFDN4-204ENST00000487129 AMOTL2Q9Y2J4 779 aa23.27■■□□□ 1.32
PFDN4-204ENST00000487129 MST1RQ04912 1400 aa23.26■■□□□ 1.31
PFDN4-204ENST00000487129 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
PFDN4-204ENST00000487129 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
PFDN4-204ENST00000487129 IQGAP3Q86VI3 1631 aa23.25■■□□□ 1.31
PFDN4-204ENST00000487129 AFF2P51816 1311 aa23.24■■□□□ 1.31
PFDN4-204ENST00000487129 NUTM2BA6NNL0 878 aaPredicted RBP23.23■■□□□ 1.31
PFDN4-204ENST00000487129 NUTM2EB1AL46 878 aaPredicted RBP23.23■■□□□ 1.31
PFDN4-204ENST00000487129 NUTM2AQ8IVF1 878 aaPredicted RBP23.23■■□□□ 1.31
PFDN4-204ENST00000487129 RGS12O14924 1447 aa23.22■■□□□ 1.31
PFDN4-204ENST00000487129 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
PFDN4-204ENST00000487129 SRCAPQ6ZRS2 3230 aa23.2■■□□□ 1.3
PFDN4-204ENST00000487129 METP08581 1390 aa23.17■■□□□ 1.3
PFDN4-204ENST00000487129 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
PFDN4-204ENST00000487129 PNPLA6Q8IY17 1366 aa23.17■■□□□ 1.3
PFDN4-204ENST00000487129 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
PFDN4-204ENST00000487129 ADGRL3Q9HAR2 1447 aa23.15■■□□□ 1.3
PFDN4-204ENST00000487129 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
PFDN4-204ENST00000487129 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
PFDN4-204ENST00000487129 C8orf37Q96NL8 207 aa23.12■■□□□ 1.29
PFDN4-204ENST00000487129 NUP155O75694 1391 aa23.12■■□□□ 1.29
PFDN4-204ENST00000487129 RBM6P78332 1123 aaKnown RBP23.11■■□□□ 1.29
PFDN4-204ENST00000487129 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
PFDN4-204ENST00000487129 LAMC1P11047 1609 aa23.1■■□□□ 1.29
PFDN4-204ENST00000487129 C1orf167Q5SNV9 1468 aa23.07■■□□□ 1.28
PFDN4-204ENST00000487129 SPHKAPQ2M3C7 1700 aa23.07■■□□□ 1.28
PFDN4-204ENST00000487129 NEXMIFQ5QGS0 1516 aa23.07■■□□□ 1.28
PFDN4-204ENST00000487129 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
PFDN4-204ENST00000487129 CLTCL1P53675 1640 aa23.01■■□□□ 1.27
PFDN4-204ENST00000487129 ADAMTS2O95450 1211 aa23.01■■□□□ 1.27
PFDN4-204ENST00000487129 PTCH1Q13635 1447 aa23■■□□□ 1.27
PFDN4-204ENST00000487129 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
PFDN4-204ENST00000487129 ATAD2Q6PL18 1390 aa22.99■■□□□ 1.27
PFDN4-204ENST00000487129 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
PFDN4-204ENST00000487129 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
PFDN4-204ENST00000487129 ROBO2Q9HCK4 1378 aa22.98■■□□□ 1.27
PFDN4-204ENST00000487129 FNBP4Q8N3X1 1017 aaPredicted RBP22.97■■□□□ 1.27
PFDN4-204ENST00000487129 ORAI2Q96SN7 254 aa22.97■■□□□ 1.27
PFDN4-204ENST00000487129 ATRNO75882 1429 aa22.97■■□□□ 1.27
PFDN4-204ENST00000487129 EP400Q96L91 3159 aa22.97■■□□□ 1.27
PFDN4-204ENST00000487129 COL22A1Q8NFW1 1626 aaPredicted RBP22.97■■□□□ 1.27
PFDN4-204ENST00000487129 MYOM2P54296 1465 aa22.94■■□□□ 1.26
PFDN4-204ENST00000487129 USP21Q9UK80 565 aa22.94■■□□□ 1.26
PFDN4-204ENST00000487129 TRPC5Q9UL62 973 aaPredicted RBP22.93■■□□□ 1.26
PFDN4-204ENST00000487129 BCL9LQ86UU0 1499 aa22.91■■□□□ 1.26
PFDN4-204ENST00000487129 ITGAEP38570 1179 aa22.9■■□□□ 1.26
PFDN4-204ENST00000487129 PXDNQ92626 1479 aa22.88■■□□□ 1.25
PFDN4-204ENST00000487129 KIF1BO60333 1816 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms