RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 SLC52A1Q9NWF4 448 aa14.56□□□□□ -0.08
CCDC142-208ENST00000486335 FGD6Q6ZV73 1430 aa14.56□□□□□ -0.08
CCDC142-208ENST00000486335 ZNF772Q68DY9 489 aaPredicted RBP14.55□□□□□ -0.08
CCDC142-208ENST00000486335 TBX22Q9Y458 520 aa14.55□□□□□ -0.08
CCDC142-208ENST00000486335 PLEKHG1Q9ULL1 1385 aa14.55□□□□□ -0.08
CCDC142-208ENST00000486335 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
CCDC142-208ENST00000486335 ADGRB3O60242 1522 aa14.54□□□□□ -0.08
CCDC142-208ENST00000486335 CHD2O14647 1828 aaKnown RBP14.53□□□□□ -0.08
CCDC142-208ENST00000486335 DAPK1P53355 1430 aa14.53□□□□□ -0.08
CCDC142-208ENST00000486335 ADAMTS13Q76LX8 1427 aa14.53□□□□□ -0.08
CCDC142-208ENST00000486335 NCOA3Q9Y6Q9 1424 aa14.53□□□□□ -0.08
CCDC142-208ENST00000486335 RXRBP28702 533 aa14.53□□□□□ -0.08
CCDC142-208ENST00000486335 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
CCDC142-208ENST00000486335 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
CCDC142-208ENST00000486335 BRINP3Q76B58 766 aa14.52□□□□□ -0.09
CCDC142-208ENST00000486335 RIMS2Q9UQ26 1411 aa14.51□□□□□ -0.09
CCDC142-208ENST00000486335 KANK1Q14678 1352 aa14.51□□□□□ -0.09
CCDC142-208ENST00000486335 BCANQ96GW7 911 aa14.51□□□□□ -0.09
CCDC142-208ENST00000486335 C19orf44Q9H6X5 657 aa14.51□□□□□ -0.09
CCDC142-208ENST00000486335 AHDC1Q5TGY3 1603 aaPredicted RBP14.51□□□□□ -0.09
CCDC142-208ENST00000486335 DIP2AQ14689 1571 aa14.51□□□□□ -0.09
CCDC142-208ENST00000486335 PTPRUQ92729 1446 aa14.49□□□□□ -0.09
CCDC142-208ENST00000486335 MEX3CQ5U5Q3 659 aaKnown RBP14.49□□□□□ -0.09
CCDC142-208ENST00000486335 NUTM2DQ5VT03 806 aaPredicted RBP14.49□□□□□ -0.09
CCDC142-208ENST00000486335 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
CCDC142-208ENST00000486335 CDK12Q9NYV4 1490 aaPredicted RBP14.48□□□□□ -0.09
CCDC142-208ENST00000486335 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
CCDC142-208ENST00000486335 AFF2P51816 1311 aa14.47□□□□□ -0.09
CCDC142-208ENST00000486335 NUTM2BA6NNL0 878 aaPredicted RBP14.47□□□□□ -0.09
CCDC142-208ENST00000486335 NUTM2EB1AL46 878 aaPredicted RBP14.47□□□□□ -0.09
CCDC142-208ENST00000486335 NUTM2AQ8IVF1 878 aaPredicted RBP14.47□□□□□ -0.09
CCDC142-208ENST00000486335 PTPN23Q9H3S7 1636 aa14.47□□□□□ -0.09
CCDC142-208ENST00000486335 ANKRD30AQ9BXX3 1397 aa14.47□□□□□ -0.09
CCDC142-208ENST00000486335 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.46□□□□□ -0.09
CCDC142-208ENST00000486335 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
CCDC142-208ENST00000486335 TMEM131LA2VDJ0 1609 aa14.46□□□□□ -0.09
CCDC142-208ENST00000486335 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
CCDC142-208ENST00000486335 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
CCDC142-208ENST00000486335 RGS12O14924 1447 aa14.44□□□□□ -0.1
CCDC142-208ENST00000486335 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
CCDC142-208ENST00000486335 ATF3P18847 181 aa14.44□□□□□ -0.1
CCDC142-208ENST00000486335 DDX17Q92841 729 aaKnown RBP14.44□□□□□ -0.1
CCDC142-208ENST00000486335 RPRD2Q5VT52 1461 aaKnown RBP14.44□□□□□ -0.1
CCDC142-208ENST00000486335 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
CCDC142-208ENST00000486335 QTRT2Q9H974 415 aaKnown RBP14.43□□□□□ -0.1
CCDC142-208ENST00000486335 PIK3R4Q99570 1358 aa14.43□□□□□ -0.1
CCDC142-208ENST00000486335 C14orf37Q86TY3 774 aa14.42□□□□□ -0.1
CCDC142-208ENST00000486335 HDGFP51858 240 aaKnown RBP14.41□□□□□ -0.1
CCDC142-208ENST00000486335 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC142-208ENST00000486335 ADGRL2O95490 1459 aa14.41□□□□□ -0.1
CCDC142-208ENST00000486335 MST1RQ04912 1400 aa14.41□□□□□ -0.1
CCDC142-208ENST00000486335 RBM6P78332 1123 aaKnown RBP14.4□□□□□ -0.1
CCDC142-208ENST00000486335 ASXL1Q8IXJ9 1541 aa14.39□□□□□ -0.11
CCDC142-208ENST00000486335 ANKRD50Q9ULJ7 1429 aa14.39□□□□□ -0.11
CCDC142-208ENST00000486335 GCC2Q8IWJ2 1684 aa14.39□□□□□ -0.11
CCDC142-208ENST00000486335 PNPLA6Q8IY17 1366 aa14.38□□□□□ -0.11
CCDC142-208ENST00000486335 CHGAP10645 457 aaKnown RBP14.38□□□□□ -0.11
CCDC142-208ENST00000486335 C8orf37Q96NL8 207 aa14.38□□□□□ -0.11
CCDC142-208ENST00000486335 LRRC59Q96AG4 307 aaKnown RBP14.37□□□□□ -0.11
CCDC142-208ENST00000486335 METP08581 1390 aa14.36□□□□□ -0.11
CCDC142-208ENST00000486335 DCCP43146 1447 aa14.36□□□□□ -0.11
CCDC142-208ENST00000486335 NHSL1Q5SYE7 1610 aa14.33□□□□□ -0.11
CCDC142-208ENST00000486335 NRXN3Q9Y4C0 1643 aa14.33□□□□□ -0.11
CCDC142-208ENST00000486335 TRPM2O94759 1503 aa14.33□□□□□ -0.12
CCDC142-208ENST00000486335 UNC13BO14795 1591 aa14.32□□□□□ -0.12
CCDC142-208ENST00000486335 ADAMTS2O95450 1211 aa14.32□□□□□ -0.12
CCDC142-208ENST00000486335 FNBP4Q8N3X1 1017 aaPredicted RBP14.32□□□□□ -0.12
CCDC142-208ENST00000486335 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
CCDC142-208ENST00000486335 E9PCH4 1651 aa14.31□□□□□ -0.12
CCDC142-208ENST00000486335 NGLY1Q96IV0 654 aa14.31□□□□□ -0.12
CCDC142-208ENST00000486335 SETBP1Q9Y6X0 1596 aa14.3□□□□□ -0.12
CCDC142-208ENST00000486335 EP400Q96L91 3159 aa14.3□□□□□ -0.12
CCDC142-208ENST00000486335 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
CCDC142-208ENST00000486335 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
CCDC142-208ENST00000486335 ORAI2Q96SN7 254 aa14.29□□□□□ -0.12
CCDC142-208ENST00000486335 C1orf167Q5SNV9 1468 aa14.28□□□□□ -0.12
CCDC142-208ENST00000486335 ADGRL3Q9HAR2 1447 aa14.28□□□□□ -0.12
CCDC142-208ENST00000486335 ATRNO75882 1429 aa14.27□□□□□ -0.12
CCDC142-208ENST00000486335 ATAD2Q6PL18 1390 aa14.27□□□□□ -0.12
CCDC142-208ENST00000486335 USP21Q9UK80 565 aa14.27□□□□□ -0.13
CCDC142-208ENST00000486335 TRPC5Q9UL62 973 aaPredicted RBP14.26□□□□□ -0.13
CCDC142-208ENST00000486335 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
CCDC142-208ENST00000486335 BCL9LQ86UU0 1499 aa14.25□□□□□ -0.13
CCDC142-208ENST00000486335 LAMC1P11047 1609 aa14.24□□□□□ -0.13
CCDC142-208ENST00000486335 NUP155O75694 1391 aa14.23□□□□□ -0.13
CCDC142-208ENST00000486335 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
CCDC142-208ENST00000486335 APLP2Q06481 763 aa14.23□□□□□ -0.13
CCDC142-208ENST00000486335 IQGAP3Q86VI3 1631 aa14.22□□□□□ -0.13
CCDC142-208ENST00000486335 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
CCDC142-208ENST00000486335 NALCNQ8IZF0 1738 aa14.21□□□□□ -0.13
CCDC142-208ENST00000486335 PTCH1Q13635 1447 aa14.21□□□□□ -0.13
CCDC142-208ENST00000486335 MYOM2P54296 1465 aa14.2□□□□□ -0.14
CCDC142-208ENST00000486335 CCDC125Q86Z20 511 aa14.19□□□□□ -0.14
CCDC142-208ENST00000486335 GJD4Q96KN9 370 aaPredicted RBP14.19□□□□□ -0.14
CCDC142-208ENST00000486335 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
CCDC142-208ENST00000486335 NEXMIFQ5QGS0 1516 aa14.18□□□□□ -0.14
CCDC142-208ENST00000486335 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
CCDC142-208ENST00000486335 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
CCDC142-208ENST00000486335 PXDNQ92626 1479 aa14.15□□□□□ -0.14
CCDC142-208ENST00000486335 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms